EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSGALG00000005753 (Gene tree)
Gene ID
422214
Gene Symbol
-
Alias
-
Full Name
nuclear cap binding protein subunit 2%2C 20kDa
Gene Type
protein_coding
Species
Gallus_gallus
Status
putative
Strand
Minus strand
Length
3421 bases
Position
chr4:2439653-2443073
Accession
422214
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGALP00000009225RRM_1PF00076.229.8e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGALT00000009239-1909-ENSGALP00000009225168 (aa)-Q5ZKR5
Gene Model
Click here to download ENSGALG00000005753's gene model file
Pathways
Pathway IDPathway NameSource
gga03013RNA transportKEGG
gga03015mRNA surveillance pathwayKEGG
gga03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000005753's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGALG00000005753-9577.358ENSG00000114503NCBP29985.366Homo_sapiens
ENSGALG00000005753-8964.667ENSG00000170935NCBP2L9764.667Homo_sapiens
ENSGALG00000005753-9575.472ENSAPOG00000016180ncbp29775.472Acanthochromis_polyacanthus
ENSGALG00000005753-8562.238ENSAMEG00000018655NCBP2L9362.238Ailuropoda_melanoleuca
ENSGALG00000005753-9577.358ENSAMEG00000003664-10077.358Ailuropoda_melanoleuca
ENSGALG00000005753-8753.425ENSAMEG00000019790-9553.425Ailuropoda_melanoleuca
ENSGALG00000005753-9574.843ENSACIG00000010008ncbp29774.843Amphilophus_citrinellus
ENSGALG00000005753-8079.851ENSAOCG00000002198ncbp27379.851Amphiprion_ocellaris
ENSGALG00000005753-9575.472ENSAPEG00000013395ncbp29775.472Amphiprion_percula
ENSGALG00000005753-9574.214ENSATEG00000021649ncbp29774.214Anabas_testudineus
ENSGALG00000005753-8398.571ENSAPLG00000013779-10098.571Anas_platyrhynchos
ENSGALG00000005753-7876.336ENSAPLG00000014522-10076.336Anas_platyrhynchos
ENSGALG00000005753-10086.905ENSACAG00000015128-10086.905Anolis_carolinensis
ENSGALG00000005753-9577.358ENSANAG00000018285NCBP210077.358Aotus_nancymaae
ENSGALG00000005753-9575.472ENSACLG00000026775ncbp29775.472Astatotilapia_calliptera
ENSGALG00000005753-9674.074ENSAMXG00000041812ncbp29674.074Astyanax_mexicanus
ENSGALG00000005753-9577.358ENSBTAG00000008873NCBP210077.358Bos_taurus
ENSGALG00000005753-8962.667WBGene00009141ncbp-210068.132Caenorhabditis_elegans
ENSGALG00000005753-9577.358ENSCJAG00000039693NCBP210077.358Callithrix_jacchus
ENSGALG00000005753-9577.358ENSCAFG00000013100NCBP210077.358Canis_familiaris
ENSGALG00000005753-9363.694ENSCAFG00000017990NCBP2L9663.694Canis_familiaris
ENSGALG00000005753-8866.216ENSCAFG00020006690NCBP2L9366.216Canis_lupus_dingo
ENSGALG00000005753-9577.358ENSCAFG00020003010-10077.358Canis_lupus_dingo
ENSGALG00000005753-8848.299ENSCAFG00020004265-9448.299Canis_lupus_dingo
ENSGALG00000005753-9577.358ENSCHIG00000025737-10077.358Capra_hircus
ENSGALG00000005753-7951.128ENSCHIG00000018869-9151.128Capra_hircus
ENSGALG00000005753-8660.690ENSCHIG00000020051NCBP2L9260.690Capra_hircus
ENSGALG00000005753-9577.358ENSTSYG00000014263-10077.358Carlito_syrichta
ENSGALG00000005753-9577.358ENSCPOG00000002976NCBP210077.358Cavia_porcellus
ENSGALG00000005753-9577.358ENSCCAG00000025053NCBP210077.358Cebus_capucinus
ENSGALG00000005753-9577.358ENSCATG00000030004NCBP210077.358Cercocebus_atys
ENSGALG00000005753-9577.358ENSCLAG00000012808NCBP210077.358Chinchilla_lanigera
ENSGALG00000005753-9377.707ENSCSAG00000008705NCBP26677.707Chlorocebus_sabaeus
ENSGALG00000005753-8964.667ENSCSAG00000000310NCBP2L9764.667Chlorocebus_sabaeus
ENSGALG00000005753-9076.821ENSCHOG00000005967-9776.821Choloepus_hoffmanni
ENSGALG00000005753-10089.881ENSCPBG00000016711-10089.881Chrysemys_picta_bellii
ENSGALG00000005753-9176.471ENSCPBG00000004735-9776.471Chrysemys_picta_bellii
ENSGALG00000005753-9471.519ENSCING00000018317-8571.519Ciona_intestinalis
ENSGALG00000005753-9468.987ENSCSAVG00000005823-8568.987Ciona_savignyi
ENSGALG00000005753-7978.788ENSCANG00000039404NCBP29678.788Colobus_angolensis_palliatus
ENSGALG00000005753-9577.358ENSCGRG00001017056Ncbp210077.358Cricetulus_griseus_chok1gshd
ENSGALG00000005753-9577.358ENSCGRG00000014761Ncbp210077.358Cricetulus_griseus_crigri
ENSGALG00000005753-9774.847ENSCSEG00000019322ncbp29674.847Cynoglossus_semilaevis
ENSGALG00000005753-9874.390ENSCVAG00000012766ncbp210074.390Cyprinodon_variegatus
ENSGALG00000005753-9177.124ENSDARG00000014898ncbp29977.124Danio_rerio
ENSGALG00000005753-7978.788ENSDNOG00000047711NCBP29478.788Dasypus_novemcinctus
ENSGALG00000005753-9259.740ENSDNOG00000004831NCBP2L9959.740Dasypus_novemcinctus
ENSGALG00000005753-9577.358ENSDORG00000028653Ncbp210077.358Dipodomys_ordii
ENSGALG00000005753-8576.923FBgn0022943Cbp209376.923Drosophila_melanogaster
ENSGALG00000005753-7653.906ENSETEG00000006407-9853.906Echinops_telfairi
ENSGALG00000005753-7978.195ENSEBUG00000001862-6178.195Eptatretus_burgeri
ENSGALG00000005753-9577.358ENSEASG00005006719NCBP210077.358Equus_asinus_asinus
ENSGALG00000005753-8759.732ENSEASG00005019772NCBP2L8862.416Equus_asinus_asinus
ENSGALG00000005753-8459.722ENSECAG00000003478NCBP2L9662.500Equus_caballus
ENSGALG00000005753-9577.358ENSECAG00000016153NCBP210077.358Equus_caballus
ENSGALG00000005753-8351.799ENSEEUG00000004605NCBP2L9151.799Erinaceus_europaeus
ENSGALG00000005753-9076.316ENSELUG00000018927ncbp29876.316Esox_lucius
ENSGALG00000005753-9577.358ENSFCAG00000029865NCBP210077.358Felis_catus
ENSGALG00000005753-9076.316ENSFALG00000007099-9776.316Ficedula_albicollis
ENSGALG00000005753-8395.000ENSFALG00000011928-10095.000Ficedula_albicollis
ENSGALG00000005753-9079.470ENSFDAG00000010403NCBP29779.470Fukomys_damarensis
ENSGALG00000005753-9874.390ENSFHEG00000002308ncbp210074.390Fundulus_heteroclitus
ENSGALG00000005753-9672.222ENSGMOG00000018657ncbp29972.222Gadus_morhua
ENSGALG00000005753-9275.974ENSGALG00000006843NCBP29776.316Gallus_gallus
ENSGALG00000005753-9872.561ENSGAFG00000010213ncbp210072.561Gambusia_affinis
ENSGALG00000005753-9571.698ENSGACG00000006238ncbp29671.698Gasterosteus_aculeatus
ENSGALG00000005753-10089.881ENSGAGG00000015966-10089.881Gopherus_agassizii
ENSGALG00000005753-9176.471ENSGAGG00000025839-9776.471Gopherus_agassizii
ENSGALG00000005753-8964.000ENSGGOG00000014581NCBP2L9764.000Gorilla_gorilla
ENSGALG00000005753-7978.788ENSGGOG00000042244NCBP29678.788Gorilla_gorilla
ENSGALG00000005753-9575.472ENSHBUG00000003914ncbp28375.472Haplochromis_burtoni
ENSGALG00000005753-7970.677ENSHGLG00000003263-8170.677Heterocephalus_glaber_female
ENSGALG00000005753-9577.987ENSHGLG00000019489NCBP210077.987Heterocephalus_glaber_female
ENSGALG00000005753-9577.987ENSHGLG00100017688NCBP210077.987Heterocephalus_glaber_male
ENSGALG00000005753-9356.329ENSHGLG00100015318-10056.329Heterocephalus_glaber_male
ENSGALG00000005753-9558.750ENSHGLG00100018377-9558.750Heterocephalus_glaber_male
ENSGALG00000005753-9574.843ENSHCOG00000000679ncbp210074.843Hippocampus_comes
ENSGALG00000005753-9577.358ENSSTOG00000001584NCBP210077.358Ictidomys_tridecemlineatus
ENSGALG00000005753-7977.273ENSJJAG00000013908Ncbp28177.273Jaculus_jaculus
ENSGALG00000005753-9574.843ENSKMAG00000009686ncbp29774.843Kryptolebias_marmoratus
ENSGALG00000005753-9572.327ENSLBEG00000020441ncbp29772.327Labrus_bergylta
ENSGALG00000005753-9577.987ENSLACG00000017474ncbp29777.987Latimeria_chalumnae
ENSGALG00000005753-9157.419ENSLACG00000015184-9957.419Latimeria_chalumnae
ENSGALG00000005753-9673.292ENSLOCG00000001518ncbp29673.292Lepisosteus_oculatus
ENSGALG00000005753-8973.826ENSLAFG00000027581NCBP2L9473.826Loxodonta_africana
ENSGALG00000005753-9576.730ENSLAFG00000006372NCBP210076.730Loxodonta_africana
ENSGALG00000005753-9577.358ENSMFAG00000001109NCBP210077.358Macaca_fascicularis
ENSGALG00000005753-9377.707ENSMMUG00000007825NCBP29678.788Macaca_mulatta
ENSGALG00000005753-9577.358ENSMNEG00000040649NCBP210077.358Macaca_nemestrina
ENSGALG00000005753-9575.472ENSMAMG00000011314ncbp29775.472Mastacembelus_armatus
ENSGALG00000005753-9575.472ENSMZEG00005017982ncbp29775.472Maylandia_zebra
ENSGALG00000005753-8399.286ENSMGAG00000002257-10099.286Meleagris_gallopavo
ENSGALG00000005753-9577.358ENSMAUG00000021481Ncbp210077.358Mesocricetus_auratus
ENSGALG00000005753-8477.305ENSMICG00000012328-9377.305Microcebus_murinus
ENSGALG00000005753-9078.808ENSMICG00000049214NCBP210083.721Microcebus_murinus
ENSGALG00000005753-9577.358ENSMOCG00000021390Ncbp210077.358Microtus_ochrogaster
ENSGALG00000005753-9076.974ENSMMOG00000004234ncbp29376.974Mola_mola
ENSGALG00000005753-9574.214ENSMODG00000024608-10074.214Monodelphis_domestica
ENSGALG00000005753-9574.214ENSMODG00000024607-10074.214Monodelphis_domestica
ENSGALG00000005753-9577.358ENSMODG00000023276-10077.358Monodelphis_domestica
ENSGALG00000005753-9475.949ENSMODG00000015908-9975.949Monodelphis_domestica
ENSGALG00000005753-9577.358MGP_CAROLIEiJ_G0020659Ncbp210077.358Mus_caroli
ENSGALG00000005753-9577.358ENSMUSG00000022774Ncbp210077.358Mus_musculus
ENSGALG00000005753-9577.358MGP_PahariEiJ_G0016363Ncbp210077.358Mus_pahari
ENSGALG00000005753-9577.358MGP_SPRETEiJ_G0021555Ncbp210077.358Mus_spretus
ENSGALG00000005753-8768.493ENSMPUG00000018445NCBP2L9468.493Mustela_putorius_furo
ENSGALG00000005753-9577.500ENSMPUG00000003806NCBP29677.500Mustela_putorius_furo
ENSGALG00000005753-9078.808ENSMLUG00000017500NCBP29778.808Myotis_lucifugus
ENSGALG00000005753-6564.220ENSMLUG00000022217-9664.220Myotis_lucifugus
ENSGALG00000005753-9577.358ENSNGAG00000011678Ncbp210077.358Nannospalax_galili
ENSGALG00000005753-9572.781ENSNLEG00000001727NCBP29678.788Nomascus_leucogenys
ENSGALG00000005753-9577.358ENSMEUG00000008126-10077.358Notamacropus_eugenii
ENSGALG00000005753-9278.065ENSMEUG00000004730-9778.065Notamacropus_eugenii
ENSGALG00000005753-9550.943ENSOPRG00000006943-10050.943Ochotona_princeps
ENSGALG00000005753-9576.101ENSOPRG00000007634-10076.101Ochotona_princeps
ENSGALG00000005753-8175.000ENSODEG00000009435-9575.000Octodon_degus
ENSGALG00000005753-9570.552ENSODEG00000013562-10070.552Octodon_degus
ENSGALG00000005753-8667.347ENSODEG00000002405-8467.347Octodon_degus
ENSGALG00000005753-9569.182ENSODEG00000014452-10069.182Octodon_degus
ENSGALG00000005753-9576.101ENSONIG00000008314ncbp29776.101Oreochromis_niloticus
ENSGALG00000005753-5060.714ENSOANG00000011325-7860.714Ornithorhynchus_anatinus
ENSGALG00000005753-9577.358ENSOCUG00000006738NCBP210077.358Oryctolagus_cuniculus
ENSGALG00000005753-9574.214ENSORLG00000011235ncbp29774.214Oryzias_latipes
ENSGALG00000005753-9574.214ENSORLG00020006739ncbp29774.214Oryzias_latipes_hni
ENSGALG00000005753-9574.214ENSORLG00015004376ncbp29774.214Oryzias_latipes_hsok
ENSGALG00000005753-9575.472ENSOMEG00000010498ncbp29775.472Oryzias_melastigma
ENSGALG00000005753-9577.358ENSOGAG00000005009NCBP210077.358Otolemur_garnettii
ENSGALG00000005753-8658.333ENSOARG00000006784-9258.333Ovis_aries
ENSGALG00000005753-9577.358ENSOARG00000020367-10077.358Ovis_aries
ENSGALG00000005753-7978.788ENSPPAG00000036789-9678.788Pan_paniscus
ENSGALG00000005753-8865.541ENSPPRG00000010989NCBP2L9765.541Panthera_pardus
ENSGALG00000005753-9577.358ENSPPRG00000005533NCBP210083.721Panthera_pardus
ENSGALG00000005753-9577.358ENSPTIG00000009963NCBP210077.358Panthera_tigris_altaica
ENSGALG00000005753-8864.865ENSPTIG00000005892NCBP2L9764.865Panthera_tigris_altaica
ENSGALG00000005753-9572.327ENSPTRG00000048726NCBP210072.327Pan_troglodytes
ENSGALG00000005753-9574.214ENSPKIG00000025196ncbp29774.214Paramormyrops_kingsleyae
ENSGALG00000005753-8389.286ENSPSIG00000008535-10089.286Pelodiscus_sinensis
ENSGALG00000005753-7978.030ENSPSIG00000009533-10078.030Pelodiscus_sinensis
ENSGALG00000005753-9576.101ENSPMGG00000023837ncbp29776.101Periophthalmus_magnuspinnatus
ENSGALG00000005753-9076.159ENSPMAG00000007450ncbp29076.159Petromyzon_marinus
ENSGALG00000005753-9575.625ENSPCIG00000005127-10075.625Phascolarctos_cinereus
ENSGALG00000005753-9972.455ENSPFOG00000014473ncbp210072.455Poecilia_formosa
ENSGALG00000005753-9873.171ENSPLAG00000022463ncbp210073.171Poecilia_latipinna
ENSGALG00000005753-9873.780ENSPMEG00000018372ncbp210073.780Poecilia_mexicana
ENSGALG00000005753-9873.171ENSPREG00000021643ncbp210073.171Poecilia_reticulata
ENSGALG00000005753-8964.000ENSPPYG00000020614NCBP2L9764.000Pongo_abelii
ENSGALG00000005753-9577.358ENSPPYG00000014449NCBP28377.358Pongo_abelii
ENSGALG00000005753-9577.358ENSPCAG00000003219NCBP210077.358Procavia_capensis
ENSGALG00000005753-9078.808ENSPCOG00000017267NCBP29778.808Propithecus_coquereli
ENSGALG00000005753-9576.730ENSPVAG00000017273NCBP210076.730Pteropus_vampyrus
ENSGALG00000005753-9575.472ENSPNYG00000015623ncbp29775.472Pundamilia_nyererei
ENSGALG00000005753-9675.776ENSPNAG00000005941ncbp29875.776Pygocentrus_nattereri
ENSGALG00000005753-9577.358ENSRNOG00000048589Ncbp210077.358Rattus_norvegicus
ENSGALG00000005753-9577.358ENSRNOG00000001746Ncbp210077.358Rattus_norvegicus
ENSGALG00000005753-9576.730ENSRBIG00000028514NCBP210083.721Rhinopithecus_bieti
ENSGALG00000005753-9576.730ENSRROG00000032530-10076.730Rhinopithecus_roxellana
ENSGALG00000005753-6760.714YPL178WCBC25460.714Saccharomyces_cerevisiae
ENSGALG00000005753-9553.459ENSSBOG00000006326-10053.459Saimiri_boliviensis_boliviensis
ENSGALG00000005753-7978.788ENSSHAG00000004363-10078.788Sarcophilus_harrisii
ENSGALG00000005753-9577.358ENSSHAG00000012279-10077.358Sarcophilus_harrisii
ENSGALG00000005753-9378.205ENSSFOG00015014972ncbp29578.205Scleropages_formosus
ENSGALG00000005753-9774.847ENSSMAG00000020056ncbp29674.847Scophthalmus_maximus
ENSGALG00000005753-9574.843ENSSDUG00000015448ncbp29774.843Seriola_dumerili
ENSGALG00000005753-9574.214ENSSLDG00000020381ncbp28074.214Seriola_lalandi_dorsalis
ENSGALG00000005753-9572.956ENSSARG00000014294NCBP210072.956Sorex_araneus
ENSGALG00000005753-9268.831ENSSPUG00000016545-8779.200Sphenodon_punctatus
ENSGALG00000005753-8983.444ENSSPUG00000000715-9283.444Sphenodon_punctatus
ENSGALG00000005753-9278.065ENSSPAG00000021582ncbp29578.065Stegastes_partitus
ENSGALG00000005753-9577.358ENSSSCG00000027323NCBP210077.358Sus_scrofa
ENSGALG00000005753-8370.000ENSSSCG00000012562NCBP2L9270.000Sus_scrofa
ENSGALG00000005753-9076.316ENSTGUG00000008864-9776.316Taeniopygia_guttata
ENSGALG00000005753-7696.094ENSTGUG00000007323-10096.094Taeniopygia_guttata
ENSGALG00000005753-9573.585ENSTRUG00000018355ncbp29773.585Takifugu_rubripes
ENSGALG00000005753-9275.484ENSTNIG00000006065ncbp29975.484Tetraodon_nigroviridis
ENSGALG00000005753-8177.941ENSTBEG00000015222NCBP210077.941Tupaia_belangeri
ENSGALG00000005753-9377.707ENSTTRG00000013908NCBP29977.707Tursiops_truncatus
ENSGALG00000005753-9562.264ENSUAMG00000006936NCBP2L9662.264Ursus_americanus
ENSGALG00000005753-8278.102ENSUAMG00000023879NCBP28278.102Ursus_americanus
ENSGALG00000005753-9562.264ENSUMAG00000010623NCBP2L9662.264Ursus_maritimus
ENSGALG00000005753-9577.358ENSUMAG00000003147NCBP210077.358Ursus_maritimus
ENSGALG00000005753-7779.231ENSVPAG00000010369NCBP210079.231Vicugna_pacos
ENSGALG00000005753-9577.358ENSVVUG00000008595NCBP210077.358Vulpes_vulpes
ENSGALG00000005753-9345.223ENSVVUG00000009790-8745.223Vulpes_vulpes
ENSGALG00000005753-8982.000ENSXETG00000019384ncbp29682.000Xenopus_tropicalis
ENSGALG00000005753-9873.171ENSXCOG00000010968ncbp210073.171Xiphophorus_couchianus
ENSGALG00000005753-9873.171ENSXMAG00000010096ncbp210073.171Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000184nuclear-transcribed mRNA catabolic process, nonsense-mediated decay-IEAProcess
GO:0000339RNA cap binding21873635.IBAFunction
GO:0000340RNA 7-methylguanosine cap binding-ISSFunction
GO:0000398mRNA splicing, via spliceosome21873635.IBAProcess
GO:0003729mRNA binding-ISSFunction
GO:0005634nucleus-IEAComponent
GO:0005737cytoplasm-IEAComponent
GO:0005846nuclear cap binding complex21873635.IBAComponent
GO:0006417regulation of translation-IEAProcess
GO:0017069snRNA binding-ISSFunction
GO:0031047gene silencing by RNA-IEAProcess
GO:0045292mRNA cis splicing, via spliceosome-ISSProcess
GO:0051028mRNA transport-IEAProcess

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