EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000005277 (Gene tree)
Gene ID: 424468
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 8438 bases
Position: chr8:12295535-12303972
Accession: 424468
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000008450	RTC	PF01137.21	4.8e-85	1	1
ENSGALP00000008450	RTC_insert	PF05189.13	2.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000008464	RTCA-201	1930	-	ENSGALP00000008450	365 (aa)	XP_422311	E1C1Y0

Gene Model

Click here to download ENSGALG00000005277's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000005277's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000005277	RTCA	100	83.333	ENSG00000137996	RTCA	100	85.714	Homo_sapiens
ENSGALG00000005277	RTCA	100	67.945	ENSAPOG00000001345	rtca	99	67.945	Acanthochromis_polyacanthus
ENSGALG00000005277	RTCA	73	82.528	ENSAMEG00000008855	RTCA	100	82.528	Ailuropoda_melanoleuca
ENSGALG00000005277	RTCA	100	67.397	ENSACIG00000019643	rtca	100	67.397	Amphilophus_citrinellus
ENSGALG00000005277	RTCA	100	67.945	ENSAOCG00000014979	rtca	99	67.945	Amphiprion_ocellaris
ENSGALG00000005277	RTCA	100	67.945	ENSAPEG00000006945	rtca	99	67.945	Amphiprion_percula
ENSGALG00000005277	RTCA	100	66.301	ENSATEG00000006315	rtca	100	66.301	Anabas_testudineus
ENSGALG00000005277	RTCA	96	93.201	ENSAPLG00000015430	RTCA	100	93.201	Anas_platyrhynchos
ENSGALG00000005277	RTCA	100	81.967	ENSANAG00000025446	RTCA	100	81.967	Aotus_nancymaae
ENSGALG00000005277	RTCA	100	67.397	ENSACLG00000020770	rtca	99	67.397	Astatotilapia_calliptera
ENSGALG00000005277	RTCA	98	69.638	ENSAMXG00000043271	rtca	98	69.638	Astyanax_mexicanus
ENSGALG00000005277	RTCA	100	84.153	ENSBTAG00000006321	RTCA	100	84.153	Bos_taurus
ENSGALG00000005277	RTCA	100	82.787	ENSCJAG00000003398	RTCA	100	82.787	Callithrix_jacchus
ENSGALG00000005277	RTCA	100	82.787	ENSCAFG00000020010	RTCA	68	82.787	Canis_familiaris
ENSGALG00000005277	RTCA	100	82.787	ENSCAFG00020011528	RTCA	57	82.787	Canis_lupus_dingo
ENSGALG00000005277	RTCA	100	83.880	ENSCHIG00000018937	RTCA	100	83.880	Capra_hircus
ENSGALG00000005277	RTCA	100	81.694	ENSTSYG00000011305	RTCA	100	81.694	Carlito_syrichta
ENSGALG00000005277	RTCA	100	82.240	ENSCCAG00000021844	RTCA	100	82.240	Cebus_capucinus
ENSGALG00000005277	RTCA	100	80.211	ENSCATG00000019364	RTCA	100	82.201	Cercocebus_atys
ENSGALG00000005277	RTCA	87	81.646	ENSCLAG00000006125	RTCA	100	81.646	Chinchilla_lanigera
ENSGALG00000005277	RTCA	100	83.333	ENSCSAG00000001509	RTCA	100	83.333	Chlorocebus_sabaeus
ENSGALG00000005277	RTCA	100	83.333	ENSCHOG00000005211	RTCA	100	83.333	Choloepus_hoffmanni
ENSGALG00000005277	RTCA	100	90.137	ENSCPBG00000026658	RTCA	100	90.137	Chrysemys_picta_bellii
ENSGALG00000005277	RTCA	99	52.747	ENSCING00000007875	-	99	52.747	Ciona_intestinalis
ENSGALG00000005277	RTCA	99	52.473	ENSCSAVG00000007269	-	99	52.473	Ciona_savignyi
ENSGALG00000005277	RTCA	100	83.060	ENSCANG00000040106	RTCA	100	83.060	Colobus_angolensis_palliatus
ENSGALG00000005277	RTCA	73	81.413	ENSCGRG00001013163	Rtca	85	81.413	Cricetulus_griseus_chok1gshd
ENSGALG00000005277	RTCA	98	65.738	ENSCSEG00000000530	rtca	96	65.738	Cynoglossus_semilaevis
ENSGALG00000005277	RTCA	100	55.707	ENSCVAG00000021809	rtca	100	55.707	Cyprinodon_variegatus
ENSGALG00000005277	RTCA	100	69.041	ENSDARG00000002215	rtca	100	69.041	Danio_rerio
ENSGALG00000005277	RTCA	100	82.240	ENSDNOG00000000456	RTCA	100	82.240	Dasypus_novemcinctus
ENSGALG00000005277	RTCA	100	82.787	ENSDORG00000005448	Rtca	100	82.787	Dipodomys_ordii
ENSGALG00000005277	RTCA	99	38.017	FBgn0025630	Rtca	99	38.017	Drosophila_melanogaster
ENSGALG00000005277	RTCA	93	55.556	ENSEBUG00000008556	rtca	94	55.556	Eptatretus_burgeri
ENSGALG00000005277	RTCA	100	83.333	ENSEASG00005015926	RTCA	100	83.333	Equus_asinus_asinus
ENSGALG00000005277	RTCA	100	83.333	ENSECAG00000019831	RTCA	100	83.333	Equus_caballus
ENSGALG00000005277	RTCA	91	73.410	ENSEEUG00000001165	RTCA	100	73.410	Erinaceus_europaeus
ENSGALG00000005277	RTCA	99	66.667	ENSELUG00000003741	rtca	99	66.667	Esox_lucius
ENSGALG00000005277	RTCA	100	83.060	ENSFCAG00000024460	RTCA	100	83.060	Felis_catus
ENSGALG00000005277	RTCA	91	93.093	ENSFALG00000002443	RTCA	90	93.093	Ficedula_albicollis
ENSGALG00000005277	RTCA	100	82.240	ENSFDAG00000012070	-	100	82.240	Fukomys_damarensis
ENSGALG00000005277	RTCA	98	65.746	ENSFDAG00000016084	-	100	65.746	Fukomys_damarensis
ENSGALG00000005277	RTCA	55	67.662	ENSFHEG00000002868	rtca	92	64.516	Fundulus_heteroclitus
ENSGALG00000005277	RTCA	100	64.658	ENSGMOG00000013264	rtca	100	64.658	Gadus_morhua
ENSGALG00000005277	RTCA	100	68.219	ENSGAFG00000011853	rtca	99	68.219	Gambusia_affinis
ENSGALG00000005277	RTCA	100	67.123	ENSGACG00000013497	rtca	100	67.123	Gasterosteus_aculeatus
ENSGALG00000005277	RTCA	80	90.102	ENSGAGG00000023306	RTCA	100	90.102	Gopherus_agassizii
ENSGALG00000005277	RTCA	100	83.060	ENSGGOG00000009546	-	100	83.060	Gorilla_gorilla
ENSGALG00000005277	RTCA	100	82.240	ENSGGOG00000044018	-	100	82.240	Gorilla_gorilla
ENSGALG00000005277	RTCA	100	67.397	ENSHBUG00000002114	rtca	99	67.397	Haplochromis_burtoni
ENSGALG00000005277	RTCA	100	81.421	ENSHGLG00000002617	RTCA	100	81.421	Heterocephalus_glaber_female
ENSGALG00000005277	RTCA	100	81.421	ENSHGLG00100006056	RTCA	100	81.421	Heterocephalus_glaber_male
ENSGALG00000005277	RTCA	100	61.918	ENSHCOG00000020628	rtca	89	61.918	Hippocampus_comes
ENSGALG00000005277	RTCA	100	69.041	ENSIPUG00000024803	rtca	100	69.041	Ictalurus_punctatus
ENSGALG00000005277	RTCA	100	76.776	ENSSTOG00000013528	-	100	76.776	Ictidomys_tridecemlineatus
ENSGALG00000005277	RTCA	100	72.678	ENSSTOG00000033099	-	100	72.678	Ictidomys_tridecemlineatus
ENSGALG00000005277	RTCA	100	60.656	ENSJJAG00000016178	Rtca	100	60.656	Jaculus_jaculus
ENSGALG00000005277	RTCA	100	68.493	ENSKMAG00000006651	rtca	99	68.493	Kryptolebias_marmoratus
ENSGALG00000005277	RTCA	88	66.250	ENSLBEG00000002448	-	99	66.250	Labrus_bergylta
ENSGALG00000005277	RTCA	99	66.667	ENSLBEG00000028971	rtca	99	66.667	Labrus_bergylta
ENSGALG00000005277	RTCA	100	74.521	ENSLACG00000013666	RTCA	100	74.521	Latimeria_chalumnae
ENSGALG00000005277	RTCA	100	68.493	ENSLOCG00000000093	rtca	99	68.493	Lepisosteus_oculatus
ENSGALG00000005277	RTCA	100	82.514	ENSLAFG00000001473	RTCA	100	82.514	Loxodonta_africana
ENSGALG00000005277	RTCA	100	83.333	ENSMFAG00000034132	RTCA	100	83.333	Macaca_fascicularis
ENSGALG00000005277	RTCA	100	82.787	ENSMMUG00000019105	RTCA	100	82.787	Macaca_mulatta
ENSGALG00000005277	RTCA	84	82.524	ENSMNEG00000037163	RTCA	100	82.524	Macaca_nemestrina
ENSGALG00000005277	RTCA	100	68.033	ENSMLEG00000042151	RTCA	100	68.033	Mandrillus_leucophaeus
ENSGALG00000005277	RTCA	100	69.589	ENSMAMG00000016536	rtca	100	69.589	Mastacembelus_armatus
ENSGALG00000005277	RTCA	100	67.397	ENSMZEG00005017945	rtca	99	67.397	Maylandia_zebra
ENSGALG00000005277	RTCA	87	97.799	ENSMGAG00000006892	RTCA	99	97.799	Meleagris_gallopavo
ENSGALG00000005277	RTCA	100	81.967	ENSMAUG00000008488	Rtca	100	81.967	Mesocricetus_auratus
ENSGALG00000005277	RTCA	84	82.201	ENSMICG00000008643	RTCA	100	82.201	Microcebus_murinus
ENSGALG00000005277	RTCA	100	82.514	ENSMOCG00000016660	Rtca	100	82.514	Microtus_ochrogaster
ENSGALG00000005277	RTCA	84	68.506	ENSMMOG00000007750	rtca	100	68.506	Mola_mola
ENSGALG00000005277	RTCA	100	81.148	ENSMODG00000003557	RTCA	100	81.148	Monodelphis_domestica
ENSGALG00000005277	RTCA	100	69.315	ENSMALG00000020844	rtca	100	69.315	Monopterus_albus
ENSGALG00000005277	RTCA	100	82.514	MGP_CAROLIEiJ_G0025565	Rtca	100	83.099	Mus_caroli
ENSGALG00000005277	RTCA	100	81.967	ENSMUSG00000000339	Rtca	100	83.099	Mus_musculus
ENSGALG00000005277	RTCA	100	82.240	MGP_PahariEiJ_G0027011	Rtca	100	82.394	Mus_pahari
ENSGALG00000005277	RTCA	100	82.240	MGP_SPRETEiJ_G0026515	Rtca	100	82.394	Mus_spretus
ENSGALG00000005277	RTCA	100	83.060	ENSMPUG00000012119	RTCA	100	83.060	Mustela_putorius_furo
ENSGALG00000005277	RTCA	100	78.474	ENSMLUG00000009922	RTCA	100	78.474	Myotis_lucifugus
ENSGALG00000005277	RTCA	100	81.694	ENSNGAG00000011540	Rtca	99	81.694	Nannospalax_galili
ENSGALG00000005277	RTCA	100	67.397	ENSNBRG00000003062	rtca	99	67.397	Neolamprologus_brichardi
ENSGALG00000005277	RTCA	100	83.060	ENSNLEG00000031426	RTCA	100	83.060	Nomascus_leucogenys
ENSGALG00000005277	RTCA	58	80.488	ENSMEUG00000010030	-	77	72.727	Notamacropus_eugenii
ENSGALG00000005277	RTCA	73	77.695	ENSOPRG00000012092	RTCA	71	77.695	Ochotona_princeps
ENSGALG00000005277	RTCA	95	82.184	ENSODEG00000006990	RTCA	96	82.336	Octodon_degus
ENSGALG00000005277	RTCA	100	67.397	ENSONIG00000007753	rtca	99	67.397	Oreochromis_niloticus
ENSGALG00000005277	RTCA	87	81.073	ENSOANG00000012055	RTCA	98	81.073	Ornithorhynchus_anatinus
ENSGALG00000005277	RTCA	100	83.333	ENSOCUG00000014247	RTCA	100	83.333	Oryctolagus_cuniculus
ENSGALG00000005277	RTCA	100	67.671	ENSORLG00000013605	rtca	100	67.671	Oryzias_latipes
ENSGALG00000005277	RTCA	100	67.671	ENSORLG00020001904	rtca	100	67.671	Oryzias_latipes_hni
ENSGALG00000005277	RTCA	100	67.397	ENSORLG00015021064	rtca	100	67.397	Oryzias_latipes_hsok
ENSGALG00000005277	RTCA	100	68.493	ENSOMEG00000000756	rtca	100	68.493	Oryzias_melastigma
ENSGALG00000005277	RTCA	100	74.590	ENSOGAG00000005627	RTCA	100	74.590	Otolemur_garnettii
ENSGALG00000005277	RTCA	87	82.704	ENSOARG00000018122	RTCA	100	82.704	Ovis_aries
ENSGALG00000005277	RTCA	100	80.211	ENSPPAG00000035119	RTCA	100	82.201	Pan_paniscus
ENSGALG00000005277	RTCA	100	83.060	ENSPPRG00000000350	RTCA	100	83.060	Panthera_pardus
ENSGALG00000005277	RTCA	100	82.787	ENSPTIG00000012816	RTCA	100	82.787	Panthera_tigris_altaica
ENSGALG00000005277	RTCA	100	79.683	ENSPTRG00000001004	RTCA	100	81.553	Pan_troglodytes
ENSGALG00000005277	RTCA	100	83.607	ENSPANG00000000346	RTCA	100	83.607	Papio_anubis
ENSGALG00000005277	RTCA	100	70.411	ENSPKIG00000001653	rtca	100	70.411	Paramormyrops_kingsleyae
ENSGALG00000005277	RTCA	100	89.589	ENSPSIG00000011408	RTCA	100	89.589	Pelodiscus_sinensis
ENSGALG00000005277	RTCA	100	82.514	ENSPEMG00000018582	Rtca	100	82.514	Peromyscus_maniculatus_bairdii
ENSGALG00000005277	RTCA	99	55.679	ENSPMAG00000009110	rtca	99	55.220	Petromyzon_marinus
ENSGALG00000005277	RTCA	100	82.514	ENSPCIG00000007684	RTCA	100	82.514	Phascolarctos_cinereus
ENSGALG00000005277	RTCA	100	68.306	ENSPFOG00000004824	rtca	100	68.306	Poecilia_formosa
ENSGALG00000005277	RTCA	100	68.493	ENSPLAG00000011753	rtca	99	68.493	Poecilia_latipinna
ENSGALG00000005277	RTCA	100	68.493	ENSPMEG00000020469	rtca	99	68.493	Poecilia_mexicana
ENSGALG00000005277	RTCA	100	69.315	ENSPREG00000001365	rtca	99	69.315	Poecilia_reticulata
ENSGALG00000005277	RTCA	100	82.787	ENSPPYG00000001115	RTCA	100	82.787	Pongo_abelii
ENSGALG00000005277	RTCA	99	80.332	ENSPCAG00000005076	RTCA	99	80.332	Procavia_capensis
ENSGALG00000005277	RTCA	100	83.333	ENSPCOG00000005603	RTCA	100	83.333	Propithecus_coquereli
ENSGALG00000005277	RTCA	100	79.156	ENSPVAG00000009478	RTCA	100	79.156	Pteropus_vampyrus
ENSGALG00000005277	RTCA	100	67.397	ENSPNYG00000004722	rtca	99	67.397	Pundamilia_nyererei
ENSGALG00000005277	RTCA	100	69.041	ENSPNAG00000022270	rtca	100	69.041	Pygocentrus_nattereri
ENSGALG00000005277	RTCA	100	82.787	ENSRNOG00000014575	Rtca	100	82.787	Rattus_norvegicus
ENSGALG00000005277	RTCA	100	79.947	ENSRBIG00000041180	RTCA	100	81.877	Rhinopithecus_bieti
ENSGALG00000005277	RTCA	100	82.787	ENSRROG00000024929	RTCA	100	82.787	Rhinopithecus_roxellana
ENSGALG00000005277	RTCA	100	82.240	ENSSBOG00000028626	RTCA	100	82.240	Saimiri_boliviensis_boliviensis
ENSGALG00000005277	RTCA	100	82.240	ENSSHAG00000001758	RTCA	100	82.240	Sarcophilus_harrisii
ENSGALG00000005277	RTCA	98	66.017	ENSSMAG00000014680	rtca	97	66.017	Scophthalmus_maximus
ENSGALG00000005277	RTCA	98	67.967	ENSSDUG00000015585	rtca	97	67.967	Seriola_dumerili
ENSGALG00000005277	RTCA	96	68.286	ENSSLDG00000018985	rtca	95	68.286	Seriola_lalandi_dorsalis
ENSGALG00000005277	RTCA	87	78.549	ENSSARG00000013993	RTCA	100	78.549	Sorex_araneus
ENSGALG00000005277	RTCA	100	67.671	ENSSPAG00000011938	rtca	99	67.671	Stegastes_partitus
ENSGALG00000005277	RTCA	100	84.699	ENSSSCG00000006865	RTCA	100	84.699	Sus_scrofa
ENSGALG00000005277	RTCA	100	93.151	ENSTGUG00000005154	RTCA	100	93.151	Taeniopygia_guttata
ENSGALG00000005277	RTCA	100	68.493	ENSTRUG00000008799	rtca	100	68.493	Takifugu_rubripes
ENSGALG00000005277	RTCA	100	68.219	ENSTNIG00000004725	rtca	100	68.219	Tetraodon_nigroviridis
ENSGALG00000005277	RTCA	59	72.727	ENSTBEG00000000943	RTCA	82	53.782	Tupaia_belangeri
ENSGALG00000005277	RTCA	100	79.156	ENSTTRG00000015327	RTCA	100	79.156	Tursiops_truncatus
ENSGALG00000005277	RTCA	93	81.232	ENSUAMG00000017265	RTCA	96	81.232	Ursus_americanus
ENSGALG00000005277	RTCA	100	82.240	ENSUMAG00000007881	RTCA	100	82.240	Ursus_maritimus
ENSGALG00000005277	RTCA	87	75.079	ENSVPAG00000001039	RTCA	84	75.079	Vicugna_pacos
ENSGALG00000005277	RTCA	100	82.514	ENSVVUG00000022041	RTCA	68	82.514	Vulpes_vulpes
ENSGALG00000005277	RTCA	99	63.215	ENSXETG00000031661	RTCA	99	63.215	Xenopus_tropicalis
ENSGALG00000005277	RTCA	100	60.822	ENSXCOG00000008002	rtca	100	60.822	Xiphophorus_couchianus
ENSGALG00000005277	RTCA	100	68.219	ENSXMAG00000005482	rtca	99	68.219	Xiphophorus_maculatus