EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000006001 (Gene tree)
Gene ID: 419254
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 23889 bases
Position: chr20:9411755-9435643
Accession: 419254
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000009642	PRP1_N	PF06424.12	1.4e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000009656	PRPF6-201	4744	XM_417426	ENSGALP00000009642	941 (aa)	XP_417426	F1N9U0

Gene Model

Click here to download ENSGALG00000006001's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000006001's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000006001	PRPF6	100	97.237	ENSG00000101161	PRPF6	100	97.237	Homo_sapiens
ENSGALG00000006001	PRPF6	100	92.561	ENSAPOG00000010395	prpf6	96	92.880	Acanthochromis_polyacanthus
ENSGALG00000006001	PRPF6	100	96.709	ENSAMEG00000001916	PRPF6	99	96.709	Ailuropoda_melanoleuca
ENSGALG00000006001	PRPF6	100	92.667	ENSACIG00000019862	prpf6	96	92.986	Amphilophus_citrinellus
ENSGALG00000006001	PRPF6	100	92.667	ENSAOCG00000012988	prpf6	96	92.986	Amphiprion_ocellaris
ENSGALG00000006001	PRPF6	100	86.079	ENSAPEG00000008301	prpf6	100	86.504	Amphiprion_percula
ENSGALG00000006001	PRPF6	100	92.136	ENSATEG00000005581	prpf6	96	92.455	Anabas_testudineus
ENSGALG00000006001	PRPF6	100	98.725	ENSACAG00000006464	PRPF6	95	98.725	Anolis_carolinensis
ENSGALG00000006001	PRPF6	100	97.343	ENSANAG00000012661	PRPF6	100	97.998	Aotus_nancymaae
ENSGALG00000006001	PRPF6	100	92.774	ENSACLG00000025875	prpf6	96	93.092	Astatotilapia_calliptera
ENSGALG00000006001	PRPF6	99	93.191	ENSAMXG00000001929	prpf6	96	93.511	Astyanax_mexicanus
ENSGALG00000006001	PRPF6	100	97.662	ENSBTAG00000011656	PRPF6	100	97.662	Bos_taurus
ENSGALG00000006001	PRPF6	100	97.343	ENSCJAG00000010616	PRPF6	100	97.343	Callithrix_jacchus
ENSGALG00000006001	PRPF6	100	98.193	ENSCAFG00000013165	PRPF6	100	98.193	Canis_familiaris
ENSGALG00000006001	PRPF6	100	98.193	ENSCAFG00020002050	PRPF6	100	98.193	Canis_lupus_dingo
ENSGALG00000006001	PRPF6	100	97.662	ENSCHIG00000018187	PRPF6	100	97.662	Capra_hircus
ENSGALG00000006001	PRPF6	100	97.662	ENSTSYG00000007814	PRPF6	100	97.662	Carlito_syrichta
ENSGALG00000006001	PRPF6	97	96.728	ENSCAPG00000015077	PRPF6	100	96.728	Cavia_aperea
ENSGALG00000006001	PRPF6	100	98.087	ENSCPOG00000007518	PRPF6	100	98.087	Cavia_porcellus
ENSGALG00000006001	PRPF6	100	93.943	ENSCCAG00000024564	PRPF6	100	93.943	Cebus_capucinus
ENSGALG00000006001	PRPF6	100	97.343	ENSCATG00000037473	PRPF6	100	97.343	Cercocebus_atys
ENSGALG00000006001	PRPF6	100	94.261	ENSCLAG00000003854	PRPF6	100	94.261	Chinchilla_lanigera
ENSGALG00000006001	PRPF6	100	92.291	ENSCSAG00000016742	PRPF6	100	92.291	Chlorocebus_sabaeus
ENSGALG00000006001	PRPF6	84	80.976	ENSCHOG00000003315	-	100	80.976	Choloepus_hoffmanni
ENSGALG00000006001	PRPF6	100	98.512	ENSCPBG00000013964	PRPF6	96	98.512	Chrysemys_picta_bellii
ENSGALG00000006001	PRPF6	99	73.996	ENSCING00000008817	-	99	73.996	Ciona_intestinalis
ENSGALG00000006001	PRPF6	100	97.237	ENSCANG00000038230	PRPF6	100	97.237	Colobus_angolensis_palliatus
ENSGALG00000006001	PRPF6	100	98.087	ENSCGRG00001022666	Prpf6	100	98.087	Cricetulus_griseus_chok1gshd
ENSGALG00000006001	PRPF6	100	87.141	ENSCSEG00000018561	prpf6	100	87.460	Cynoglossus_semilaevis
ENSGALG00000006001	PRPF6	100	92.455	ENSCVAG00000010550	prpf6	96	92.774	Cyprinodon_variegatus
ENSGALG00000006001	PRPF6	100	92.561	ENSDARG00000091367	prpf6	99	92.880	Danio_rerio
ENSGALG00000006001	PRPF6	100	97.450	ENSDNOG00000040544	PRPF6	100	97.450	Dasypus_novemcinctus
ENSGALG00000006001	PRPF6	91	97.313	ENSDORG00000005406	Prpf6	100	97.313	Dipodomys_ordii
ENSGALG00000006001	PRPF6	99	72.222	FBgn0036828	CG6841	98	72.650	Drosophila_melanogaster
ENSGALG00000006001	PRPF6	85	95.322	ENSETEG00000004447	PRPF6	85	95.322	Echinops_telfairi
ENSGALG00000006001	PRPF6	99	87.911	ENSEBUG00000008835	prpf6	99	87.911	Eptatretus_burgeri
ENSGALG00000006001	PRPF6	100	97.556	ENSEASG00005023115	PRPF6	100	97.556	Equus_asinus_asinus
ENSGALG00000006001	PRPF6	100	93.305	ENSECAG00000013983	PRPF6	100	93.305	Equus_caballus
ENSGALG00000006001	PRPF6	90	100.000	ENSEEUG00000000180	PRPF6	81	100.000	Erinaceus_europaeus
ENSGALG00000006001	PRPF6	100	91.392	ENSELUG00000001945	prpf6	93	91.392	Esox_lucius
ENSGALG00000006001	PRPF6	100	97.981	ENSFCAG00000001183	PRPF6	100	97.981	Felis_catus
ENSGALG00000006001	PRPF6	100	91.817	ENSFALG00000006046	-	97	91.817	Ficedula_albicollis
ENSGALG00000006001	PRPF6	100	99.469	ENSFALG00000010326	-	97	99.469	Ficedula_albicollis
ENSGALG00000006001	PRPF6	100	96.599	ENSFDAG00000006451	PRPF6	100	97.959	Fukomys_damarensis
ENSGALG00000006001	PRPF6	100	93.518	ENSFHEG00000000560	prpf6	96	93.518	Fundulus_heteroclitus
ENSGALG00000006001	PRPF6	100	89.429	ENSGMOG00000015622	prpf6	99	89.429	Gadus_morhua
ENSGALG00000006001	PRPF6	100	88.204	ENSGAFG00000021109	prpf6	96	88.523	Gambusia_affinis
ENSGALG00000006001	PRPF6	100	91.286	ENSGACG00000002576	prpf6	99	91.286	Gasterosteus_aculeatus
ENSGALG00000006001	PRPF6	100	98.406	ENSGAGG00000008653	PRPF6	96	98.406	Gopherus_agassizii
ENSGALG00000006001	PRPF6	100	97.237	ENSGGOG00000016876	PRPF6	100	97.237	Gorilla_gorilla
ENSGALG00000006001	PRPF6	100	92.774	ENSHBUG00000004496	prpf6	96	93.092	Haplochromis_burtoni
ENSGALG00000006001	PRPF6	100	98.087	ENSHGLG00000009222	PRPF6	100	98.087	Heterocephalus_glaber_female
ENSGALG00000006001	PRPF6	97	98.037	ENSHGLG00100016600	PRPF6	100	98.037	Heterocephalus_glaber_male
ENSGALG00000006001	PRPF6	100	91.392	ENSHCOG00000011513	prpf6	96	91.711	Hippocampus_comes
ENSGALG00000006001	PRPF6	100	93.411	ENSIPUG00000004912	prpf6	96	93.411	Ictalurus_punctatus
ENSGALG00000006001	PRPF6	100	95.223	ENSSTOG00000002922	PRPF6	100	95.223	Ictidomys_tridecemlineatus
ENSGALG00000006001	PRPF6	100	98.087	ENSJJAG00000000836	Prpf6	100	98.087	Jaculus_jaculus
ENSGALG00000006001	PRPF6	100	92.561	ENSKMAG00000017800	prpf6	96	92.880	Kryptolebias_marmoratus
ENSGALG00000006001	PRPF6	100	91.817	ENSLBEG00000012582	prpf6	96	91.711	Labrus_bergylta
ENSGALG00000006001	PRPF6	100	95.005	ENSLOCG00000004827	prpf6	96	93.624	Lepisosteus_oculatus
ENSGALG00000006001	PRPF6	100	97.237	ENSLAFG00000005272	PRPF6	100	97.237	Loxodonta_africana
ENSGALG00000006001	PRPF6	100	97.237	ENSMFAG00000037542	PRPF6	100	97.237	Macaca_fascicularis
ENSGALG00000006001	PRPF6	100	90.764	ENSMMUG00000015558	PRPF6	98	98.960	Macaca_mulatta
ENSGALG00000006001	PRPF6	100	82.839	ENSMNEG00000045555	PRPF6	100	82.839	Macaca_nemestrina
ENSGALG00000006001	PRPF6	100	92.667	ENSMAMG00000010718	prpf6	96	92.986	Mastacembelus_armatus
ENSGALG00000006001	PRPF6	94	92.290	ENSMZEG00005026539	prpf6	100	92.630	Maylandia_zebra
ENSGALG00000006001	PRPF6	100	92.251	ENSMZEG00005015261	-	99	92.569	Maylandia_zebra
ENSGALG00000006001	PRPF6	97	99.782	ENSMGAG00000006634	PRPF6	100	99.782	Meleagris_gallopavo
ENSGALG00000006001	PRPF6	100	98.087	ENSMAUG00000013969	Prpf6	100	98.087	Mesocricetus_auratus
ENSGALG00000006001	PRPF6	87	97.324	ENSMICG00000017793	PRPF6	99	97.324	Microcebus_murinus
ENSGALG00000006001	PRPF6	100	98.087	ENSMOCG00000001701	Prpf6	100	98.087	Microtus_ochrogaster
ENSGALG00000006001	PRPF6	100	91.817	ENSMMOG00000020419	prpf6	100	92.136	Mola_mola
ENSGALG00000006001	PRPF6	99	98.520	ENSMODG00000017051	PRPF6	99	98.520	Monodelphis_domestica
ENSGALG00000006001	PRPF6	99	92.589	ENSMALG00000000089	prpf6	100	92.589	Monopterus_albus
ENSGALG00000006001	PRPF6	100	91.498	MGP_CAROLIEiJ_G0024814	Prpf6	100	98.148	Mus_caroli
ENSGALG00000006001	PRPF6	100	98.087	ENSMUSG00000002455	Prpf6	100	98.148	Mus_musculus
ENSGALG00000006001	PRPF6	100	98.087	MGP_PahariEiJ_G0026262	Prpf6	100	98.148	Mus_pahari
ENSGALG00000006001	PRPF6	100	98.087	MGP_SPRETEiJ_G0025741	Prpf6	100	98.148	Mus_spretus
ENSGALG00000006001	PRPF6	91	97.497	ENSMPUG00000008673	PRPF6	99	97.497	Mustela_putorius_furo
ENSGALG00000006001	PRPF6	100	98.087	ENSNGAG00000003365	Prpf6	100	98.087	Nannospalax_galili
ENSGALG00000006001	PRPF6	100	92.880	ENSNBRG00000015025	prpf6	96	93.199	Neolamprologus_brichardi
ENSGALG00000006001	PRPF6	100	97.343	ENSNLEG00000010208	PRPF6	100	97.343	Nomascus_leucogenys
ENSGALG00000006001	PRPF6	100	89.130	ENSMEUG00000009824	-	90	89.130	Notamacropus_eugenii
ENSGALG00000006001	PRPF6	100	92.030	ENSODEG00000004841	PRPF6	100	92.030	Octodon_degus
ENSGALG00000006001	PRPF6	100	92.774	ENSONIG00000017406	prpf6	96	93.092	Oreochromis_niloticus
ENSGALG00000006001	PRPF6	100	98.512	ENSOANG00000004920	PRPF6	100	98.512	Ornithorhynchus_anatinus
ENSGALG00000006001	PRPF6	99	96.030	ENSOCUG00000014151	PRPF6	100	96.030	Oryctolagus_cuniculus
ENSGALG00000006001	PRPF6	100	92.667	ENSORLG00000009592	prpf6	96	92.667	Oryzias_latipes
ENSGALG00000006001	PRPF6	100	92.774	ENSORLG00020001458	prpf6	96	92.774	Oryzias_latipes_hni
ENSGALG00000006001	PRPF6	100	92.774	ENSORLG00015018762	prpf6	96	92.774	Oryzias_latipes_hsok
ENSGALG00000006001	PRPF6	100	92.349	ENSOMEG00000012174	prpf6	96	92.667	Oryzias_melastigma
ENSGALG00000006001	PRPF6	100	90.234	ENSOGAG00000007573	PRPF6	100	90.234	Otolemur_garnettii
ENSGALG00000006001	PRPF6	100	97.237	ENSOARG00000008776	PRPF6	99	97.237	Ovis_aries
ENSGALG00000006001	PRPF6	100	97.237	ENSPPAG00000008686	PRPF6	100	97.237	Pan_paniscus
ENSGALG00000006001	PRPF6	100	97.875	ENSPPRG00000008497	PRPF6	100	97.875	Panthera_pardus
ENSGALG00000006001	PRPF6	97	97.819	ENSPTIG00000011184	PRPF6	97	97.819	Panthera_tigris_altaica
ENSGALG00000006001	PRPF6	100	97.237	ENSPTRG00000013765	PRPF6	100	97.237	Pan_troglodytes
ENSGALG00000006001	PRPF6	100	97.024	ENSPANG00000024135	PRPF6	100	97.024	Papio_anubis
ENSGALG00000006001	PRPF6	100	94.368	ENSPKIG00000005627	prpf6	99	94.368	Paramormyrops_kingsleyae
ENSGALG00000006001	PRPF6	94	98.526	ENSPSIG00000007717	PRPF6	100	98.526	Pelodiscus_sinensis
ENSGALG00000006001	PRPF6	100	89.915	ENSPMGG00000008925	prpf6	96	90.021	Periophthalmus_magnuspinnatus
ENSGALG00000006001	PRPF6	100	97.981	ENSPEMG00000016036	Prpf6	100	97.981	Peromyscus_maniculatus_bairdii
ENSGALG00000006001	PRPF6	99	88.417	ENSPMAG00000006144	prpf6	99	88.417	Petromyzon_marinus
ENSGALG00000006001	PRPF6	100	98.512	ENSPCIG00000017909	PRPF6	100	98.512	Phascolarctos_cinereus
ENSGALG00000006001	PRPF6	100	92.986	ENSPFOG00000006431	prpf6	96	93.305	Poecilia_formosa
ENSGALG00000006001	PRPF6	100	92.880	ENSPLAG00000005974	prpf6	96	93.199	Poecilia_latipinna
ENSGALG00000006001	PRPF6	100	93.092	ENSPMEG00000009977	prpf6	96	93.411	Poecilia_mexicana
ENSGALG00000006001	PRPF6	100	92.986	ENSPREG00000017993	prpf6	92	93.305	Poecilia_reticulata
ENSGALG00000006001	PRPF6	100	96.706	ENSPPYG00000011256	PRPF6	100	96.706	Pongo_abelii
ENSGALG00000006001	PRPF6	94	99.346	ENSPCAG00000006536	PRPF6	88	99.346	Procavia_capensis
ENSGALG00000006001	PRPF6	100	97.131	ENSPCOG00000016881	PRPF6	100	97.131	Propithecus_coquereli
ENSGALG00000006001	PRPF6	100	91.286	ENSPVAG00000014316	PRPF6	100	91.286	Pteropus_vampyrus
ENSGALG00000006001	PRPF6	100	76.327	ENSPNYG00000001939	prpf6	96	81.509	Pundamilia_nyererei
ENSGALG00000006001	PRPF6	100	93.305	ENSPNAG00000015606	prpf6	96	93.624	Pygocentrus_nattereri
ENSGALG00000006001	PRPF6	100	98.193	ENSRNOG00000051498	Prpf6	100	98.193	Rattus_norvegicus
ENSGALG00000006001	PRPF6	100	97.237	ENSRBIG00000043613	PRPF6	100	97.237	Rhinopithecus_bieti
ENSGALG00000006001	PRPF6	100	93.968	ENSRROG00000040969	PRPF6	98	97.578	Rhinopithecus_roxellana
ENSGALG00000006001	PRPF6	91	93.080	ENSSBOG00000020632	PRPF6	93	93.080	Saimiri_boliviensis_boliviensis
ENSGALG00000006001	PRPF6	100	98.512	ENSSHAG00000016810	PRPF6	100	98.512	Sarcophilus_harrisii
ENSGALG00000006001	PRPF6	99	94.952	ENSSFOG00015020859	prpf6	100	94.952	Scleropages_formosus
ENSGALG00000006001	PRPF6	100	91.605	ENSSMAG00000008112	prpf6	96	91.605	Scophthalmus_maximus
ENSGALG00000006001	PRPF6	100	92.349	ENSSDUG00000016142	prpf6	96	92.667	Seriola_dumerili
ENSGALG00000006001	PRPF6	100	92.349	ENSSLDG00000025283	prpf6	100	89.267	Seriola_lalandi_dorsalis
ENSGALG00000006001	PRPF6	94	97.619	ENSSPUG00000018260	PRPF6	100	97.619	Sphenodon_punctatus
ENSGALG00000006001	PRPF6	100	92.349	ENSSPAG00000015850	prpf6	96	92.667	Stegastes_partitus
ENSGALG00000006001	PRPF6	100	97.237	ENSSSCG00000029119	PRPF6	100	97.052	Sus_scrofa
ENSGALG00000006001	PRPF6	100	99.575	ENSTGUG00000007221	PRPF6	99	99.575	Taeniopygia_guttata
ENSGALG00000006001	PRPF6	100	91.605	ENSTRUG00000002920	prpf6	96	91.923	Takifugu_rubripes
ENSGALG00000006001	PRPF6	100	85.307	ENSTNIG00000017873	prpf6	100	85.624	Tetraodon_nigroviridis
ENSGALG00000006001	PRPF6	89	97.790	ENSTBEG00000005348	PRPF6	85	97.790	Tupaia_belangeri
ENSGALG00000006001	PRPF6	100	97.024	ENSTTRG00000013068	PRPF6	100	97.024	Tursiops_truncatus
ENSGALG00000006001	PRPF6	98	96.196	ENSUMAG00000021631	PRPF6	98	96.196	Ursus_maritimus
ENSGALG00000006001	PRPF6	100	98.193	ENSVVUG00000014948	PRPF6	100	98.193	Vulpes_vulpes
ENSGALG00000006001	PRPF6	100	95.962	ENSXETG00000012054	prpf6	97	95.962	Xenopus_tropicalis
ENSGALG00000006001	PRPF6	100	93.092	ENSXCOG00000008082	prpf6	96	93.411	Xiphophorus_couchianus
ENSGALG00000006001	PRPF6	100	93.092	ENSXMAG00000015581	prpf6	96	93.411	Xiphophorus_maculatus