EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000004667 (Gene tree)
Gene ID: 424444
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 43375 bases
Position: chr8:7948738-7992112
Accession: 424444
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000054235	EST1	PF10374.9	7.1e-25	1	1
ENSGALP00000054235	EST1_DNA_bind	PF10373.9	2e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000072949	SMG7-201	3433	-	ENSGALP00000054235	1141 (aa)	XP_015146033	A0A1D5PMZ7

Gene Model

Click here to download ENSGALG00000004667's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000004667's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000004667	SMG7	100	89.161	ENSG00000116698	SMG7	100	89.336	Homo_sapiens
ENSGALG00000004667	SMG7	89	74.551	ENSAPOG00000009611	smg7	96	74.551	Acanthochromis_polyacanthus
ENSGALG00000004667	SMG7	99	88.820	ENSAMEG00000002357	SMG7	99	88.908	Ailuropoda_melanoleuca
ENSGALG00000004667	SMG7	97	64.559	ENSACIG00000015152	smg7	100	64.203	Amphilophus_citrinellus
ENSGALG00000004667	SMG7	99	66.183	ENSAOCG00000013538	smg7	99	66.326	Amphiprion_ocellaris
ENSGALG00000004667	SMG7	99	66.154	ENSAPEG00000007851	smg7	99	66.297	Amphiprion_percula
ENSGALG00000004667	SMG7	99	65.511	ENSATEG00000006931	smg7	99	65.590	Anabas_testudineus
ENSGALG00000004667	SMG7	99	97.797	ENSAPLG00000015811	SMG7	99	97.797	Anas_platyrhynchos
ENSGALG00000004667	SMG7	100	84.808	ENSACAG00000014989	SMG7	100	85.309	Anolis_carolinensis
ENSGALG00000004667	SMG7	100	89.589	ENSANAG00000028114	SMG7	100	89.764	Aotus_nancymaae
ENSGALG00000004667	SMG7	99	65.753	ENSACLG00000022079	smg7	93	72.000	Astatotilapia_calliptera
ENSGALG00000004667	SMG7	99	68.951	ENSAMXG00000020809	smg7	99	67.554	Astyanax_mexicanus
ENSGALG00000004667	SMG7	100	88.112	ENSBTAG00000008003	SMG7	100	88.287	Bos_taurus
ENSGALG00000004667	SMG7	100	89.326	ENSCJAG00000005135	SMG7	100	88.976	Callithrix_jacchus
ENSGALG00000004667	SMG7	99	82.125	ENSCAFG00000013276	SMG7	97	81.703	Canis_familiaris
ENSGALG00000004667	SMG7	99	88.664	ENSCAFG00020015475	SMG7	99	88.303	Canis_lupus_dingo
ENSGALG00000004667	SMG7	99	81.466	ENSCHIG00000018192	SMG7	99	81.550	Capra_hircus
ENSGALG00000004667	SMG7	100	89.073	ENSTSYG00000002667	SMG7	100	89.073	Carlito_syrichta
ENSGALG00000004667	SMG7	99	81.872	ENSCPOG00000008906	SMG7	99	81.029	Cavia_porcellus
ENSGALG00000004667	SMG7	100	89.414	ENSCCAG00000028596	SMG7	100	89.589	Cebus_capucinus
ENSGALG00000004667	SMG7	100	89.248	ENSCATG00000011063	SMG7	100	89.423	Cercocebus_atys
ENSGALG00000004667	SMG7	100	88.462	ENSCLAG00000010751	SMG7	100	88.462	Chinchilla_lanigera
ENSGALG00000004667	SMG7	99	82.209	ENSCSAG00000012654	SMG7	97	82.378	Chlorocebus_sabaeus
ENSGALG00000004667	SMG7	92	78.000	ENSCHOG00000010522	SMG7	93	78.364	Choloepus_hoffmanni
ENSGALG00000004667	SMG7	100	93.351	ENSCPBG00000015724	SMG7	100	93.438	Chrysemys_picta_bellii
ENSGALG00000004667	SMG7	99	89.251	ENSCANG00000015680	SMG7	99	89.427	Colobus_angolensis_palliatus
ENSGALG00000004667	SMG7	100	87.675	ENSCGRG00001013705	Smg7	100	87.762	Cricetulus_griseus_chok1gshd
ENSGALG00000004667	SMG7	99	87.743	ENSCGRG00000018401	Smg7	100	87.831	Cricetulus_griseus_crigri
ENSGALG00000004667	SMG7	98	63.356	ENSCVAG00000011842	smg7	100	63.613	Cyprinodon_variegatus
ENSGALG00000004667	SMG7	99	68.021	ENSDARG00000060767	smg7	99	67.389	Danio_rerio
ENSGALG00000004667	SMG7	100	81.407	ENSDORG00000007331	Smg7	100	81.575	Dipodomys_ordii
ENSGALG00000004667	SMG7	97	81.417	ENSETEG00000002654	SMG7	100	81.504	Echinops_telfairi
ENSGALG00000004667	SMG7	100	82.496	ENSEASG00005006524	SMG7	100	82.663	Equus_asinus_asinus
ENSGALG00000004667	SMG7	93	98.187	ENSECAG00000004313	SMG7	97	97.024	Equus_caballus
ENSGALG00000004667	SMG7	97	80.656	ENSEEUG00000002024	SMG7	94	80.484	Erinaceus_europaeus
ENSGALG00000004667	SMG7	99	64.566	ENSELUG00000010293	smg7	93	74.129	Esox_lucius
ENSGALG00000004667	SMG7	99	86.356	ENSFCAG00000010900	SMG7	99	85.701	Felis_catus
ENSGALG00000004667	SMG7	98	88.766	ENSFALG00000003047	SMG7	100	89.021	Ficedula_albicollis
ENSGALG00000004667	SMG7	99	81.535	ENSFDAG00000012121	SMG7	99	81.532	Fukomys_damarensis
ENSGALG00000004667	SMG7	99	64.072	ENSFHEG00000011073	smg7	99	64.010	Fundulus_heteroclitus
ENSGALG00000004667	SMG7	72	74.340	ENSGMOG00000004916	smg7	74	74.340	Gadus_morhua
ENSGALG00000004667	SMG7	99	64.524	ENSGAFG00000019000	smg7	99	62.799	Gambusia_affinis
ENSGALG00000004667	SMG7	97	63.430	ENSGACG00000001634	smg7	99	62.992	Gasterosteus_aculeatus
ENSGALG00000004667	SMG7	100	89.248	ENSGGOG00000002342	SMG7	100	89.423	Gorilla_gorilla
ENSGALG00000004667	SMG7	99	64.323	ENSHBUG00000003726	smg7	93	71.500	Haplochromis_burtoni
ENSGALG00000004667	SMG7	100	88.462	ENSHGLG00000009353	SMG7	100	88.636	Heterocephalus_glaber_female
ENSGALG00000004667	SMG7	100	75.042	ENSHGLG00100004878	-	100	75.209	Heterocephalus_glaber_male
ENSGALG00000004667	SMG7	100	88.462	ENSHGLG00100009637	-	100	88.636	Heterocephalus_glaber_male
ENSGALG00000004667	SMG7	99	69.043	ENSIPUG00000016997	smg7	99	68.609	Ictalurus_punctatus
ENSGALG00000004667	SMG7	100	86.451	ENSSTOG00000000401	SMG7	100	86.451	Ictidomys_tridecemlineatus
ENSGALG00000004667	SMG7	100	81.224	ENSJJAG00000012351	Smg7	100	81.224	Jaculus_jaculus
ENSGALG00000004667	SMG7	97	61.559	ENSKMAG00000004900	smg7	100	61.437	Kryptolebias_marmoratus
ENSGALG00000004667	SMG7	52	61.692	ENSLBEG00000005220	-	75	61.692	Labrus_bergylta
ENSGALG00000004667	SMG7	99	65.236	ENSLBEG00000002983	smg7	99	64.384	Labrus_bergylta
ENSGALG00000004667	SMG7	100	75.215	ENSLACG00000000972	SMG7	100	75.410	Latimeria_chalumnae
ENSGALG00000004667	SMG7	99	82.363	ENSLAFG00000008186	SMG7	99	82.532	Loxodonta_africana
ENSGALG00000004667	SMG7	99	86.004	ENSMFAG00000031653	SMG7	100	85.330	Macaca_fascicularis
ENSGALG00000004667	SMG7	99	88.468	ENSMMUG00000018458	SMG7	99	88.644	Macaca_mulatta
ENSGALG00000004667	SMG7	100	89.248	ENSMNEG00000034798	SMG7	100	89.423	Macaca_nemestrina
ENSGALG00000004667	SMG7	100	89.248	ENSMLEG00000037170	SMG7	100	89.423	Mandrillus_leucophaeus
ENSGALG00000004667	SMG7	88	64.729	ENSMAMG00000018733	smg7	85	63.830	Mastacembelus_armatus
ENSGALG00000004667	SMG7	99	65.614	ENSMZEG00005015247	smg7	93	72.000	Maylandia_zebra
ENSGALG00000004667	SMG7	99	99.381	ENSMGAG00000001561	SMG7	99	99.381	Meleagris_gallopavo
ENSGALG00000004667	SMG7	100	87.850	ENSMAUG00000019484	Smg7	100	88.024	Mesocricetus_auratus
ENSGALG00000004667	SMG7	100	89.685	ENSMICG00000007145	SMG7	100	89.248	Microcebus_murinus
ENSGALG00000004667	SMG7	100	87.675	ENSMOCG00000020748	Smg7	100	87.850	Microtus_ochrogaster
ENSGALG00000004667	SMG7	99	63.966	ENSMMOG00000001524	smg7	99	63.833	Mola_mola
ENSGALG00000004667	SMG7	92	89.323	ENSMODG00000007139	SMG7	99	89.323	Monodelphis_domestica
ENSGALG00000004667	SMG7	99	64.872	ENSMALG00000000061	smg7	93	65.299	Monopterus_albus
ENSGALG00000004667	SMG7	100	87.937	MGP_CAROLIEiJ_G0014704	Smg7	100	87.675	Mus_caroli
ENSGALG00000004667	SMG7	100	87.850	ENSMUSG00000042772	Smg7	100	88.024	Mus_musculus
ENSGALG00000004667	SMG7	100	87.587	MGP_PahariEiJ_G0027940	Smg7	100	87.762	Mus_pahari
ENSGALG00000004667	SMG7	100	87.937	MGP_SPRETEiJ_G0015511	Smg7	100	88.112	Mus_spretus
ENSGALG00000004667	SMG7	98	82.298	ENSMPUG00000011732	SMG7	97	82.383	Mustela_putorius_furo
ENSGALG00000004667	SMG7	100	81.240	ENSMLUG00000015417	SMG7	100	81.407	Myotis_lucifugus
ENSGALG00000004667	SMG7	100	88.636	ENSNGAG00000009836	Smg7	100	88.112	Nannospalax_galili
ENSGALG00000004667	SMG7	98	60.467	ENSNBRG00000024343	smg7	99	60.839	Neolamprologus_brichardi
ENSGALG00000004667	SMG7	100	89.336	ENSNLEG00000018018	SMG7	100	89.510	Nomascus_leucogenys
ENSGALG00000004667	SMG7	69	89.431	ENSMEUG00000004681	SMG7	73	89.431	Notamacropus_eugenii
ENSGALG00000004667	SMG7	96	73.583	ENSOPRG00000013942	SMG7	96	73.147	Ochotona_princeps
ENSGALG00000004667	SMG7	100	88.374	ENSODEG00000010390	SMG7	100	88.462	Octodon_degus
ENSGALG00000004667	SMG7	99	65.358	ENSONIG00000000277	smg7	99	64.505	Oreochromis_niloticus
ENSGALG00000004667	SMG7	98	81.903	ENSOANG00000000994	SMG7	100	81.648	Ornithorhynchus_anatinus
ENSGALG00000004667	SMG7	99	76.624	ENSOCUG00000005887	SMG7	92	76.962	Oryctolagus_cuniculus
ENSGALG00000004667	SMG7	99	62.877	ENSORLG00000007314	smg7	70	92.763	Oryzias_latipes
ENSGALG00000004667	SMG7	99	63.135	ENSORLG00020015779	smg7	70	92.763	Oryzias_latipes_hni
ENSGALG00000004667	SMG7	99	63.480	ENSORLG00015012289	smg7	99	63.072	Oryzias_latipes_hsok
ENSGALG00000004667	SMG7	99	62.185	ENSOMEG00000002328	smg7	99	62.426	Oryzias_melastigma
ENSGALG00000004667	SMG7	97	80.882	ENSOGAG00000003107	SMG7	94	80.623	Otolemur_garnettii
ENSGALG00000004667	SMG7	98	85.169	ENSOARG00000001352	SMG7	100	85.258	Ovis_aries
ENSGALG00000004667	SMG7	100	89.336	ENSPPAG00000031619	SMG7	100	89.510	Pan_paniscus
ENSGALG00000004667	SMG7	100	89.598	ENSPPRG00000011222	SMG7	100	89.510	Panthera_pardus
ENSGALG00000004667	SMG7	96	85.503	ENSPTIG00000007242	SMG7	100	85.417	Panthera_tigris_altaica
ENSGALG00000004667	SMG7	100	89.336	ENSPTRG00000001764	SMG7	100	89.510	Pan_troglodytes
ENSGALG00000004667	SMG7	100	89.248	ENSPANG00000004520	SMG7	100	89.423	Papio_anubis
ENSGALG00000004667	SMG7	99	65.557	ENSPKIG00000007242	smg7	99	65.879	Paramormyrops_kingsleyae
ENSGALG00000004667	SMG7	98	91.548	ENSPSIG00000012201	SMG7	100	91.370	Pelodiscus_sinensis
ENSGALG00000004667	SMG7	71	41.893	ENSPMGG00000021833	smg7	98	42.536	Periophthalmus_magnuspinnatus
ENSGALG00000004667	SMG7	99	85.286	ENSPEMG00000011315	Smg7	99	85.463	Peromyscus_maniculatus_bairdii
ENSGALG00000004667	SMG7	100	89.248	ENSPCIG00000003786	SMG7	100	89.248	Phascolarctos_cinereus
ENSGALG00000004667	SMG7	99	61.450	ENSPFOG00000019219	smg7	91	67.172	Poecilia_formosa
ENSGALG00000004667	SMG7	99	64.065	ENSPLAG00000001446	smg7	99	64.024	Poecilia_latipinna
ENSGALG00000004667	SMG7	96	63.242	ENSPMEG00000005218	smg7	99	63.204	Poecilia_mexicana
ENSGALG00000004667	SMG7	86	64.583	ENSPREG00000019039	smg7	91	61.035	Poecilia_reticulata
ENSGALG00000004667	SMG7	100	89.336	ENSPPYG00000000427	SMG7	100	89.510	Pongo_abelii
ENSGALG00000004667	SMG7	89	85.345	ENSPCAG00000008360	SMG7	88	85.345	Procavia_capensis
ENSGALG00000004667	SMG7	100	86.451	ENSPCOG00000011996	SMG7	100	86.014	Propithecus_coquereli
ENSGALG00000004667	SMG7	91	76.810	ENSPVAG00000000851	SMG7	89	76.994	Pteropus_vampyrus
ENSGALG00000004667	SMG7	99	65.952	ENSPNYG00000007643	smg7	93	71.859	Pundamilia_nyererei
ENSGALG00000004667	SMG7	99	69.291	ENSPNAG00000011374	smg7	99	68.772	Pygocentrus_nattereri
ENSGALG00000004667	SMG7	100	87.511	ENSRNOG00000027962	Smg7	100	87.511	Rattus_norvegicus
ENSGALG00000004667	SMG7	100	89.161	ENSRBIG00000036316	SMG7	100	89.336	Rhinopithecus_bieti
ENSGALG00000004667	SMG7	100	89.161	ENSRROG00000035719	SMG7	100	89.336	Rhinopithecus_roxellana
ENSGALG00000004667	SMG7	100	86.089	ENSSBOG00000023454	SMG7	89	97.561	Saimiri_boliviensis_boliviensis
ENSGALG00000004667	SMG7	99	88.908	ENSSHAG00000013147	SMG7	99	88.840	Sarcophilus_harrisii
ENSGALG00000004667	SMG7	99	69.478	ENSSFOG00015017252	smg7	99	69.679	Scleropages_formosus
ENSGALG00000004667	SMG7	99	64.914	ENSSMAG00000006067	smg7	99	65.749	Scophthalmus_maximus
ENSGALG00000004667	SMG7	63	73.562	ENSSDUG00000017543	smg7	99	64.920	Seriola_dumerili
ENSGALG00000004667	SMG7	99	91.140	ENSSPUG00000002064	SMG7	99	91.140	Sphenodon_punctatus
ENSGALG00000004667	SMG7	99	65.799	ENSSPAG00000008733	smg7	99	64.574	Stegastes_partitus
ENSGALG00000004667	SMG7	100	85.752	ENSSSCG00000015558	SMG7	100	85.927	Sus_scrofa
ENSGALG00000004667	SMG7	99	96.737	ENSTGUG00000003928	SMG7	100	96.737	Taeniopygia_guttata
ENSGALG00000004667	SMG7	97	62.445	ENSTNIG00000002802	smg7	92	62.281	Tetraodon_nigroviridis
ENSGALG00000004667	SMG7	77	86.702	ENSTBEG00000003220	SMG7	71	86.702	Tupaia_belangeri
ENSGALG00000004667	SMG7	96	81.359	ENSTTRG00000014778	SMG7	94	81.098	Tursiops_truncatus
ENSGALG00000004667	SMG7	96	85.481	ENSUAMG00000017473	SMG7	100	85.572	Ursus_americanus
ENSGALG00000004667	SMG7	96	85.481	ENSUMAG00000016389	SMG7	100	85.572	Ursus_maritimus
ENSGALG00000004667	SMG7	100	85.927	ENSVVUG00000008976	SMG7	100	85.490	Vulpes_vulpes
ENSGALG00000004667	SMG7	100	71.478	ENSXETG00000012528	smg7	100	70.700	Xenopus_tropicalis
ENSGALG00000004667	SMG7	99	64.072	ENSXMAG00000007123	smg7	99	63.861	Xiphophorus_maculatus