EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000005395 (Gene tree)
Gene ID: 426805
Gene Symbol: POLR1E
Alias: FLJ13390|FLJ13970|PAF53|PRAF1
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 15461 bases
Position: chrZ:81832191-81847651
Accession: 426805
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000008649	RNA_pol_I_A49	PF06870.12	4.4e-103	1	1
ENSGALP00000061339	RNA_pol_I_A49	PF06870.12	5.7e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000008663	POLR1E-201	4427	-	ENSGALP00000008649	413 (aa)	XP_424416	F1NXA7
ENSGALT00000089022	POLR1E-202	4430	-	ENSGALP00000061339	445 (aa)	-	A0A1L1RRA1

Gene Model

Click here to download ENSGALG00000005395's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000005395's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000005395	POLR1E	99	61.017	ENSG00000137054	POLR1E	99	61.017	Homo_sapiens
ENSGALG00000005395	POLR1E	99	42.417	ENSAPOG00000012452	polr1e	99	42.417	Acanthochromis_polyacanthus
ENSGALG00000005395	POLR1E	100	55.870	ENSAMEG00000010193	POLR1E	96	55.870	Ailuropoda_melanoleuca
ENSGALG00000005395	POLR1E	95	46.193	ENSACIG00000009884	polr1e	99	46.193	Amphilophus_citrinellus
ENSGALG00000005395	POLR1E	99	45.261	ENSAOCG00000005665	polr1e	99	45.261	Amphiprion_ocellaris
ENSGALG00000005395	POLR1E	99	45.261	ENSAPEG00000020581	polr1e	99	45.261	Amphiprion_percula
ENSGALG00000005395	POLR1E	98	45.985	ENSATEG00000020609	polr1e	98	46.117	Anabas_testudineus
ENSGALG00000005395	POLR1E	81	79.790	ENSAPLG00000010340	POLR1E	100	79.790	Anas_platyrhynchos
ENSGALG00000005395	POLR1E	99	60.775	ENSANAG00000038046	POLR1E	99	60.775	Aotus_nancymaae
ENSGALG00000005395	POLR1E	99	45.238	ENSACLG00000013685	polr1e	99	45.238	Astatotilapia_calliptera
ENSGALG00000005395	POLR1E	96	41.832	ENSAMXG00000018181	polr1e	96	41.832	Astyanax_mexicanus
ENSGALG00000005395	POLR1E	99	62.530	ENSBTAG00000012243	POLR1E	98	62.530	Bos_taurus
ENSGALG00000005395	POLR1E	96	57.071	ENSCJAG00000010512	POLR1E	92	61.518	Callithrix_jacchus
ENSGALG00000005395	POLR1E	99	62.470	ENSCAFG00000002377	POLR1E	99	62.470	Canis_familiaris
ENSGALG00000005395	POLR1E	99	62.712	ENSCAFG00020017851	POLR1E	99	62.712	Canis_lupus_dingo
ENSGALG00000005395	POLR1E	99	61.557	ENSCHIG00000019479	POLR1E	98	61.557	Capra_hircus
ENSGALG00000005395	POLR1E	99	60.048	ENSTSYG00000002075	POLR1E	99	60.048	Carlito_syrichta
ENSGALG00000005395	POLR1E	70	63.793	ENSCAPG00000015653	POLR1E	99	63.793	Cavia_aperea
ENSGALG00000005395	POLR1E	99	63.196	ENSCPOG00000009965	POLR1E	98	63.196	Cavia_porcellus
ENSGALG00000005395	POLR1E	99	56.068	ENSCCAG00000029460	POLR1E	98	56.068	Cebus_capucinus
ENSGALG00000005395	POLR1E	99	61.017	ENSCATG00000031732	POLR1E	99	61.062	Cercocebus_atys
ENSGALG00000005395	POLR1E	87	63.611	ENSCLAG00000012701	POLR1E	94	63.611	Chinchilla_lanigera
ENSGALG00000005395	POLR1E	99	60.775	ENSCSAG00000010782	POLR1E	99	60.775	Chlorocebus_sabaeus
ENSGALG00000005395	POLR1E	96	53.535	ENSCHOG00000013024	POLR1E	84	53.250	Choloepus_hoffmanni
ENSGALG00000005395	POLR1E	99	72.993	ENSCPBG00000006923	POLR1E	99	72.993	Chrysemys_picta_bellii
ENSGALG00000005395	POLR1E	99	61.017	ENSCANG00000036112	POLR1E	99	61.883	Colobus_angolensis_palliatus
ENSGALG00000005395	POLR1E	99	59.466	ENSCGRG00001006197	Polr1e	95	59.466	Cricetulus_griseus_chok1gshd
ENSGALG00000005395	POLR1E	99	58.981	ENSCGRG00000006430	Polr1e	95	58.981	Cricetulus_griseus_crigri
ENSGALG00000005395	POLR1E	99	45.673	ENSCSEG00000005121	polr1e	99	45.673	Cynoglossus_semilaevis
ENSGALG00000005395	POLR1E	98	44.769	ENSCVAG00000019759	polr1e	98	44.769	Cyprinodon_variegatus
ENSGALG00000005395	POLR1E	96	41.750	ENSDARG00000006434	polr1e	99	41.304	Danio_rerio
ENSGALG00000005395	POLR1E	99	53.261	ENSDNOG00000010257	POLR1E	98	53.261	Dasypus_novemcinctus
ENSGALG00000005395	POLR1E	86	60.393	ENSETEG00000018204	POLR1E	99	60.393	Echinops_telfairi
ENSGALG00000005395	POLR1E	55	37.121	ENSEBUG00000010635	-	80	37.121	Eptatretus_burgeri
ENSGALG00000005395	POLR1E	99	61.501	ENSEASG00005000675	POLR1E	99	61.501	Equus_asinus_asinus
ENSGALG00000005395	POLR1E	99	61.501	ENSECAG00000014669	POLR1E	99	61.501	Equus_caballus
ENSGALG00000005395	POLR1E	96	53.652	ENSEEUG00000011928	POLR1E	84	53.807	Erinaceus_europaeus
ENSGALG00000005395	POLR1E	99	44.976	ENSELUG00000008150	polr1e	98	44.976	Esox_lucius
ENSGALG00000005395	POLR1E	99	62.954	ENSFCAG00000013081	POLR1E	99	62.954	Felis_catus
ENSGALG00000005395	POLR1E	95	81.425	ENSFALG00000012950	POLR1E	99	81.425	Ficedula_albicollis
ENSGALG00000005395	POLR1E	99	60.964	ENSFDAG00000016917	POLR1E	99	60.964	Fukomys_damarensis
ENSGALG00000005395	POLR1E	99	43.510	ENSFHEG00000009801	polr1e	99	43.510	Fundulus_heteroclitus
ENSGALG00000005395	POLR1E	94	36.683	ENSGMOG00000003336	POLR1E	94	36.683	Gadus_morhua
ENSGALG00000005395	POLR1E	99	42.548	ENSGAFG00000004850	polr1e	99	42.548	Gambusia_affinis
ENSGALG00000005395	POLR1E	99	41.135	ENSGACG00000016087	polr1e	99	41.135	Gasterosteus_aculeatus
ENSGALG00000005395	POLR1E	99	62.162	ENSGAGG00000001659	POLR1E	98	62.044	Gopherus_agassizii
ENSGALG00000005395	POLR1E	99	61.017	ENSGGOG00000001882	POLR1E	99	61.062	Gorilla_gorilla
ENSGALG00000005395	POLR1E	99	45.606	ENSHBUG00000002559	polr1e	99	45.606	Haplochromis_burtoni
ENSGALG00000005395	POLR1E	99	61.205	ENSHGLG00000002036	POLR1E	99	61.205	Heterocephalus_glaber_female
ENSGALG00000005395	POLR1E	99	61.446	ENSHGLG00100012784	POLR1E	99	61.446	Heterocephalus_glaber_male
ENSGALG00000005395	POLR1E	98	43.796	ENSHCOG00000002774	polr1e	98	43.796	Hippocampus_comes
ENSGALG00000005395	POLR1E	99	42.553	ENSIPUG00000003019	polr1e	99	42.553	Ictalurus_punctatus
ENSGALG00000005395	POLR1E	99	60.533	ENSSTOG00000009810	POLR1E	99	60.533	Ictidomys_tridecemlineatus
ENSGALG00000005395	POLR1E	99	61.259	ENSJJAG00000020731	Polr1e	95	61.259	Jaculus_jaculus
ENSGALG00000005395	POLR1E	99	43.095	ENSKMAG00000000046	polr1e	99	43.095	Kryptolebias_marmoratus
ENSGALG00000005395	POLR1E	98	44.665	ENSLBEG00000003104	polr1e	96	44.853	Labrus_bergylta
ENSGALG00000005395	POLR1E	86	56.944	ENSLACG00000003416	POLR1E	99	56.944	Latimeria_chalumnae
ENSGALG00000005395	POLR1E	99	49.275	ENSLOCG00000012859	polr1e	98	49.275	Lepisosteus_oculatus
ENSGALG00000005395	POLR1E	99	60.533	ENSLAFG00000012831	POLR1E	98	60.533	Loxodonta_africana
ENSGALG00000005395	POLR1E	100	60.870	ENSMFAG00000045465	POLR1E	99	61.062	Macaca_fascicularis
ENSGALG00000005395	POLR1E	99	61.017	ENSMMUG00000017892	POLR1E	99	61.062	Macaca_mulatta
ENSGALG00000005395	POLR1E	100	56.132	ENSMNEG00000040283	POLR1E	99	56.132	Macaca_nemestrina
ENSGALG00000005395	POLR1E	99	61.259	ENSMLEG00000031135	POLR1E	99	61.259	Mandrillus_leucophaeus
ENSGALG00000005395	POLR1E	98	45.499	ENSMAMG00000001260	polr1e	97	45.499	Mastacembelus_armatus
ENSGALG00000005395	POLR1E	99	45.238	ENSMZEG00005021536	polr1e	99	45.238	Maylandia_zebra
ENSGALG00000005395	POLR1E	99	59.322	ENSMAUG00000021044	Polr1e	95	59.322	Mesocricetus_auratus
ENSGALG00000005395	POLR1E	99	62.470	ENSMICG00000003673	POLR1E	99	62.470	Microcebus_murinus
ENSGALG00000005395	POLR1E	99	61.071	ENSMOCG00000012920	Polr1e	95	61.071	Microtus_ochrogaster
ENSGALG00000005395	POLR1E	95	44.444	ENSMMOG00000007391	polr1e	98	44.030	Mola_mola
ENSGALG00000005395	POLR1E	96	63.568	ENSMODG00000002884	POLR1E	98	63.568	Monodelphis_domestica
ENSGALG00000005395	POLR1E	99	44.104	ENSMALG00000002665	polr1e	99	44.104	Monopterus_albus
ENSGALG00000005395	POLR1E	100	58.354	MGP_CAROLIEiJ_G0025967	Polr1e	98	59.241	Mus_caroli
ENSGALG00000005395	POLR1E	100	58.213	ENSMUSG00000028318	Polr1e	97	59.137	Mus_musculus
ENSGALG00000005395	POLR1E	99	58.838	MGP_PahariEiJ_G0024114	Polr1e	97	59.796	Mus_pahari
ENSGALG00000005395	POLR1E	100	57.971	MGP_SPRETEiJ_G0026930	Polr1e	98	58.838	Mus_spretus
ENSGALG00000005395	POLR1E	99	56.156	ENSMPUG00000006040	POLR1E	98	56.587	Mustela_putorius_furo
ENSGALG00000005395	POLR1E	99	60.533	ENSMLUG00000012688	POLR1E	95	60.533	Myotis_lucifugus
ENSGALG00000005395	POLR1E	99	60.976	ENSNGAG00000002520	Polr1e	94	60.976	Nannospalax_galili
ENSGALG00000005395	POLR1E	99	45.714	ENSNBRG00000016822	polr1e	99	45.714	Neolamprologus_brichardi
ENSGALG00000005395	POLR1E	99	60.533	ENSNLEG00000003616	POLR1E	99	60.533	Nomascus_leucogenys
ENSGALG00000005395	POLR1E	74	59.556	ENSMEUG00000015372	-	81	59.735	Notamacropus_eugenii
ENSGALG00000005395	POLR1E	86	54.749	ENSOPRG00000014206	POLR1E	99	54.749	Ochotona_princeps
ENSGALG00000005395	POLR1E	99	62.892	ENSODEG00000014565	POLR1E	96	62.892	Octodon_degus
ENSGALG00000005395	POLR1E	99	46.209	ENSONIG00000008921	polr1e	99	45.952	Oreochromis_niloticus
ENSGALG00000005395	POLR1E	99	63.680	ENSOCUG00000024773	POLR1E	99	63.680	Oryctolagus_cuniculus
ENSGALG00000005395	POLR1E	97	44.554	ENSORLG00000005143	polr1e	97	44.554	Oryzias_latipes
ENSGALG00000005395	POLR1E	95	42.785	ENSORLG00020007271	polr1e	98	44.819	Oryzias_latipes_hni
ENSGALG00000005395	POLR1E	97	44.307	ENSORLG00015000137	polr1e	97	44.307	Oryzias_latipes_hsok
ENSGALG00000005395	POLR1E	97	45.545	ENSOMEG00000013264	polr1e	95	45.545	Oryzias_melastigma
ENSGALG00000005395	POLR1E	99	62.712	ENSOGAG00000012981	POLR1E	96	62.712	Otolemur_garnettii
ENSGALG00000005395	POLR1E	99	62.044	ENSOARG00000011465	POLR1E	95	62.044	Ovis_aries
ENSGALG00000005395	POLR1E	99	60.775	ENSPPAG00000034566	POLR1E	99	61.062	Pan_paniscus
ENSGALG00000005395	POLR1E	99	63.438	ENSPPRG00000005649	POLR1E	99	63.438	Panthera_pardus
ENSGALG00000005395	POLR1E	99	63.680	ENSPTIG00000009774	POLR1E	99	63.680	Panthera_tigris_altaica
ENSGALG00000005395	POLR1E	99	60.775	ENSPTRG00000020944	POLR1E	99	61.062	Pan_troglodytes
ENSGALG00000005395	POLR1E	99	61.017	ENSPANG00000025563	POLR1E	99	61.062	Papio_anubis
ENSGALG00000005395	POLR1E	99	46.209	ENSPKIG00000003562	polr1e	99	46.445	Paramormyrops_kingsleyae
ENSGALG00000005395	POLR1E	95	64.885	ENSPSIG00000003274	POLR1E	92	65.217	Pelodiscus_sinensis
ENSGALG00000005395	POLR1E	95	45.636	ENSPMGG00000024169	polr1e	97	45.185	Periophthalmus_magnuspinnatus
ENSGALG00000005395	POLR1E	99	47.330	ENSPEMG00000022300	-	94	47.330	Peromyscus_maniculatus_bairdii
ENSGALG00000005395	POLR1E	99	59.902	ENSPEMG00000019151	-	94	59.902	Peromyscus_maniculatus_bairdii
ENSGALG00000005395	POLR1E	96	63.568	ENSPCIG00000014798	POLR1E	98	63.568	Phascolarctos_cinereus
ENSGALG00000005395	POLR1E	99	42.404	ENSPFOG00000019627	polr1e	99	42.404	Poecilia_formosa
ENSGALG00000005395	POLR1E	99	44.630	ENSPLAG00000022679	polr1e	99	44.630	Poecilia_latipinna
ENSGALG00000005395	POLR1E	87	45.753	ENSPMEG00000022123	polr1e	93	45.753	Poecilia_mexicana
ENSGALG00000005395	POLR1E	99	43.333	ENSPREG00000009470	polr1e	99	43.333	Poecilia_reticulata
ENSGALG00000005395	POLR1E	99	60.291	ENSPPYG00000019061	POLR1E	99	60.291	Pongo_abelii
ENSGALG00000005395	POLR1E	57	58.475	ENSPCAG00000004891	POLR1E	77	58.475	Procavia_capensis
ENSGALG00000005395	POLR1E	99	61.985	ENSPCOG00000027448	POLR1E	99	61.985	Propithecus_coquereli
ENSGALG00000005395	POLR1E	95	61.772	ENSPVAG00000007940	POLR1E	84	61.404	Pteropus_vampyrus
ENSGALG00000005395	POLR1E	99	45.476	ENSPNYG00000001032	polr1e	99	45.476	Pundamilia_nyererei
ENSGALG00000005395	POLR1E	99	41.687	ENSPNAG00000006987	polr1e	99	41.687	Pygocentrus_nattereri
ENSGALG00000005395	POLR1E	100	59.420	ENSRNOG00000012664	Polr1e	95	59.420	Rattus_norvegicus
ENSGALG00000005395	POLR1E	98	61.386	ENSRBIG00000034214	POLR1E	99	62.368	Rhinopithecus_bieti
ENSGALG00000005395	POLR1E	99	61.259	ENSRROG00000031986	POLR1E	99	61.259	Rhinopithecus_roxellana
ENSGALG00000005395	POLR1E	99	60.533	ENSSBOG00000021415	POLR1E	99	60.533	Saimiri_boliviensis_boliviensis
ENSGALG00000005395	POLR1E	86	61.732	ENSSHAG00000016084	POLR1E	99	61.732	Sarcophilus_harrisii
ENSGALG00000005395	POLR1E	99	45.985	ENSSFOG00015002293	polr1e	99	45.985	Scleropages_formosus
ENSGALG00000005395	POLR1E	98	45.966	ENSSMAG00000011672	polr1e	90	45.966	Scophthalmus_maximus
ENSGALG00000005395	POLR1E	98	44.819	ENSSDUG00000022279	polr1e	97	44.819	Seriola_dumerili
ENSGALG00000005395	POLR1E	98	44.552	ENSSLDG00000024918	polr1e	97	44.552	Seriola_lalandi_dorsalis
ENSGALG00000005395	POLR1E	56	56.277	ENSSARG00000009810	-	58	56.277	Sorex_araneus
ENSGALG00000005395	POLR1E	99	68.357	ENSSPUG00000009499	POLR1E	99	68.357	Sphenodon_punctatus
ENSGALG00000005395	POLR1E	99	45.714	ENSSPAG00000021240	polr1e	99	45.714	Stegastes_partitus
ENSGALG00000005395	POLR1E	100	62.802	ENSSSCG00000005347	POLR1E	99	62.802	Sus_scrofa
ENSGALG00000005395	POLR1E	95	67.269	ENSTGUG00000007169	POLR1E	100	67.269	Taeniopygia_guttata
ENSGALG00000005395	POLR1E	99	43.645	ENSTRUG00000020779	polr1e	99	45.144	Takifugu_rubripes
ENSGALG00000005395	POLR1E	99	43.269	ENSTNIG00000017812	polr1e	99	43.269	Tetraodon_nigroviridis
ENSGALG00000005395	POLR1E	95	63.104	ENSTBEG00000013786	POLR1E	84	63.104	Tupaia_belangeri
ENSGALG00000005395	POLR1E	95	62.312	ENSTTRG00000008294	POLR1E	86	61.787	Tursiops_truncatus
ENSGALG00000005395	POLR1E	99	61.501	ENSUAMG00000012474	POLR1E	99	63.812	Ursus_americanus
ENSGALG00000005395	POLR1E	99	61.501	ENSUMAG00000011496	POLR1E	99	61.501	Ursus_maritimus
ENSGALG00000005395	POLR1E	83	59.064	ENSVPAG00000009048	POLR1E	82	58.671	Vicugna_pacos
ENSGALG00000005395	POLR1E	99	63.196	ENSVVUG00000019954	POLR1E	99	63.196	Vulpes_vulpes
ENSGALG00000005395	POLR1E	99	52.785	ENSXETG00000006533	polr1e	99	52.785	Xenopus_tropicalis
ENSGALG00000005395	POLR1E	98	44.118	ENSXCOG00000013706	polr1e	98	44.118	Xiphophorus_couchianus
ENSGALG00000005395	POLR1E	99	44.391	ENSXMAG00000012484	polr1e	99	44.391	Xiphophorus_maculatus