EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSGALG00000006179 (Gene tree)
Gene ID
395849
Gene Symbol
RPL13
Alias
BBC1
Full Name
Gallus gallus ribosomal protein L13 (RPL13)%2C mRNA.
Gene Type
protein_coding
Species
Gallus_gallus
Status
putative
Strand
Plus strand
Length
4309 bases
Position
chr11:18734052-18738360
Accession
NM_204999
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGALP00000062041Ribosomal_L13ePF01294.181.4e-8211
ENSGALP00000062948Ribosomal_L13ePF01294.181.3e-6711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGALT00000084093-755-ENSGALP00000062041211 (aa)-P41125
ENSGALT00000087881-765-ENSGALP00000062948194 (aa)-P41125
Gene Model
Click here to download ENSGALG00000006179's gene model file
Pathways
Pathway IDPathway NameSource
gga03010RibosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000006179's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGALG00000006179RPL1310092.417ENSG00000167526RPL1310092.857Homo_sapiens
ENSGALG00000006179RPL1310090.521ENSAPOG00000010933rpl1310090.521Acanthochromis_polyacanthus
ENSGALG00000006179RPL1310080.569ENSAMEG00000001111RPL1310082.075Ailuropoda_melanoleuca
ENSGALG00000006179RPL1310089.573ENSACIG00000000422rpl1310089.573Amphilophus_citrinellus
ENSGALG00000006179RPL1310090.521ENSAOCG00000014635rpl1310090.521Amphiprion_ocellaris
ENSGALG00000006179RPL1310090.047ENSAPEG00000011271rpl1310090.047Amphiprion_percula
ENSGALG00000006179RPL1310089.573ENSATEG00000004902rpl1310089.573Anabas_testudineus
ENSGALG00000006179RPL1310092.891ENSACAG00000017072RPL1310092.891Anolis_carolinensis
ENSGALG00000006179RPL1310092.891ENSANAG00000030539RPL1310092.891Aotus_nancymaae
ENSGALG00000006179RPL1310089.573ENSACLG00000001642rpl1310089.573Astatotilapia_calliptera
ENSGALG00000006179RPL1310086.730ENSAMXG00000006495rpl1310086.730Astyanax_mexicanus
ENSGALG00000006179RPL1310091.943ENSBTAG00000012044RPL137291.943Bos_taurus
ENSGALG00000006179RPL1310082.464ENSBTAG00000033143-10082.464Bos_taurus
ENSGALG00000006179RPL139857.282WBGene00004425rpl-139957.282Caenorhabditis_elegans
ENSGALG00000006179RPL139992.381ENSCJAG00000016268-9992.381Callithrix_jacchus
ENSGALG00000006179RPL1310092.891ENSCJAG00000009672-10092.891Callithrix_jacchus
ENSGALG00000006179RPL1310093.365ENSCAFG00000019840RPL1310093.365Canis_familiaris
ENSGALG00000006179RPL138859.064ENSCAFG00000002388-10057.923Canis_familiaris
ENSGALG00000006179RPL139967.308ENSCAFG00020024795-9367.308Canis_lupus_dingo
ENSGALG00000006179RPL1310093.365ENSCAFG00020005125RPL1310093.365Canis_lupus_dingo
ENSGALG00000006179RPL1310091.943ENSCHIG00000001441-10091.943Capra_hircus
ENSGALG00000006179RPL139586.070ENSCHIG00000017227-8786.070Capra_hircus
ENSGALG00000006179RPL1310076.303ENSCHIG00000026795-9276.303Capra_hircus
ENSGALG00000006179RPL1310091.943ENSTSYG00000027423RPL1310091.943Carlito_syrichta
ENSGALG00000006179RPL1310093.365ENSCPOG00000027348RPL1310093.365Cavia_porcellus
ENSGALG00000006179RPL1310092.891ENSCCAG00000024248RPL1310092.891Cebus_capucinus
ENSGALG00000006179RPL1310093.365ENSCATG00000042426RPL1310093.365Cercocebus_atys
ENSGALG00000006179RPL139967.619ENSCATG00000038806-9667.619Cercocebus_atys
ENSGALG00000006179RPL1310093.365ENSCLAG00000003801RPL1310093.365Chinchilla_lanigera
ENSGALG00000006179RPL1310092.417ENSCSAG00000000476-10092.417Chlorocebus_sabaeus
ENSGALG00000006179RPL1310096.209ENSCPBG00000013618RPL1310096.209Chrysemys_picta_bellii
ENSGALG00000006179RPL139766.667ENSCING00000002582-9266.667Ciona_intestinalis
ENSGALG00000006179RPL139763.725ENSCSAVG00000007075-9867.143Ciona_savignyi
ENSGALG00000006179RPL137392.254ENSCANG00000028258RPL137792.254Colobus_angolensis_palliatus
ENSGALG00000006179RPL1310092.417ENSCGRG00001022563Rpl1310092.417Cricetulus_griseus_chok1gshd
ENSGALG00000006179RPL1310076.303ENSCGRG00001023328-10076.303Cricetulus_griseus_chok1gshd
ENSGALG00000006179RPL139369.543ENSCGRG00001008381-10069.543Cricetulus_griseus_chok1gshd
ENSGALG00000006179RPL1310091.943ENSCGRG00000014556Rpl1310091.943Cricetulus_griseus_crigri
ENSGALG00000006179RPL138571.667ENSCGRG00000016503-10071.667Cricetulus_griseus_crigri
ENSGALG00000006179RPL1310088.626ENSCSEG00000008346rpl1310088.626Cynoglossus_semilaevis
ENSGALG00000006179RPL1310089.100ENSCVAG00000019742rpl1310089.100Cyprinodon_variegatus
ENSGALG00000006179RPL1310087.204ENSDARG00000099380rpl1310087.204Danio_rerio
ENSGALG00000006179RPL1310092.891ENSDNOG00000034247RPL1310092.891Dasypus_novemcinctus
ENSGALG00000006179RPL138890.588ENSDORG00000028330Rpl1310090.588Dipodomys_ordii
ENSGALG00000006179RPL139562.621FBgn0011272RpL139362.621Drosophila_melanogaster
ENSGALG00000006179RPL139878.571ENSETEG00000015057-9878.571Echinops_telfairi
ENSGALG00000006179RPL139062.434ENSETEG00000004518-10062.963Echinops_telfairi
ENSGALG00000006179RPL1310067.299ENSEBUG00000000730rpl139967.299Eptatretus_burgeri
ENSGALG00000006179RPL139957.143ENSEEUG00000006113-9956.667Erinaceus_europaeus
ENSGALG00000006179RPL136690.714ENSEEUG00000011190-10090.714Erinaceus_europaeus
ENSGALG00000006179RPL1310084.360ENSELUG00000014509rpl1310084.360Esox_lucius
ENSGALG00000006179RPL138762.366ENSFCAG00000029961-9358.824Felis_catus
ENSGALG00000006179RPL1310091.469ENSFCAG00000003338RPL1310091.469Felis_catus
ENSGALG00000006179RPL1310095.735ENSFALG00000003173RPL1310095.735Ficedula_albicollis
ENSGALG00000006179RPL1310093.365ENSFDAG00000011310RPL1310093.365Fukomys_damarensis
ENSGALG00000006179RPL1310089.573ENSFHEG00000006122rpl1310089.573Fundulus_heteroclitus
ENSGALG00000006179RPL1310082.938ENSGMOG00000002752rpl1310081.517Gadus_morhua
ENSGALG00000006179RPL1310081.043ENSGAFG00000017260rpl1310081.043Gambusia_affinis
ENSGALG00000006179RPL1310083.412ENSGACG00000015752rpl1310083.412Gasterosteus_aculeatus
ENSGALG00000006179RPL1310095.735ENSGAGG00000003371RPL1310095.735Gopherus_agassizii
ENSGALG00000006179RPL1310072.986ENSGGOG00000026762-10072.986Gorilla_gorilla
ENSGALG00000006179RPL139192.045ENSGGOG00000025427RPL1310092.045Gorilla_gorilla
ENSGALG00000006179RPL1310089.100ENSHBUG00000013579rpl1310089.100Haplochromis_burtoni
ENSGALG00000006179RPL1310092.891ENSHGLG00000010880RPL1310092.891Heterocephalus_glaber_female
ENSGALG00000006179RPL1310092.891ENSHGLG00100018449RPL1310092.891Heterocephalus_glaber_male
ENSGALG00000006179RPL1310086.730ENSHCOG00000002997rpl1310086.730Hippocampus_comes
ENSGALG00000006179RPL1310086.256ENSIPUG00000009775rpl1310086.256Ictalurus_punctatus
ENSGALG00000006179RPL1310090.995ENSSTOG00000011963RPL1310089.573Ictidomys_tridecemlineatus
ENSGALG00000006179RPL1310092.417ENSJJAG00000014012Rpl1310092.417Jaculus_jaculus
ENSGALG00000006179RPL1310077.251ENSJJAG00000000236-10077.251Jaculus_jaculus
ENSGALG00000006179RPL1310088.626ENSKMAG00000006540rpl1310088.626Kryptolebias_marmoratus
ENSGALG00000006179RPL1310088.152ENSLBEG00000026455rpl1310088.152Labrus_bergylta
ENSGALG00000006179RPL139167.978ENSLACG00000000752-9267.978Latimeria_chalumnae
ENSGALG00000006179RPL139167.416ENSLACG00000004644-10067.416Latimeria_chalumnae
ENSGALG00000006179RPL138974.432ENSLACG00000002299-9469.036Latimeria_chalumnae
ENSGALG00000006179RPL136569.048ENSLACG00000001306-9569.048Latimeria_chalumnae
ENSGALG00000006179RPL136180.672ENSLACG00000005311-10080.672Latimeria_chalumnae
ENSGALG00000006179RPL136581.102ENSLACG00000014843-9481.102Latimeria_chalumnae
ENSGALG00000006179RPL1310089.100ENSLACG00000013768rpl1310089.100Latimeria_chalumnae
ENSGALG00000006179RPL1310087.678ENSLOCG00000004063rpl1310087.678Lepisosteus_oculatus
ENSGALG00000006179RPL1310091.943ENSLAFG00000004054RPL1310091.943Loxodonta_africana
ENSGALG00000006179RPL1310092.891ENSMFAG00000027717-10092.891Macaca_fascicularis
ENSGALG00000006179RPL1310066.825ENSMFAG00000046109-9766.825Macaca_fascicularis
ENSGALG00000006179RPL139966.190ENSMMUG00000038060-9666.190Macaca_mulatta
ENSGALG00000006179RPL1310092.891ENSMMUG00000017928RPL1310092.891Macaca_mulatta
ENSGALG00000006179RPL139967.143ENSMNEG00000030483-9667.143Macaca_nemestrina
ENSGALG00000006179RPL139071.023ENSMNEG00000033097-8971.023Macaca_nemestrina
ENSGALG00000006179RPL139968.571ENSMLEG00000033776-9668.571Mandrillus_leucophaeus
ENSGALG00000006179RPL1310072.038ENSMLEG00000036728-10072.038Mandrillus_leucophaeus
ENSGALG00000006179RPL1310089.100ENSMAMG00000021552rpl1310089.100Mastacembelus_armatus
ENSGALG00000006179RPL1310089.573ENSMZEG00005014343rpl1310089.573Maylandia_zebra
ENSGALG00000006179RPL139199.435ENSMGAG00000008027RPL1310099.435Meleagris_gallopavo
ENSGALG00000006179RPL137592.453ENSMAUG00000020543-10092.453Mesocricetus_auratus
ENSGALG00000006179RPL1310087.204ENSMAUG00000016802-10087.204Mesocricetus_auratus
ENSGALG00000006179RPL137288.235ENSMICG00000027620-8888.235Microcebus_murinus
ENSGALG00000006179RPL1310092.417ENSMICG00000043954-10092.417Microcebus_murinus
ENSGALG00000006179RPL1310081.517ENSMOCG00000016985-10081.043Microtus_ochrogaster
ENSGALG00000006179RPL1310074.882ENSMOCG00000011602-10074.882Microtus_ochrogaster
ENSGALG00000006179RPL1310082.938ENSMOCG00000021875-10080.374Microtus_ochrogaster
ENSGALG00000006179RPL1310092.891ENSMOCG00000009058-10092.891Microtus_ochrogaster
ENSGALG00000006179RPL1310091.469ENSMOCG00000002216-10091.469Microtus_ochrogaster
ENSGALG00000006179RPL1310089.100ENSMMOG00000016577rpl1310089.100Mola_mola
ENSGALG00000006179RPL1310093.839ENSMODG00000003663RPL1310093.839Monodelphis_domestica
ENSGALG00000006179RPL1310088.152ENSMALG00000020934rpl1310088.152Monopterus_albus
ENSGALG00000006179RPL1310092.417MGP_CAROLIEiJ_G0031676Rpl1310092.417Mus_caroli
ENSGALG00000006179RPL1310092.417ENSMUSG00000000740Rpl1310092.417Mus_musculus
ENSGALG00000006179RPL1310092.417MGP_PahariEiJ_G0023274Rpl1310092.417Mus_pahari
ENSGALG00000006179RPL137282.090MGP_PahariEiJ_G0022842-10082.090Mus_pahari
ENSGALG00000006179RPL1310092.891MGP_SPRETEiJ_G0032794Rpl1310092.891Mus_spretus
ENSGALG00000006179RPL139487.437MGP_SPRETEiJ_G0031839-7887.437Mus_spretus
ENSGALG00000006179RPL139953.110ENSMPUG00000001481-9651.675Mustela_putorius_furo
ENSGALG00000006179RPL1310093.365ENSMLUG00000010950RPL139493.365Myotis_lucifugus
ENSGALG00000006179RPL139162.712ENSNGAG00000012072-9862.712Nannospalax_galili
ENSGALG00000006179RPL138771.351ENSNGAG00000014655-9571.351Nannospalax_galili
ENSGALG00000006179RPL1310091.943ENSNGAG00000018467Rpl1310091.943Nannospalax_galili
ENSGALG00000006179RPL1310089.100ENSNBRG00000011031rpl1310089.100Neolamprologus_brichardi
ENSGALG00000006179RPL1310092.417ENSNLEG00000015774RPL1310092.417Nomascus_leucogenys
ENSGALG00000006179RPL1310073.585ENSNLEG00000028759-10074.057Nomascus_leucogenys
ENSGALG00000006179RPL1310090.521ENSODEG00000020384-10090.521Octodon_degus
ENSGALG00000006179RPL1310089.573ENSODEG00000019915-10089.573Octodon_degus
ENSGALG00000006179RPL1310086.730ENSODEG00000019351-10086.730Octodon_degus
ENSGALG00000006179RPL1310092.417ENSODEG00000004235-10092.417Octodon_degus
ENSGALG00000006179RPL1310092.417ENSODEG00000019458-10092.417Octodon_degus
ENSGALG00000006179RPL1310090.521ENSODEG00000019297-10090.521Octodon_degus
ENSGALG00000006179RPL1310089.100ENSONIG00000005934rpl1310089.100Oreochromis_niloticus
ENSGALG00000006179RPL1310092.891ENSOANG00000006729RPL1310092.891Ornithorhynchus_anatinus
ENSGALG00000006179RPL1310088.152ENSOCUG00000022399-10088.626Oryctolagus_cuniculus
ENSGALG00000006179RPL1310089.100ENSOCUG00000024415-10089.573Oryctolagus_cuniculus
ENSGALG00000006179RPL1310086.730ENSOCUG00000007536-10086.256Oryctolagus_cuniculus
ENSGALG00000006179RPL1310089.157ENSORLG00000007654rpl1310089.100Oryzias_latipes
ENSGALG00000006179RPL1310089.100ENSORLG00020009960rpl1310089.100Oryzias_latipes_hni
ENSGALG00000006179RPL1310089.100ENSORLG00015008108rpl1310089.100Oryzias_latipes_hsok
ENSGALG00000006179RPL1310089.573ENSOMEG00000001728rpl1310089.573Oryzias_melastigma
ENSGALG00000006179RPL1310093.365ENSOGAG00000026444RPL1310093.365Otolemur_garnettii
ENSGALG00000006179RPL1310084.360ENSOARG00000003957-7184.360Ovis_aries
ENSGALG00000006179RPL135266.337ENSOARG00000011291-6166.337Ovis_aries
ENSGALG00000006179RPL139092.000ENSPPAG00000029415-10092.000Pan_paniscus
ENSGALG00000006179RPL139987.619ENSPPAG00000042590-9687.619Pan_paniscus
ENSGALG00000006179RPL1310072.512ENSPPAG00000041631-10072.512Pan_paniscus
ENSGALG00000006179RPL138463.128ENSPPRG00000006057-8659.444Panthera_pardus
ENSGALG00000006179RPL1310091.469ENSPPRG00000003949RPL1310091.469Panthera_pardus
ENSGALG00000006179RPL138463.128ENSPTIG00000014719-8659.444Panthera_tigris_altaica
ENSGALG00000006179RPL136689.062ENSPTIG00000010985RPL138489.062Panthera_tigris_altaica
ENSGALG00000006179RPL1310072.038ENSPTRG00000047911-10072.038Pan_troglodytes
ENSGALG00000006179RPL1310087.678ENSPTRG00000041770-10087.678Pan_troglodytes
ENSGALG00000006179RPL1310092.891ENSPTRG00000008480RPL1310092.891Pan_troglodytes
ENSGALG00000006179RPL1310093.365ENSPANG00000031667RPL1310093.365Papio_anubis
ENSGALG00000006179RPL1310088.626ENSPKIG00000001789rpl1310088.626Paramormyrops_kingsleyae
ENSGALG00000006179RPL1310095.261ENSPSIG00000015634RPL1310095.261Pelodiscus_sinensis
ENSGALG00000006179RPL1310088.152ENSPMGG00000006067rpl1310088.152Periophthalmus_magnuspinnatus
ENSGALG00000006179RPL1310092.417ENSPEMG00000010342Rpl1310092.417Peromyscus_maniculatus_bairdii
ENSGALG00000006179RPL1310089.100ENSPFOG00000013435rpl1310089.100Poecilia_formosa
ENSGALG00000006179RPL1310089.100ENSPLAG00000004085rpl1310089.100Poecilia_latipinna
ENSGALG00000006179RPL1310089.100ENSPMEG00000015599rpl1310089.100Poecilia_mexicana
ENSGALG00000006179RPL1310088.626ENSPREG00000023190rpl1310088.626Poecilia_reticulata
ENSGALG00000006179RPL1310091.943ENSPCAG00000015461RPL1310091.943Procavia_capensis
ENSGALG00000006179RPL1310093.365ENSPCOG00000024647RPL1310093.365Propithecus_coquereli
ENSGALG00000006179RPL1310090.521ENSPVAG00000015130RPL1310090.521Pteropus_vampyrus
ENSGALG00000006179RPL1310089.100ENSPNYG00000013189rpl1310089.100Pundamilia_nyererei
ENSGALG00000006179RPL1310088.152ENSPNAG00000002916rpl1310088.152Pygocentrus_nattereri
ENSGALG00000006179RPL1310090.995ENSRNOG00000055911LOC10036125910090.995Rattus_norvegicus
ENSGALG00000006179RPL139986.190ENSRNOG00000059545AC114446.110083.962Rattus_norvegicus
ENSGALG00000006179RPL1310086.730ENSRNOG00000029227AABR07054469.110086.730Rattus_norvegicus
ENSGALG00000006179RPL1310091.943ENSRNOG00000015335Rpl1310091.943Rattus_norvegicus
ENSGALG00000006179RPL1310090.521ENSRNOG00000061438LOC10036049110090.521Rattus_norvegicus
ENSGALG00000006179RPL139968.095ENSRBIG00000010434-8968.095Rhinopithecus_bieti
ENSGALG00000006179RPL1310093.365ENSRBIG00000031937RPL1310093.365Rhinopithecus_bieti
ENSGALG00000006179RPL1310093.365ENSRROG00000036999-10093.365Rhinopithecus_roxellana
ENSGALG00000006179RPL139968.095ENSRROG00000025626-8968.095Rhinopithecus_roxellana
ENSGALG00000006179RPL139246.907YDL082WRPL13A10048.341Saccharomyces_cerevisiae
ENSGALG00000006179RPL139247.423YMR142CRPL13B10048.815Saccharomyces_cerevisiae
ENSGALG00000006179RPL1310092.891ENSSBOG00000028589-10092.891Saimiri_boliviensis_boliviensis
ENSGALG00000006179RPL1310072.512ENSSBOG00000019618-10072.512Saimiri_boliviensis_boliviensis
ENSGALG00000006179RPL138258.721ENSSHAG00000010433-10058.721Sarcophilus_harrisii
ENSGALG00000006179RPL1310089.100ENSSFOG00015019594rpl1310089.100Scleropages_formosus
ENSGALG00000006179RPL1310086.256ENSSMAG00000021443rpl1310086.256Scophthalmus_maximus
ENSGALG00000006179RPL1310090.521ENSSDUG00000001262rpl1310090.521Seriola_dumerili
ENSGALG00000006179RPL139650.952ENSSLDG00000007067-9451.196Seriola_lalandi_dorsalis
ENSGALG00000006179RPL1310090.521ENSSLDG00000021182rpl1310090.521Seriola_lalandi_dorsalis
ENSGALG00000006179RPL137691.250ENSSPUG00000006904RPL138991.250Sphenodon_punctatus
ENSGALG00000006179RPL1310090.521ENSSPAG00000020434rpl1310090.521Stegastes_partitus
ENSGALG00000006179RPL139961.722ENSSSCG00000033294-9961.836Sus_scrofa
ENSGALG00000006179RPL1310091.943ENSSSCG00000024974RPL1310091.943Sus_scrofa
ENSGALG00000006179RPL139967.619ENSSSCG00000003723-9967.619Sus_scrofa
ENSGALG00000006179RPL139956.398ENSSSCG00000029020-9656.398Sus_scrofa
ENSGALG00000006179RPL139964.423ENSSSCG00000007813-9964.423Sus_scrofa
ENSGALG00000006179RPL1310065.877ENSSSCG00000036198-10065.877Sus_scrofa
ENSGALG00000006179RPL1310093.839ENSTGUG00000007874RPL1310093.839Taeniopygia_guttata
ENSGALG00000006179RPL1310088.152ENSTRUG00000021170rpl1310088.152Takifugu_rubripes
ENSGALG00000006179RPL1310090.047ENSTNIG00000009349rpl1310090.047Tetraodon_nigroviridis
ENSGALG00000006179RPL1310091.943ENSTTRG00000004374RPL1310091.943Tursiops_truncatus
ENSGALG00000006179RPL1310092.891ENSUAMG00000020363RPL1310092.891Ursus_americanus
ENSGALG00000006179RPL136583.333ENSVPAG00000000569-10083.333Vicugna_pacos
ENSGALG00000006179RPL1310085.782ENSVVUG00000003839-10085.782Vulpes_vulpes
ENSGALG00000006179RPL139455.122ENSVVUG00000005779-9252.857Vulpes_vulpes
ENSGALG00000006179RPL1310087.204ENSXETG00000019835rpl1310087.204Xenopus_tropicalis
ENSGALG00000006179RPL1310088.626ENSXCOG00000011315rpl1310088.626Xiphophorus_couchianus
ENSGALG00000006179RPL1310089.100ENSXMAG00000003221rpl1310089.100Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003735structural constituent of ribosome-IEAFunction
GO:0005730nucleolus-IEAComponent
GO:0005783endoplasmic reticulum-IEAComponent
GO:0006412translation-IEAProcess
GO:0022625cytosolic large ribosomal subunit21873635.IBAComponent

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