EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000005567 (Gene tree)
Gene ID: 417667
Gene Symbol: MSI2
Alias: -
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 183966 bases
Position: chr19:8923405-9107370
Accession: 417667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000008916	RRM_1	PF00076.22	3.3e-34	1	2
ENSGALP00000008916	RRM_1	PF00076.22	3.3e-34	2	2
ENSGALP00000070636	RRM_1	PF00076.22	2.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000094299	MSI2-201	1281	-	ENSGALP00000070636	426 (aa)	-	-
ENSGALT00000008930	MSI2-202	1505	-	ENSGALP00000008916	346 (aa)	XP_015151661	E1C1R8

Gene Model

Click here to download ENSGALG00000005567's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000005567's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000005567	MSI2	94	98.457	ENSG00000153944	MSI2	100	98.457	Homo_sapiens
ENSGALG00000005567	MSI2	100	87.320	ENSAPOG00000001658	msi2a	100	86.895	Acanthochromis_polyacanthus
ENSGALG00000005567	MSI2	94	98.462	ENSAMEG00000002697	MSI2	99	98.462	Ailuropoda_melanoleuca
ENSGALG00000005567	MSI2	100	73.980	ENSACIG00000009475	msi2a	100	73.980	Amphilophus_citrinellus
ENSGALG00000005567	MSI2	55	75.333	ENSAOCG00000014822	msi2a	69	75.333	Amphiprion_ocellaris
ENSGALG00000005567	MSI2	100	87.320	ENSAPEG00000007706	msi2a	100	86.895	Amphiprion_percula
ENSGALG00000005567	MSI2	100	87.320	ENSATEG00000010498	msi2a	100	86.895	Anabas_testudineus
ENSGALG00000005567	MSI2	94	88.514	ENSATEG00000003301	-	100	88.514	Anabas_testudineus
ENSGALG00000005567	MSI2	94	71.105	ENSACAG00000005452	MSI2	68	98.370	Anolis_carolinensis
ENSGALG00000005567	MSI2	100	91.329	ENSANAG00000037827	MSI2	100	91.329	Aotus_nancymaae
ENSGALG00000005567	MSI2	100	87.032	ENSACLG00000007752	msi2a	100	86.610	Astatotilapia_calliptera
ENSGALG00000005567	MSI2	100	84.971	ENSAMXG00000010474	msi2b	100	84.971	Astyanax_mexicanus
ENSGALG00000005567	MSI2	100	89.049	ENSAMXG00000032796	msi2a	100	85.838	Astyanax_mexicanus
ENSGALG00000005567	MSI2	94	92.615	ENSBTAG00000004406	MSI2	97	92.615	Bos_taurus
ENSGALG00000005567	MSI2	66	61.570	WBGene00003423	msi-1	76	61.570	Caenorhabditis_elegans
ENSGALG00000005567	MSI2	100	91.329	ENSCJAG00000013998	MSI2	100	91.329	Callithrix_jacchus
ENSGALG00000005567	MSI2	94	97.179	ENSCAFG00020025620	MSI2	81	97.179	Canis_lupus_dingo
ENSGALG00000005567	MSI2	100	90.462	ENSCHIG00000016580	MSI2	100	90.462	Capra_hircus
ENSGALG00000005567	MSI2	94	88.000	ENSCPOG00000034042	MSI2	99	88.000	Cavia_porcellus
ENSGALG00000005567	MSI2	100	91.329	ENSCCAG00000033927	MSI2	100	91.329	Cebus_capucinus
ENSGALG00000005567	MSI2	96	92.470	ENSCATG00000040879	MSI2	100	90.462	Cercocebus_atys
ENSGALG00000005567	MSI2	100	96.532	ENSCLAG00000014325	MSI2	100	96.532	Chinchilla_lanigera
ENSGALG00000005567	MSI2	100	91.329	ENSCSAG00000005633	MSI2	100	91.329	Chlorocebus_sabaeus
ENSGALG00000005567	MSI2	71	96.078	ENSCHOG00000008660	MSI2	83	96.078	Choloepus_hoffmanni
ENSGALG00000005567	MSI2	94	94.020	ENSCPBG00000009942	MSI2	96	94.020	Chrysemys_picta_bellii
ENSGALG00000005567	MSI2	60	72.000	ENSCING00000018579	-	97	49.583	Ciona_intestinalis
ENSGALG00000005567	MSI2	62	66.667	ENSCSAVG00000010397	-	72	65.517	Ciona_savignyi
ENSGALG00000005567	MSI2	94	98.457	ENSCANG00000036414	MSI2	100	98.457	Colobus_angolensis_palliatus
ENSGALG00000005567	MSI2	100	90.778	ENSCGRG00001013330	Msi2	100	90.778	Cricetulus_griseus_chok1gshd
ENSGALG00000005567	MSI2	94	98.160	ENSCGRG00000003141	Msi2	100	98.160	Cricetulus_griseus_crigri
ENSGALG00000005567	MSI2	79	68.868	ENSCSEG00000013557	msi2a	83	67.453	Cynoglossus_semilaevis
ENSGALG00000005567	MSI2	54	72.826	ENSCSEG00000013549	msi2a	100	72.826	Cynoglossus_semilaevis
ENSGALG00000005567	MSI2	100	77.168	ENSCSEG00000003266	-	100	77.168	Cynoglossus_semilaevis
ENSGALG00000005567	MSI2	100	87.032	ENSCVAG00000017075	msi2a	100	86.610	Cyprinodon_variegatus
ENSGALG00000005567	MSI2	93	88.509	ENSDARG00000032614	msi2b	100	98.020	Danio_rerio
ENSGALG00000005567	MSI2	100	79.124	ENSDARG00000033901	msi2a	100	79.124	Danio_rerio
ENSGALG00000005567	MSI2	94	92.484	ENSDNOG00000014501	MSI2	100	92.484	Dasypus_novemcinctus
ENSGALG00000005567	MSI2	79	80.930	ENSDORG00000005394	Msi2	84	80.000	Dipodomys_ordii
ENSGALG00000005567	MSI2	97	59.270	FBgn0260943	Rbp6	95	60.393	Drosophila_melanogaster
ENSGALG00000005567	MSI2	64	75.658	ENSETEG00000012450	-	64	75.658	Echinops_telfairi
ENSGALG00000005567	MSI2	89	68.810	ENSEBUG00000006732	msi2a	87	68.489	Eptatretus_burgeri
ENSGALG00000005567	MSI2	94	87.702	ENSEASG00005002965	MSI2	97	87.714	Equus_asinus_asinus
ENSGALG00000005567	MSI2	100	94.068	ENSECAG00000011435	MSI2	100	94.068	Equus_caballus
ENSGALG00000005567	MSI2	83	77.860	ENSEEUG00000007810	MSI2	100	77.860	Erinaceus_europaeus
ENSGALG00000005567	MSI2	100	84.104	ENSELUG00000011747	msi2a	100	84.104	Esox_lucius
ENSGALG00000005567	MSI2	100	87.714	ENSELUG00000001361	msi2b	100	87.714	Esox_lucius
ENSGALG00000005567	MSI2	54	76.282	ENSFCAG00000033787	-	82	76.282	Felis_catus
ENSGALG00000005567	MSI2	100	91.329	ENSFCAG00000041686	MSI2	100	91.329	Felis_catus
ENSGALG00000005567	MSI2	94	98.462	ENSFDAG00000016118	MSI2	100	98.462	Fukomys_damarensis
ENSGALG00000005567	MSI2	100	87.032	ENSFHEG00000000084	msi2a	96	92.105	Fundulus_heteroclitus
ENSGALG00000005567	MSI2	53	91.346	ENSGMOG00000007596	-	100	91.346	Gadus_morhua
ENSGALG00000005567	MSI2	96	75.074	ENSGAFG00000006974	msi2a	90	92.715	Gambusia_affinis
ENSGALG00000005567	MSI2	94	96.382	ENSGAGG00000016542	MSI2	100	96.382	Gopherus_agassizii
ENSGALG00000005567	MSI2	94	98.457	ENSGGOG00000013182	MSI2	100	98.457	Gorilla_gorilla
ENSGALG00000005567	MSI2	100	87.032	ENSHBUG00000020800	msi2a	100	86.610	Haplochromis_burtoni
ENSGALG00000005567	MSI2	100	87.572	ENSHGLG00000012444	MSI2	100	87.572	Heterocephalus_glaber_female
ENSGALG00000005567	MSI2	76	98.551	ENSHGLG00100003744	MSI2	100	98.551	Heterocephalus_glaber_male
ENSGALG00000005567	MSI2	76	81.369	ENSHCOG00000017241	-	70	89.071	Hippocampus_comes
ENSGALG00000005567	MSI2	97	84.615	ENSHCOG00000000266	msi2a	97	84.211	Hippocampus_comes
ENSGALG00000005567	MSI2	96	88.589	ENSIPUG00000003732	msi2b	100	81.214	Ictalurus_punctatus
ENSGALG00000005567	MSI2	100	83.237	ENSIPUG00000021097	msi2a	100	83.237	Ictalurus_punctatus
ENSGALG00000005567	MSI2	94	88.000	ENSSTOG00000007884	MSI2	99	88.000	Ictidomys_tridecemlineatus
ENSGALG00000005567	MSI2	76	88.406	ENSJJAG00000006292	-	100	87.923	Jaculus_jaculus
ENSGALG00000005567	MSI2	96	85.586	ENSKMAG00000009494	msi2a	96	85.843	Kryptolebias_marmoratus
ENSGALG00000005567	MSI2	94	69.795	ENSLBEG00000026223	-	100	69.795	Labrus_bergylta
ENSGALG00000005567	MSI2	100	82.659	ENSLBEG00000007061	msi2a	100	82.659	Labrus_bergylta
ENSGALG00000005567	MSI2	100	82.429	ENSLOCG00000004675	msi2b	100	83.740	Lepisosteus_oculatus
ENSGALG00000005567	MSI2	94	98.457	ENSMFAG00000003775	MSI2	100	98.457	Macaca_fascicularis
ENSGALG00000005567	MSI2	94	98.457	ENSMMUG00000002069	MSI2	100	98.457	Macaca_mulatta
ENSGALG00000005567	MSI2	100	91.329	ENSMNEG00000045275	MSI2	100	91.329	Macaca_nemestrina
ENSGALG00000005567	MSI2	94	98.457	ENSMLEG00000033888	MSI2	100	98.457	Mandrillus_leucophaeus
ENSGALG00000005567	MSI2	100	93.625	ENSMAMG00000002488	-	99	93.377	Mastacembelus_armatus
ENSGALG00000005567	MSI2	100	84.375	ENSMAMG00000010503	msi2a	100	84.943	Mastacembelus_armatus
ENSGALG00000005567	MSI2	100	86.705	ENSMZEG00005007676	msi2a	100	86.705	Maylandia_zebra
ENSGALG00000005567	MSI2	100	95.965	ENSMAUG00000003862	Msi2	100	95.965	Mesocricetus_auratus
ENSGALG00000005567	MSI2	100	73.775	ENSMICG00000032913	-	100	72.334	Microcebus_murinus
ENSGALG00000005567	MSI2	100	91.329	ENSMICG00000013598	-	100	91.329	Microcebus_murinus
ENSGALG00000005567	MSI2	100	96.243	ENSMOCG00000005820	Msi2	100	96.243	Microtus_ochrogaster
ENSGALG00000005567	MSI2	90	81.155	ENSMMOG00000008348	msi2a	91	82.317	Mola_mola
ENSGALG00000005567	MSI2	76	99.034	ENSMODG00000014790	MSI2	100	99.034	Monodelphis_domestica
ENSGALG00000005567	MSI2	100	87.320	ENSMALG00000000071	msi2a	100	92.157	Monopterus_albus
ENSGALG00000005567	MSI2	100	96.243	MGP_CAROLIEiJ_G0016948	Msi2	100	98.230	Mus_caroli
ENSGALG00000005567	MSI2	100	96.243	ENSMUSG00000069769	Msi2	100	98.230	Mus_musculus
ENSGALG00000005567	MSI2	100	96.243	MGP_PahariEiJ_G0018079	Msi2	100	98.230	Mus_pahari
ENSGALG00000005567	MSI2	100	96.243	MGP_SPRETEiJ_G0017795	Msi2	100	98.230	Mus_spretus
ENSGALG00000005567	MSI2	94	92.923	ENSMPUG00000015377	MSI2	97	92.923	Mustela_putorius_furo
ENSGALG00000005567	MSI2	94	92.615	ENSMLUG00000007865	MSI2	97	92.615	Myotis_lucifugus
ENSGALG00000005567	MSI2	100	96.243	ENSNGAG00000017807	Msi2	100	96.243	Nannospalax_galili
ENSGALG00000005567	MSI2	100	82.370	ENSNBRG00000014596	msi2a	92	92.763	Neolamprologus_brichardi
ENSGALG00000005567	MSI2	94	98.392	ENSNLEG00000008059	MSI2	100	98.392	Nomascus_leucogenys
ENSGALG00000005567	MSI2	64	88.158	ENSOPRG00000000872	-	64	88.158	Ochotona_princeps
ENSGALG00000005567	MSI2	100	96.532	ENSODEG00000011974	MSI2	100	96.532	Octodon_degus
ENSGALG00000005567	MSI2	55	92.715	ENSONIG00000001972	msi2a	84	92.715	Oreochromis_niloticus
ENSGALG00000005567	MSI2	92	99.454	ENSOANG00000005667	MSI2	74	99.111	Ornithorhynchus_anatinus
ENSGALG00000005567	MSI2	94	92.923	ENSOCUG00000010440	MSI2	97	92.923	Oryctolagus_cuniculus
ENSGALG00000005567	MSI2	99	84.593	ENSORLG00000009671	msi2a	98	84.593	Oryzias_latipes
ENSGALG00000005567	MSI2	94	88.344	ENSORLG00020021556	msi2a	95	87.879	Oryzias_latipes_hni
ENSGALG00000005567	MSI2	99	84.593	ENSORLG00015004592	msi2a	98	84.593	Oryzias_latipes_hsok
ENSGALG00000005567	MSI2	100	81.214	ENSOMEG00000000146	msi2a	98	86.207	Oryzias_melastigma
ENSGALG00000005567	MSI2	94	88.615	ENSOGAG00000005621	MSI2	99	88.615	Otolemur_garnettii
ENSGALG00000005567	MSI2	94	98.457	ENSPPAG00000037697	MSI2	100	98.457	Pan_paniscus
ENSGALG00000005567	MSI2	94	92.923	ENSPPRG00000001848	MSI2	91	97.758	Panthera_pardus
ENSGALG00000005567	MSI2	68	78.481	ENSPTIG00000021873	-	90	78.481	Panthera_tigris_altaica
ENSGALG00000005567	MSI2	94	98.392	ENSPTIG00000021678	MSI2	96	98.392	Panthera_tigris_altaica
ENSGALG00000005567	MSI2	94	98.457	ENSPTRG00000009437	MSI2	100	98.457	Pan_troglodytes
ENSGALG00000005567	MSI2	100	91.329	ENSPANG00000022319	MSI2	100	91.329	Papio_anubis
ENSGALG00000005567	MSI2	100	80.376	ENSPKIG00000007038	-	100	79.301	Paramormyrops_kingsleyae
ENSGALG00000005567	MSI2	100	76.543	ENSPSIG00000008618	MSI2	87	96.642	Pelodiscus_sinensis
ENSGALG00000005567	MSI2	100	82.081	ENSPMGG00000005888	msi2a	100	82.081	Periophthalmus_magnuspinnatus
ENSGALG00000005567	MSI2	100	95.480	ENSPCIG00000006063	MSI2	100	95.480	Phascolarctos_cinereus
ENSGALG00000005567	MSI2	54	89.524	ENSPFOG00000019337	MSI2	92	89.524	Poecilia_formosa
ENSGALG00000005567	MSI2	55	88.811	ENSPLAG00000000436	msi2a	76	89.437	Poecilia_latipinna
ENSGALG00000005567	MSI2	55	78.322	ENSPMEG00000013247	msi2a	80	78.322	Poecilia_mexicana
ENSGALG00000005567	MSI2	99	80.347	ENSPREG00000000881	msi2a	99	80.347	Poecilia_reticulata
ENSGALG00000005567	MSI2	94	88.672	ENSPPYG00000008244	-	100	88.672	Pongo_abelii
ENSGALG00000005567	MSI2	74	64.453	ENSPCAG00000010552	MSI2	100	64.453	Procavia_capensis
ENSGALG00000005567	MSI2	94	84.244	ENSPVAG00000017053	MSI2	100	84.244	Pteropus_vampyrus
ENSGALG00000005567	MSI2	100	86.705	ENSPNYG00000018393	msi2a	100	86.705	Pundamilia_nyererei
ENSGALG00000005567	MSI2	100	84.438	ENSPNAG00000000844	msi2b	100	82.081	Pygocentrus_nattereri
ENSGALG00000005567	MSI2	100	89.049	ENSPNAG00000014957	msi2a	100	86.705	Pygocentrus_nattereri
ENSGALG00000005567	MSI2	94	92.230	ENSRNOG00000025338	Msi2	100	92.230	Rattus_norvegicus
ENSGALG00000005567	MSI2	94	98.457	ENSSBOG00000026425	MSI2	100	98.457	Saimiri_boliviensis_boliviensis
ENSGALG00000005567	MSI2	94	99.074	ENSSHAG00000008672	MSI2	100	99.074	Sarcophilus_harrisii
ENSGALG00000005567	MSI2	100	62.935	ENSSFOG00015012168	msi2b	82	82.449	Scleropages_formosus
ENSGALG00000005567	MSI2	94	84.308	ENSSFOG00015021687	-	97	81.846	Scleropages_formosus
ENSGALG00000005567	MSI2	100	87.320	ENSSMAG00000018484	msi2a	100	86.895	Scophthalmus_maximus
ENSGALG00000005567	MSI2	100	87.320	ENSSDUG00000014507	msi2a	100	86.895	Seriola_dumerili
ENSGALG00000005567	MSI2	100	83.526	ENSSDUG00000021968	-	99	92.715	Seriola_dumerili
ENSGALG00000005567	MSI2	100	82.659	ENSSLDG00000017172	msi2a	100	82.659	Seriola_lalandi_dorsalis
ENSGALG00000005567	MSI2	55	93.671	ENSSPUG00000000913	-	94	93.671	Sphenodon_punctatus
ENSGALG00000005567	MSI2	100	77.208	ENSSPAG00000017793	msi2a	100	76.923	Stegastes_partitus
ENSGALG00000005567	MSI2	100	94.068	ENSSSCG00000038505	MSI2	97	98.462	Sus_scrofa
ENSGALG00000005567	MSI2	76	99.517	ENSTGUG00000008452	MSI2	100	99.517	Taeniopygia_guttata
ENSGALG00000005567	MSI2	100	81.586	ENSTRUG00000021248	msi2a	100	81.586	Takifugu_rubripes
ENSGALG00000005567	MSI2	70	79.339	ENSTBEG00000001241	MSI2	73	79.339	Tupaia_belangeri
ENSGALG00000005567	MSI2	94	83.203	ENSTTRG00000002189	MSI2	100	83.203	Tursiops_truncatus
ENSGALG00000005567	MSI2	94	92.923	ENSUAMG00000000700	MSI2	97	92.923	Ursus_americanus
ENSGALG00000005567	MSI2	90	84.452	ENSUMAG00000000505	MSI2	100	83.860	Ursus_maritimus
ENSGALG00000005567	MSI2	53	83.516	ENSVPAG00000006837	-	62	83.516	Vicugna_pacos
ENSGALG00000005567	MSI2	100	96.532	ENSVVUG00000011783	MSI2	100	96.532	Vulpes_vulpes
ENSGALG00000005567	MSI2	100	77.461	ENSXCOG00000006113	msi2a	100	77.461	Xiphophorus_couchianus
ENSGALG00000005567	MSI2	100	87.032	ENSXMAG00000000608	msi2a	100	86.610	Xiphophorus_maculatus