EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000005290 (Gene tree)
Gene ID: 424470
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 7862 bases
Position: chr8:12328300-12336161
Accession: 424470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000008467	TRM13	PF05206.14	5.1e-89	1	1
ENSGALP00000069428	TRM13	PF05206.14	5.4e-89	1	1
ENSGALP00000008467	zf-U11-48K	PF05253.12	1.5e-09	1	1
ENSGALP00000069428	zf-U11-48K	PF05253.12	1.5e-09	1	1
ENSGALP00000008467	zf-TRM13_CCCH	PF11722.8	1.8e-11	1	1
ENSGALP00000069428	zf-TRM13_CCCH	PF11722.8	1.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000008481	TRMT13-202	1957	-	ENSGALP00000008467	472 (aa)	-	F1P1W7
ENSGALT00000092716	TRMT13-201	1482	-	ENSGALP00000069428	481 (aa)	XP_422313	UPI0003505B69

Gene Model

Click here to download ENSGALG00000005290's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000005290's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000005290	TRMT13	98	64.968	ENSG00000122435	TRMT13	95	65.714	Homo_sapiens
ENSGALG00000005290	TRMT13	96	49.293	ENSAPOG00000015131	trmt13	98	49.592	Acanthochromis_polyacanthus
ENSGALG00000005290	TRMT13	96	66.231	ENSAMEG00000008917	TRMT13	95	66.374	Ailuropoda_melanoleuca
ENSGALG00000005290	TRMT13	96	53.433	ENSACIG00000005804	trmt13	96	51.073	Amphilophus_citrinellus
ENSGALG00000005290	TRMT13	96	50.000	ENSAOCG00000023585	trmt13	98	49.796	Amphiprion_ocellaris
ENSGALG00000005290	TRMT13	96	50.405	ENSAPEG00000004025	trmt13	98	50.204	Amphiprion_percula
ENSGALG00000005290	TRMT13	96	53.731	ENSATEG00000006597	trmt13	95	52.826	Anabas_testudineus
ENSGALG00000005290	TRMT13	89	84.977	ENSAPLG00000014924	TRMT13	99	84.235	Anas_platyrhynchos
ENSGALG00000005290	TRMT13	99	66.030	ENSACAG00000003498	TRMT13	96	66.962	Anolis_carolinensis
ENSGALG00000005290	TRMT13	98	65.180	ENSANAG00000019525	TRMT13	95	66.154	Aotus_nancymaae
ENSGALG00000005290	TRMT13	96	55.531	ENSACLG00000020018	trmt13	98	55.435	Astatotilapia_calliptera
ENSGALG00000005290	TRMT13	96	55.699	ENSAMXG00000017963	trmt13	97	55.172	Astyanax_mexicanus
ENSGALG00000005290	TRMT13	96	66.231	ENSBTAG00000015781	TRMT13	95	66.374	Bos_taurus
ENSGALG00000005290	TRMT13	98	63.907	ENSCJAG00000000200	TRMT13	90	76.692	Callithrix_jacchus
ENSGALG00000005290	TRMT13	64	66.013	ENSCAFG00000020021	TRMT13	97	66.013	Canis_familiaris
ENSGALG00000005290	TRMT13	55	72.587	ENSCAFG00020011572	TRMT13	89	72.374	Canis_lupus_dingo
ENSGALG00000005290	TRMT13	98	66.030	ENSCHIG00000015395	TRMT13	95	67.033	Capra_hircus
ENSGALG00000005290	TRMT13	96	63.124	ENSTSYG00000010811	TRMT13	96	64.748	Carlito_syrichta
ENSGALG00000005290	TRMT13	75	51.507	ENSCAPG00000009085	TRMT13	99	52.055	Cavia_aperea
ENSGALG00000005290	TRMT13	96	65.944	ENSCPOG00000000694	TRMT13	96	65.032	Cavia_porcellus
ENSGALG00000005290	TRMT13	98	64.968	ENSCCAG00000023772	TRMT13	95	65.934	Cebus_capucinus
ENSGALG00000005290	TRMT13	98	64.968	ENSCATG00000033556	TRMT13	95	65.714	Cercocebus_atys
ENSGALG00000005290	TRMT13	87	64.493	ENSCLAG00000008220	TRMT13	99	64.115	Chinchilla_lanigera
ENSGALG00000005290	TRMT13	98	64.968	ENSCSAG00000001506	TRMT13	95	65.714	Chlorocebus_sabaeus
ENSGALG00000005290	TRMT13	99	76.160	ENSCPBG00000026671	TRMT13	96	77.293	Chrysemys_picta_bellii
ENSGALG00000005290	TRMT13	98	65.180	ENSCANG00000034659	TRMT13	95	65.934	Colobus_angolensis_palliatus
ENSGALG00000005290	TRMT13	98	65.032	ENSCGRG00001021601	Trmt13	94	66.079	Cricetulus_griseus_chok1gshd
ENSGALG00000005290	TRMT13	51	61.694	ENSCGRG00000000093	-	96	61.694	Cricetulus_griseus_crigri
ENSGALG00000005290	TRMT13	98	51.293	ENSCSEG00000000591	trmt13	96	51.454	Cynoglossus_semilaevis
ENSGALG00000005290	TRMT13	96	53.586	ENSCVAG00000017342	trmt13	92	53.404	Cyprinodon_variegatus
ENSGALG00000005290	TRMT13	97	58.584	ENSDARG00000102846	trmt13	95	58.590	Danio_rerio
ENSGALG00000005290	TRMT13	55	70.342	ENSDNOG00000001710	TRMT13	79	71.042	Dasypus_novemcinctus
ENSGALG00000005290	TRMT13	98	64.043	ENSDORG00000015808	Trmt13	96	64.208	Dipodomys_ordii
ENSGALG00000005290	TRMT13	96	34.810	FBgn0037435	CG18048	94	34.395	Drosophila_melanogaster
ENSGALG00000005290	TRMT13	96	55.724	ENSETEG00000005819	TRMT13	96	55.628	Echinops_telfairi
ENSGALG00000005290	TRMT13	95	48.148	ENSEBUG00000014444	trmt13	96	47.484	Eptatretus_burgeri
ENSGALG00000005290	TRMT13	98	65.966	ENSEASG00005015918	TRMT13	96	65.890	Equus_asinus_asinus
ENSGALG00000005290	TRMT13	98	65.966	ENSECAG00000022626	TRMT13	96	65.890	Equus_caballus
ENSGALG00000005290	TRMT13	77	65.455	ENSEEUG00000000294	TRMT13	72	65.455	Erinaceus_europaeus
ENSGALG00000005290	TRMT13	96	54.526	ENSELUG00000003803	trmt13	97	54.741	Esox_lucius
ENSGALG00000005290	TRMT13	98	65.745	ENSFCAG00000030618	TRMT13	95	67.253	Felis_catus
ENSGALG00000005290	TRMT13	97	80.000	ENSFALG00000002424	TRMT13	96	79.956	Ficedula_albicollis
ENSGALG00000005290	TRMT13	98	65.745	ENSFDAG00000006342	TRMT13	96	65.733	Fukomys_damarensis
ENSGALG00000005290	TRMT13	78	56.959	ENSFHEG00000022954	trmt13	98	54.054	Fundulus_heteroclitus
ENSGALG00000005290	TRMT13	95	49.889	ENSGMOG00000013223	trmt13	99	49.336	Gadus_morhua
ENSGALG00000005290	TRMT13	76	55.676	ENSGAFG00000001577	trmt13	80	55.464	Gambusia_affinis
ENSGALG00000005290	TRMT13	96	53.173	ENSGACG00000013428	trmt13	97	51.820	Gasterosteus_aculeatus
ENSGALG00000005290	TRMT13	99	75.579	ENSGAGG00000023303	TRMT13	93	84.047	Gopherus_agassizii
ENSGALG00000005290	TRMT13	98	64.756	ENSGGOG00000005616	TRMT13	95	65.495	Gorilla_gorilla
ENSGALG00000005290	TRMT13	96	55.748	ENSHBUG00000007754	trmt13	98	55.799	Haplochromis_burtoni
ENSGALG00000005290	TRMT13	98	65.106	ENSHGLG00000002164	TRMT13	96	65.302	Heterocephalus_glaber_female
ENSGALG00000005290	TRMT13	98	65.106	ENSHGLG00100001618	TRMT13	96	65.302	Heterocephalus_glaber_male
ENSGALG00000005290	TRMT13	95	50.110	ENSHCOG00000020553	trmt13	97	49.782	Hippocampus_comes
ENSGALG00000005290	TRMT13	98	57.974	ENSIPUG00000024787	trmt13	96	57.589	Ictalurus_punctatus
ENSGALG00000005290	TRMT13	98	65.745	ENSSTOG00000013483	TRMT13	95	66.960	Ictidomys_tridecemlineatus
ENSGALG00000005290	TRMT13	99	62.994	ENSJJAG00000018012	Trmt13	97	63.519	Jaculus_jaculus
ENSGALG00000005290	TRMT13	64	50.799	ENSKMAG00000007639	trmt13	92	50.836	Kryptolebias_marmoratus
ENSGALG00000005290	TRMT13	96	51.812	ENSLBEG00000020238	trmt13	98	51.183	Labrus_bergylta
ENSGALG00000005290	TRMT13	99	62.526	ENSLACG00000013153	TRMT13	100	63.317	Latimeria_chalumnae
ENSGALG00000005290	TRMT13	98	59.101	ENSLOCG00000000418	trmt13	96	58.980	Lepisosteus_oculatus
ENSGALG00000005290	TRMT13	76	66.393	ENSLAFG00000002383	TRMT13	99	66.485	Loxodonta_africana
ENSGALG00000005290	TRMT13	98	64.756	ENSMFAG00000034681	TRMT13	95	65.495	Macaca_fascicularis
ENSGALG00000005290	TRMT13	98	64.756	ENSMMUG00000004243	TRMT13	95	65.495	Macaca_mulatta
ENSGALG00000005290	TRMT13	98	64.756	ENSMNEG00000036102	TRMT13	95	65.495	Macaca_nemestrina
ENSGALG00000005290	TRMT13	98	65.180	ENSMLEG00000034258	TRMT13	95	65.934	Mandrillus_leucophaeus
ENSGALG00000005290	TRMT13	97	52.778	ENSMAMG00000016597	trmt13	95	53.057	Mastacembelus_armatus
ENSGALG00000005290	TRMT13	96	55.315	ENSMZEG00005020959	trmt13	98	55.217	Maylandia_zebra
ENSGALG00000005290	TRMT13	89	93.587	ENSMGAG00000006970	TRMT13	100	93.365	Meleagris_gallopavo
ENSGALG00000005290	TRMT13	99	64.968	ENSMAUG00000010448	Trmt13	94	66.300	Mesocricetus_auratus
ENSGALG00000005290	TRMT13	99	65.263	ENSMICG00000005283	TRMT13	95	66.813	Microcebus_murinus
ENSGALG00000005290	TRMT13	98	63.830	ENSMOCG00000019914	Trmt13	94	64.758	Microtus_ochrogaster
ENSGALG00000005290	TRMT13	55	52.830	ENSMMOG00000007762	trmt13	88	52.308	Mola_mola
ENSGALG00000005290	TRMT13	96	66.594	ENSMODG00000003646	TRMT13	95	66.377	Monodelphis_domestica
ENSGALG00000005290	TRMT13	96	51.549	ENSMALG00000020965	trmt13	96	51.106	Monopterus_albus
ENSGALG00000005290	TRMT13	98	63.539	MGP_CAROLIEiJ_G0025568	Trmt13	91	71.779	Mus_caroli
ENSGALG00000005290	TRMT13	98	64.179	ENSMUSG00000033439	Trmt13	91	73.006	Mus_musculus
ENSGALG00000005290	TRMT13	98	63.753	MGP_PahariEiJ_G0027014	Trmt13	91	72.393	Mus_pahari
ENSGALG00000005290	TRMT13	98	64.179	MGP_SPRETEiJ_G0026518	Trmt13	91	73.006	Mus_spretus
ENSGALG00000005290	TRMT13	78	64.865	ENSMPUG00000002078	-	98	64.343	Mustela_putorius_furo
ENSGALG00000005290	TRMT13	98	62.047	ENSMLUG00000002124	TRMT13	94	62.914	Myotis_lucifugus
ENSGALG00000005290	TRMT13	99	49.469	ENSNBRG00000006783	trmt13	96	51.641	Neolamprologus_brichardi
ENSGALG00000005290	TRMT13	98	64.544	ENSNLEG00000035917	TRMT13	95	65.275	Nomascus_leucogenys
ENSGALG00000005290	TRMT13	65	70.370	ENSOPRG00000012048	TRMT13	62	72.549	Ochotona_princeps
ENSGALG00000005290	TRMT13	99	53.249	ENSONIG00000004574	trmt13	97	55.044	Oreochromis_niloticus
ENSGALG00000005290	TRMT13	89	66.745	ENSOANG00000012057	TRMT13	99	65.197	Ornithorhynchus_anatinus
ENSGALG00000005290	TRMT13	98	64.619	ENSOCUG00000023095	TRMT13	95	65.570	Oryctolagus_cuniculus
ENSGALG00000005290	TRMT13	96	49.134	ENSORLG00000003320	trmt13	98	49.891	Oryzias_latipes
ENSGALG00000005290	TRMT13	96	50.435	ENSORLG00020005972	trmt13	96	50.000	Oryzias_latipes_hni
ENSGALG00000005290	TRMT13	96	53.247	ENSORLG00015002270	trmt13	98	53.159	Oryzias_latipes_hsok
ENSGALG00000005290	TRMT13	96	53.813	ENSOMEG00000006724	trmt13	93	53.275	Oryzias_melastigma
ENSGALG00000005290	TRMT13	98	65.106	ENSOGAG00000005618	TRMT13	93	66.017	Otolemur_garnettii
ENSGALG00000005290	TRMT13	98	66.030	ENSOARG00000017983	TRMT13	95	67.033	Ovis_aries
ENSGALG00000005290	TRMT13	98	64.968	ENSPPAG00000043736	TRMT13	95	65.714	Pan_paniscus
ENSGALG00000005290	TRMT13	98	65.745	ENSPPRG00000003424	TRMT13	95	67.253	Panthera_pardus
ENSGALG00000005290	TRMT13	98	65.745	ENSPTIG00000018598	TRMT13	95	67.253	Panthera_tigris_altaica
ENSGALG00000005290	TRMT13	99	64.482	ENSPTRG00000001001	TRMT13	95	65.284	Pan_troglodytes
ENSGALG00000005290	TRMT13	98	65.180	ENSPANG00000007598	TRMT13	95	65.934	Papio_anubis
ENSGALG00000005290	TRMT13	96	56.674	ENSPKIG00000001514	trmt13	97	56.071	Paramormyrops_kingsleyae
ENSGALG00000005290	TRMT13	87	76.812	ENSPSIG00000012703	TRMT13	99	76.812	Pelodiscus_sinensis
ENSGALG00000005290	TRMT13	96	52.723	ENSPMGG00000013298	trmt13	93	53.057	Periophthalmus_magnuspinnatus
ENSGALG00000005290	TRMT13	99	62.292	ENSPEMG00000000275	Trmt13	96	63.578	Peromyscus_maniculatus_bairdii
ENSGALG00000005290	TRMT13	95	47.746	ENSPMAG00000000823	trmt13	96	47.619	Petromyzon_marinus
ENSGALG00000005290	TRMT13	99	66.457	ENSPCIG00000007699	TRMT13	96	67.896	Phascolarctos_cinereus
ENSGALG00000005290	TRMT13	98	51.613	ENSPFOG00000008675	trmt13	95	52.318	Poecilia_formosa
ENSGALG00000005290	TRMT13	96	51.931	ENSPLAG00000009709	trmt13	98	51.732	Poecilia_latipinna
ENSGALG00000005290	TRMT13	96	51.183	ENSPMEG00000022954	trmt13	98	51.193	Poecilia_mexicana
ENSGALG00000005290	TRMT13	80	53.964	ENSPREG00000005645	trmt13	90	55.474	Poecilia_reticulata
ENSGALG00000005290	TRMT13	98	64.544	ENSPPYG00000001120	TRMT13	95	65.495	Pongo_abelii
ENSGALG00000005290	TRMT13	98	64.151	ENSPCAG00000002340	TRMT13	95	65.152	Procavia_capensis
ENSGALG00000005290	TRMT13	98	65.605	ENSPCOG00000017984	TRMT13	95	66.374	Propithecus_coquereli
ENSGALG00000005290	TRMT13	99	64.315	ENSPVAG00000017430	TRMT13	96	65.451	Pteropus_vampyrus
ENSGALG00000005290	TRMT13	96	53.145	ENSPNYG00000013690	trmt13	97	53.173	Pundamilia_nyererei
ENSGALG00000005290	TRMT13	98	57.940	ENSPNAG00000022130	trmt13	97	58.315	Pygocentrus_nattereri
ENSGALG00000005290	TRMT13	96	64.770	ENSRNOG00000015140	Trmt13	92	64.901	Rattus_norvegicus
ENSGALG00000005290	TRMT13	98	65.180	ENSRBIG00000037686	TRMT13	95	65.934	Rhinopithecus_bieti
ENSGALG00000005290	TRMT13	98	65.180	ENSRROG00000044057	TRMT13	95	65.934	Rhinopithecus_roxellana
ENSGALG00000005290	TRMT13	98	64.756	ENSSBOG00000026541	TRMT13	95	65.714	Saimiri_boliviensis_boliviensis
ENSGALG00000005290	TRMT13	89	69.267	ENSSHAG00000005213	TRMT13	95	68.618	Sarcophilus_harrisii
ENSGALG00000005290	TRMT13	97	54.113	ENSSFOG00015017560	trmt13	97	53.930	Scleropages_formosus
ENSGALG00000005290	TRMT13	99	52.391	ENSSMAG00000014592	trmt13	94	53.261	Scophthalmus_maximus
ENSGALG00000005290	TRMT13	99	50.410	ENSSDUG00000015508	trmt13	95	51.168	Seriola_dumerili
ENSGALG00000005290	TRMT13	99	50.719	ENSSLDG00000019060	trmt13	95	51.392	Seriola_lalandi_dorsalis
ENSGALG00000005290	TRMT13	97	59.052	ENSSARG00000010344	TRMT13	96	59.692	Sorex_araneus
ENSGALG00000005290	TRMT13	95	72.284	ENSSPUG00000016339	TRMT13	99	72.026	Sphenodon_punctatus
ENSGALG00000005290	TRMT13	96	53.043	ENSSPAG00000011922	trmt13	98	52.371	Stegastes_partitus
ENSGALG00000005290	TRMT13	98	65.817	ENSSSCG00000006869	TRMT13	95	66.813	Sus_scrofa
ENSGALG00000005290	TRMT13	96	79.470	ENSTGUG00000005253	TRMT13	97	79.510	Taeniopygia_guttata
ENSGALG00000005290	TRMT13	95	51.522	ENSTRUG00000008400	trmt13	98	50.972	Takifugu_rubripes
ENSGALG00000005290	TRMT13	85	53.808	ENSTBEG00000008911	TRMT13	99	53.659	Tupaia_belangeri
ENSGALG00000005290	TRMT13	50	71.622	ENSTTRG00000015302	-	59	72.857	Tursiops_truncatus
ENSGALG00000005290	TRMT13	96	63.399	ENSUAMG00000017251	TRMT13	95	63.319	Ursus_americanus
ENSGALG00000005290	TRMT13	96	66.449	ENSUMAG00000007901	TRMT13	98	67.139	Ursus_maritimus
ENSGALG00000005290	TRMT13	88	53.791	ENSVPAG00000001034	TRMT13	99	53.286	Vicugna_pacos
ENSGALG00000005290	TRMT13	96	66.885	ENSVVUG00000021996	TRMT13	94	67.033	Vulpes_vulpes
ENSGALG00000005290	TRMT13	98	59.483	ENSXETG00000013204	trmt13	96	59.645	Xenopus_tropicalis
ENSGALG00000005290	TRMT13	96	50.858	ENSXMAG00000010765	trmt13	98	50.649	Xiphophorus_maculatus