EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000004947 (Gene tree)
Gene ID: 423727
Gene Symbol: POLR3A
Alias: -
Full Name: Gallus gallus RNA polymerase III subunit A (POLR3A)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 30781 bases
Position: chr6:14006542-14037322
Accession: NM_001006500
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000007915	RNA_pol_Rpb1_5	PF04998.17	2.6e-88	1	1
ENSGALP00000065648	RNA_pol_Rpb1_5	PF04998.17	3e-88	1	1
ENSGALP00000065648	RNA_pol_Rpb1_4	PF05000.17	3.3e-32	1	1
ENSGALP00000007915	RNA_pol_Rpb1_4	PF05000.17	3.5e-32	1	1
ENSGALP00000007915	RNA_pol_Rpb1_2	PF00623.20	8e-75	1	1
ENSGALP00000065648	RNA_pol_Rpb1_2	PF00623.20	8e-75	1	1
ENSGALP00000065648	RNA_pol_Rpb1_3	PF04983.18	5.4e-42	1	1
ENSGALP00000007915	RNA_pol_Rpb1_3	PF04983.18	5.7e-42	1	1
ENSGALP00000007915	RNA_pol_Rpb1_1	PF04997.12	1.7e-96	1	1
ENSGALP00000065648	RNA_pol_Rpb1_1	PF04997.12	2.9e-96	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000090735	-	4209	-	ENSGALP00000065648	1402 (aa)	-	UPI000739DCE1
ENSGALT00000007929	-	4245	-	ENSGALP00000007915	1390 (aa)	-	F1NIK7

Gene Model

Click here to download ENSGALG00000004947's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03020	RNA polymerase	KEGG
gga04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000004947's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000004947	POLR3A	100	96.259	ENSG00000148606	POLR3A	100	96.259	Homo_sapiens
ENSGALG00000004947	POLR3A	62	86.992	ENSAPOG00000022727	polr3a	99	86.992	Acanthochromis_polyacanthus
ENSGALG00000004947	POLR3A	100	95.980	ENSAMEG00000017801	POLR3A	100	95.980	Ailuropoda_melanoleuca
ENSGALG00000004947	POLR3A	93	91.133	ENSACIG00000024504	polr3a	97	91.133	Amphilophus_citrinellus
ENSGALG00000004947	POLR3A	100	90.935	ENSAOCG00000002071	polr3a	100	90.935	Amphiprion_ocellaris
ENSGALG00000004947	POLR3A	100	87.626	ENSAOCG00000003949	-	100	87.626	Amphiprion_ocellaris
ENSGALG00000004947	POLR3A	100	90.935	ENSAPEG00000013351	polr3a	100	90.935	Amphiprion_percula
ENSGALG00000004947	POLR3A	100	90.791	ENSAPEG00000001966	-	100	90.791	Amphiprion_percula
ENSGALG00000004947	POLR3A	100	90.863	ENSATEG00000023277	polr3a	100	90.863	Anabas_testudineus
ENSGALG00000004947	POLR3A	99	99.709	ENSAPLG00000015878	POLR3A	99	99.709	Anas_platyrhynchos
ENSGALG00000004947	POLR3A	93	95.569	ENSACAG00000007985	POLR3A	99	95.569	Anolis_carolinensis
ENSGALG00000004947	POLR3A	100	93.257	ENSANAG00000028922	POLR3A	96	97.452	Aotus_nancymaae
ENSGALG00000004947	POLR3A	100	90.216	ENSACLG00000005914	polr3a	100	90.216	Astatotilapia_calliptera
ENSGALG00000004947	POLR3A	100	88.129	ENSAMXG00000018852	polr3a	100	88.129	Astyanax_mexicanus
ENSGALG00000004947	POLR3A	100	96.259	ENSBTAG00000013259	POLR3A	100	96.259	Bos_taurus
ENSGALG00000004947	POLR3A	99	57.224	WBGene00004411	rpc-1	99	57.224	Caenorhabditis_elegans
ENSGALG00000004947	POLR3A	100	96.115	ENSCJAG00000001015	POLR3A	100	96.115	Callithrix_jacchus
ENSGALG00000004947	POLR3A	100	96.187	ENSCAFG00000015546	POLR3A	100	96.187	Canis_familiaris
ENSGALG00000004947	POLR3A	100	96.187	ENSCAFG00020014711	POLR3A	100	96.187	Canis_lupus_dingo
ENSGALG00000004947	POLR3A	100	95.827	ENSCHIG00000000352	POLR3A	100	95.827	Capra_hircus
ENSGALG00000004947	POLR3A	100	95.827	ENSTSYG00000006671	POLR3A	100	95.827	Carlito_syrichta
ENSGALG00000004947	POLR3A	99	95.636	ENSCAPG00000016031	POLR3A	100	95.636	Cavia_aperea
ENSGALG00000004947	POLR3A	100	95.612	ENSCPOG00000022387	POLR3A	100	95.612	Cavia_porcellus
ENSGALG00000004947	POLR3A	100	93.957	ENSCCAG00000032995	POLR3A	100	93.957	Cebus_capucinus
ENSGALG00000004947	POLR3A	100	96.043	ENSCATG00000035842	POLR3A	100	96.043	Cercocebus_atys
ENSGALG00000004947	POLR3A	100	95.540	ENSCLAG00000009629	POLR3A	100	95.540	Chinchilla_lanigera
ENSGALG00000004947	POLR3A	100	96.187	ENSCSAG00000009292	POLR3A	100	96.187	Chlorocebus_sabaeus
ENSGALG00000004947	POLR3A	81	86.472	ENSCHOG00000008368	POLR3A	95	86.472	Choloepus_hoffmanni
ENSGALG00000004947	POLR3A	99	97.480	ENSCPBG00000002079	POLR3A	99	97.480	Chrysemys_picta_bellii
ENSGALG00000004947	POLR3A	99	69.813	ENSCSAVG00000009925	-	99	69.813	Ciona_savignyi
ENSGALG00000004947	POLR3A	86	94.059	ENSCANG00000041071	POLR3A	98	96.203	Colobus_angolensis_palliatus
ENSGALG00000004947	POLR3A	78	96.663	ENSCGRG00001015599	-	92	96.663	Cricetulus_griseus_chok1gshd
ENSGALG00000004947	POLR3A	88	95.992	ENSCGRG00000001019	Polr3a	100	95.992	Cricetulus_griseus_crigri
ENSGALG00000004947	POLR3A	100	90.647	ENSCSEG00000016653	polr3a	100	90.647	Cynoglossus_semilaevis
ENSGALG00000004947	POLR3A	100	90.144	ENSCVAG00000023049	polr3a	100	90.144	Cyprinodon_variegatus
ENSGALG00000004947	POLR3A	99	90.857	ENSDARG00000102569	polr3a	99	90.857	Danio_rerio
ENSGALG00000004947	POLR3A	100	95.252	ENSDNOG00000010194	POLR3A	100	95.252	Dasypus_novemcinctus
ENSGALG00000004947	POLR3A	100	96.115	ENSDORG00000000184	Polr3a	100	96.115	Dipodomys_ordii
ENSGALG00000004947	POLR3A	99	57.453	FBgn0030687	CG17209	99	57.453	Drosophila_melanogaster
ENSGALG00000004947	POLR3A	88	94.737	ENSETEG00000007477	POLR3A	89	94.737	Echinops_telfairi
ENSGALG00000004947	POLR3A	59	77.049	ENSEBUG00000013761	polr3a	98	77.049	Eptatretus_burgeri
ENSGALG00000004947	POLR3A	100	96.403	ENSEASG00005023053	POLR3A	100	96.403	Equus_asinus_asinus
ENSGALG00000004947	POLR3A	97	96.572	ENSECAG00000019416	POLR3A	100	96.262	Equus_caballus
ENSGALG00000004947	POLR3A	97	90.318	ENSEEUG00000001774	POLR3A	100	91.126	Erinaceus_europaeus
ENSGALG00000004947	POLR3A	100	88.801	ENSELUG00000014016	polr3a	100	88.801	Esox_lucius
ENSGALG00000004947	POLR3A	100	96.475	ENSFCAG00000000843	POLR3A	100	96.475	Felis_catus
ENSGALG00000004947	POLR3A	100	99.001	ENSFALG00000006913	POLR3A	100	99.001	Ficedula_albicollis
ENSGALG00000004947	POLR3A	100	95.540	ENSFDAG00000007813	POLR3A	100	95.540	Fukomys_damarensis
ENSGALG00000004947	POLR3A	95	90.526	ENSFHEG00000011922	polr3a	99	90.526	Fundulus_heteroclitus
ENSGALG00000004947	POLR3A	100	85.442	ENSGMOG00000000291	polr3a	99	85.442	Gadus_morhua
ENSGALG00000004947	POLR3A	100	90.504	ENSGAFG00000005112	polr3a	100	90.504	Gambusia_affinis
ENSGALG00000004947	POLR3A	100	89.784	ENSGACG00000002304	polr3a	100	89.784	Gasterosteus_aculeatus
ENSGALG00000004947	POLR3A	95	97.199	ENSGAGG00000010386	POLR3A	98	97.199	Gopherus_agassizii
ENSGALG00000004947	POLR3A	99	95.087	ENSGGOG00000027729	POLR3A	100	96.511	Gorilla_gorilla
ENSGALG00000004947	POLR3A	100	90.360	ENSHBUG00000018098	polr3a	100	90.360	Haplochromis_burtoni
ENSGALG00000004947	POLR3A	100	95.396	ENSHGLG00000017899	POLR3A	100	95.396	Heterocephalus_glaber_female
ENSGALG00000004947	POLR3A	100	95.396	ENSHGLG00100008483	POLR3A	100	95.396	Heterocephalus_glaber_male
ENSGALG00000004947	POLR3A	100	89.640	ENSHCOG00000001075	polr3a	100	89.640	Hippocampus_comes
ENSGALG00000004947	POLR3A	100	95.899	ENSSTOG00000012983	POLR3A	100	95.899	Ictidomys_tridecemlineatus
ENSGALG00000004947	POLR3A	100	90.216	ENSKMAG00000015290	polr3a	100	90.216	Kryptolebias_marmoratus
ENSGALG00000004947	POLR3A	99	89.129	ENSLBEG00000017214	polr3a	99	89.129	Labrus_bergylta
ENSGALG00000004947	POLR3A	97	90.483	ENSLACG00000018557	POLR3A	99	90.483	Latimeria_chalumnae
ENSGALG00000004947	POLR3A	100	92.606	ENSLOCG00000004942	polr3a	100	92.606	Lepisosteus_oculatus
ENSGALG00000004947	POLR3A	100	94.464	ENSLAFG00000016719	POLR3A	100	94.464	Loxodonta_africana
ENSGALG00000004947	POLR3A	100	96.115	ENSMFAG00000032218	POLR3A	100	96.115	Macaca_fascicularis
ENSGALG00000004947	POLR3A	100	96.115	ENSMMUG00000005514	POLR3A	100	96.115	Macaca_mulatta
ENSGALG00000004947	POLR3A	99	89.350	ENSMNEG00000035163	POLR3A	99	96.263	Macaca_nemestrina
ENSGALG00000004947	POLR3A	100	91.882	ENSMLEG00000030014	POLR3A	98	96.835	Mandrillus_leucophaeus
ENSGALG00000004947	POLR3A	100	90.576	ENSMAMG00000017497	polr3a	100	90.576	Mastacembelus_armatus
ENSGALG00000004947	POLR3A	100	90.216	ENSMZEG00005000576	polr3a	100	90.216	Maylandia_zebra
ENSGALG00000004947	POLR3A	100	81.000	ENSMGAG00000005713	-	100	81.000	Meleagris_gallopavo
ENSGALG00000004947	POLR3A	100	93.813	ENSMAUG00000016247	Polr3a	100	93.813	Mesocricetus_auratus
ENSGALG00000004947	POLR3A	100	96.331	ENSMICG00000005937	POLR3A	100	96.699	Microcebus_murinus
ENSGALG00000004947	POLR3A	100	96.043	ENSMOCG00000012185	Polr3a	100	96.043	Microtus_ochrogaster
ENSGALG00000004947	POLR3A	100	89.568	ENSMMOG00000013822	polr3a	100	89.568	Mola_mola
ENSGALG00000004947	POLR3A	100	96.043	ENSMODG00000001036	POLR3A	100	96.043	Monodelphis_domestica
ENSGALG00000004947	POLR3A	100	90.216	ENSMALG00000001249	polr3a	100	90.216	Monopterus_albus
ENSGALG00000004947	POLR3A	100	95.971	MGP_CAROLIEiJ_G0019016	Polr3a	100	95.971	Mus_caroli
ENSGALG00000004947	POLR3A	100	95.899	ENSMUSG00000025280	Polr3a	100	95.899	Mus_musculus
ENSGALG00000004947	POLR3A	100	95.827	MGP_PahariEiJ_G0030029	Polr3a	100	95.827	Mus_pahari
ENSGALG00000004947	POLR3A	100	93.381	MGP_SPRETEiJ_G0019894	Polr3a	97	98.020	Mus_spretus
ENSGALG00000004947	POLR3A	100	96.362	ENSMPUG00000003790	POLR3A	100	96.362	Mustela_putorius_furo
ENSGALG00000004947	POLR3A	100	94.964	ENSMLUG00000011522	POLR3A	100	94.964	Myotis_lucifugus
ENSGALG00000004947	POLR3A	100	93.885	ENSNGAG00000015863	Polr3a	100	93.885	Nannospalax_galili
ENSGALG00000004947	POLR3A	100	88.777	ENSNBRG00000014262	polr3a	100	88.777	Neolamprologus_brichardi
ENSGALG00000004947	POLR3A	88	89.610	ENSNLEG00000010501	POLR3A	92	89.610	Nomascus_leucogenys
ENSGALG00000004947	POLR3A	99	83.345	ENSMEUG00000012446	POLR3A	100	83.345	Notamacropus_eugenii
ENSGALG00000004947	POLR3A	100	90.935	ENSOPRG00000001880	-	100	90.935	Ochotona_princeps
ENSGALG00000004947	POLR3A	100	94.460	ENSODEG00000015146	POLR3A	100	94.460	Octodon_degus
ENSGALG00000004947	POLR3A	100	90.647	ENSONIG00000016129	polr3a	100	90.647	Oreochromis_niloticus
ENSGALG00000004947	POLR3A	99	95.221	ENSOANG00000007013	POLR3A	100	96.056	Ornithorhynchus_anatinus
ENSGALG00000004947	POLR3A	100	95.755	ENSOCUG00000012450	POLR3A	100	95.755	Oryctolagus_cuniculus
ENSGALG00000004947	POLR3A	100	90.576	ENSORLG00000008958	polr3a	100	90.576	Oryzias_latipes
ENSGALG00000004947	POLR3A	100	88.273	ENSORLG00020007525	polr3a	98	90.909	Oryzias_latipes_hni
ENSGALG00000004947	POLR3A	100	90.432	ENSORLG00015006633	polr3a	100	90.432	Oryzias_latipes_hsok
ENSGALG00000004947	POLR3A	100	89.784	ENSOMEG00000012865	polr3a	100	89.784	Oryzias_melastigma
ENSGALG00000004947	POLR3A	100	95.827	ENSOGAG00000010995	POLR3A	100	95.827	Otolemur_garnettii
ENSGALG00000004947	POLR3A	100	95.905	ENSOARG00000009656	POLR3A	100	95.905	Ovis_aries
ENSGALG00000004947	POLR3A	100	96.475	ENSPPRG00000002128	POLR3A	100	96.475	Panthera_pardus
ENSGALG00000004947	POLR3A	100	96.475	ENSPTIG00000020916	POLR3A	100	96.475	Panthera_tigris_altaica
ENSGALG00000004947	POLR3A	100	96.187	ENSPTRG00000002664	POLR3A	100	96.187	Pan_troglodytes
ENSGALG00000004947	POLR3A	100	96.043	ENSPANG00000022508	POLR3A	100	96.043	Papio_anubis
ENSGALG00000004947	POLR3A	100	92.302	ENSPKIG00000008140	polr3a	100	92.302	Paramormyrops_kingsleyae
ENSGALG00000004947	POLR3A	99	96.307	ENSPSIG00000002092	POLR3A	100	97.151	Pelodiscus_sinensis
ENSGALG00000004947	POLR3A	100	95.827	ENSPEMG00000006768	Polr3a	100	95.827	Peromyscus_maniculatus_bairdii
ENSGALG00000004947	POLR3A	100	95.899	ENSPCIG00000015842	POLR3A	100	95.899	Phascolarctos_cinereus
ENSGALG00000004947	POLR3A	54	92.215	ENSPFOG00000006458	polr3a	100	92.215	Poecilia_formosa
ENSGALG00000004947	POLR3A	100	90.791	ENSPLAG00000000997	polr3a	100	90.791	Poecilia_latipinna
ENSGALG00000004947	POLR3A	100	90.719	ENSPMEG00000006821	polr3a	100	90.719	Poecilia_mexicana
ENSGALG00000004947	POLR3A	100	90.504	ENSPREG00000002385	polr3a	100	90.504	Poecilia_reticulata
ENSGALG00000004947	POLR3A	93	96.127	ENSPPYG00000002305	POLR3A	99	96.127	Pongo_abelii
ENSGALG00000004947	POLR3A	85	83.397	ENSPCAG00000005690	POLR3A	87	83.397	Procavia_capensis
ENSGALG00000004947	POLR3A	100	96.115	ENSPCOG00000028311	POLR3A	100	96.115	Propithecus_coquereli
ENSGALG00000004947	POLR3A	100	94.820	ENSPVAG00000015553	POLR3A	100	94.820	Pteropus_vampyrus
ENSGALG00000004947	POLR3A	100	90.216	ENSPNYG00000020987	polr3a	100	90.216	Pundamilia_nyererei
ENSGALG00000004947	POLR3A	99	86.897	ENSPNAG00000006629	polr3a	99	86.897	Pygocentrus_nattereri
ENSGALG00000004947	POLR3A	100	95.827	ENSRNOG00000010008	Polr3a	100	95.827	Rattus_norvegicus
ENSGALG00000004947	POLR3A	100	92.014	ENSRBIG00000034967	POLR3A	98	96.835	Rhinopithecus_bieti
ENSGALG00000004947	POLR3A	100	96.115	ENSRROG00000025527	POLR3A	100	96.115	Rhinopithecus_roxellana
ENSGALG00000004947	POLR3A	98	50.519	YOR116C	RPO31	99	50.519	Saccharomyces_cerevisiae
ENSGALG00000004947	POLR3A	100	96.187	ENSSBOG00000022199	POLR3A	100	96.187	Saimiri_boliviensis_boliviensis
ENSGALG00000004947	POLR3A	100	95.827	ENSSHAG00000007588	POLR3A	94	95.827	Sarcophilus_harrisii
ENSGALG00000004947	POLR3A	100	92.734	ENSSFOG00015014357	polr3a	100	92.734	Scleropages_formosus
ENSGALG00000004947	POLR3A	100	90.144	ENSSMAG00000001780	polr3a	100	90.144	Scophthalmus_maximus
ENSGALG00000004947	POLR3A	100	90.863	ENSSDUG00000019840	polr3a	100	90.863	Seriola_dumerili
ENSGALG00000004947	POLR3A	100	90.863	ENSSLDG00000023908	polr3a	100	90.863	Seriola_lalandi_dorsalis
ENSGALG00000004947	POLR3A	69	95.611	ENSSARG00000009916	POLR3A	89	95.611	Sorex_araneus
ENSGALG00000004947	POLR3A	100	95.468	ENSSPUG00000013209	POLR3A	100	95.468	Sphenodon_punctatus
ENSGALG00000004947	POLR3A	100	90.791	ENSSPAG00000017712	polr3a	100	90.791	Stegastes_partitus
ENSGALG00000004947	POLR3A	100	96.148	ENSSSCG00000010327	POLR3A	100	96.148	Sus_scrofa
ENSGALG00000004947	POLR3A	100	98.921	ENSTGUG00000006423	-	100	98.921	Taeniopygia_guttata
ENSGALG00000004947	POLR3A	100	89.928	ENSTRUG00000013488	polr3a	100	89.928	Takifugu_rubripes
ENSGALG00000004947	POLR3A	100	90.014	ENSTNIG00000013151	polr3a	100	90.014	Tetraodon_nigroviridis
ENSGALG00000004947	POLR3A	71	94.681	ENSTBEG00000015288	POLR3A	75	94.681	Tupaia_belangeri
ENSGALG00000004947	POLR3A	96	95.665	ENSTTRG00000007817	POLR3A	100	95.665	Tursiops_truncatus
ENSGALG00000004947	POLR3A	100	93.885	ENSUAMG00000011283	POLR3A	100	93.885	Ursus_americanus
ENSGALG00000004947	POLR3A	100	96.259	ENSUMAG00000013913	POLR3A	100	96.259	Ursus_maritimus
ENSGALG00000004947	POLR3A	99	87.855	ENSVPAG00000003285	POLR3A	100	87.855	Vicugna_pacos
ENSGALG00000004947	POLR3A	100	96.115	ENSVVUG00000025523	POLR3A	100	96.115	Vulpes_vulpes
ENSGALG00000004947	POLR3A	86	92.982	ENSXETG00000018101	polr3a	100	92.982	Xenopus_tropicalis
ENSGALG00000004947	POLR3A	100	90.504	ENSXMAG00000015213	polr3a	100	90.504	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001056	RNA polymerase III activity	21873635.	IBA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	21873635.	IBA	Function
GO:0005666	RNA polymerase III complex	21873635.	IBA	Component
GO:0006383	transcription by RNA polymerase III	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function