EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000006760 (Gene tree)
Gene ID: 422258
Gene Symbol: CSTF2
Alias: -
Full Name: Gallus gallus cleavage stimulation factor subunit 2 (CSTF2)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 6559 bases
Position: chr4:5151806-5158364
Accession: NM_001006433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000010910	RRM_1	PF00076.22	1.2e-25	1	1
ENSGALP00000072327	RRM_1	PF00076.22	1.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000102612	-	1918	XM_015278275	ENSGALP00000072327	573 (aa)	XP_015133761	UPI0000447FE1
ENSGALT00000010924	-	1619	-	ENSGALP00000010910	475 (aa)	-	Q5ZLS0

Gene Model

Click here to download ENSGALG00000006760's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000006760's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000006760	CSTF2	100	85.667	ENSG00000101811	CSTF2	100	79.181	Homo_sapiens
ENSGALG00000006760	CSTF2	99	62.176	ENSAPOG00000005630	cstf2	97	61.290	Acanthochromis_polyacanthus
ENSGALG00000006760	CSTF2	100	84.333	ENSAMEG00000002082	CSTF2	100	76.020	Ailuropoda_melanoleuca
ENSGALG00000006760	CSTF2	89	83.806	ENSACIG00000012852	cstf2	97	59.622	Amphilophus_citrinellus
ENSGALG00000006760	CSTF2	99	61.658	ENSAOCG00000020905	cstf2	97	60.513	Amphiprion_ocellaris
ENSGALG00000006760	CSTF2	87	84.615	ENSAPEG00000006526	cstf2	97	60.855	Amphiprion_percula
ENSGALG00000006760	CSTF2	87	84.553	ENSATEG00000018186	cstf2	97	59.924	Anabas_testudineus
ENSGALG00000006760	CSTF2	96	98.227	ENSAPLG00000007255	CSTF2	98	92.334	Anas_platyrhynchos
ENSGALG00000006760	CSTF2	100	84.667	ENSANAG00000022342	CSTF2	100	78.498	Aotus_nancymaae
ENSGALG00000006760	CSTF2	99	61.458	ENSACLG00000000779	cstf2	94	61.272	Astatotilapia_calliptera
ENSGALG00000006760	CSTF2	80	95.161	ENSAMXG00000021477	cstf2	98	91.304	Astyanax_mexicanus
ENSGALG00000006760	CSTF2	100	79.174	ENSBTAG00000003547	CSTF2	100	78.830	Bos_taurus
ENSGALG00000006760	CSTF2	100	84.667	ENSCJAG00000004422	CSTF2	100	79.622	Callithrix_jacchus
ENSGALG00000006760	CSTF2	100	79.522	ENSCAFG00000017551	CSTF2	100	79.181	Canis_familiaris
ENSGALG00000006760	CSTF2	100	83.667	ENSCAFG00020007619	CSTF2	100	76.568	Canis_lupus_dingo
ENSGALG00000006760	CSTF2	100	79.174	ENSCHIG00000016994	CSTF2	100	78.830	Capra_hircus
ENSGALG00000006760	CSTF2	100	79.522	ENSTSYG00000006529	CSTF2	100	79.352	Carlito_syrichta
ENSGALG00000006760	CSTF2	100	86.000	ENSCPOG00000015255	CSTF2	89	90.798	Cavia_porcellus
ENSGALG00000006760	CSTF2	100	84.667	ENSCCAG00000032975	CSTF2	100	78.498	Cebus_capucinus
ENSGALG00000006760	CSTF2	100	85.000	ENSCATG00000022835	CSTF2	100	79.002	Cercocebus_atys
ENSGALG00000006760	CSTF2	100	85.333	ENSCLAG00000001904	CSTF2	87	91.875	Chinchilla_lanigera
ENSGALG00000006760	CSTF2	100	85.000	ENSCSAG00000010360	CSTF2	100	76.238	Chlorocebus_sabaeus
ENSGALG00000006760	CSTF2	53	96.226	ENSCHOG00000012803	CSTF2	63	96.226	Choloepus_hoffmanni
ENSGALG00000006760	CSTF2	99	95.333	ENSCPBG00000014293	CSTF2	100	85.417	Chrysemys_picta_bellii
ENSGALG00000006760	CSTF2	100	85.000	ENSCANG00000030612	CSTF2	100	79.002	Colobus_angolensis_palliatus
ENSGALG00000006760	CSTF2	100	78.268	ENSCGRG00001023023	Cstf2	100	77.080	Cricetulus_griseus_chok1gshd
ENSGALG00000006760	CSTF2	100	77.911	ENSCGRG00000003897	Cstf2	100	76.712	Cricetulus_griseus_crigri
ENSGALG00000006760	CSTF2	87	85.366	ENSCVAG00000005731	cstf2	97	62.543	Cyprinodon_variegatus
ENSGALG00000006760	CSTF2	70	98.182	ENSDARG00000090788	cstf2	96	92.188	Danio_rerio
ENSGALG00000006760	CSTF2	100	78.216	ENSDORG00000007195	Cstf2	89	91.975	Dipodomys_ordii
ENSGALG00000006760	CSTF2	79	89.189	ENSETEG00000004931	CSTF2	67	92.537	Echinops_telfairi
ENSGALG00000006760	CSTF2	100	84.000	ENSEASG00005001216	CSTF2	100	76.568	Equus_asinus_asinus
ENSGALG00000006760	CSTF2	100	84.000	ENSECAG00000009325	CSTF2	100	79.181	Equus_caballus
ENSGALG00000006760	CSTF2	100	83.667	ENSFCAG00000007000	CSTF2	100	79.181	Felis_catus
ENSGALG00000006760	CSTF2	91	97.665	ENSFALG00000003859	CSTF2	100	90.780	Ficedula_albicollis
ENSGALG00000006760	CSTF2	100	85.667	ENSFDAG00000002416	CSTF2	100	79.010	Fukomys_damarensis
ENSGALG00000006760	CSTF2	87	85.366	ENSFHEG00000017065	cstf2	94	59.799	Fundulus_heteroclitus
ENSGALG00000006760	CSTF2	99	60.000	ENSGMOG00000005145	cstf2	99	58.763	Gadus_morhua
ENSGALG00000006760	CSTF2	88	82.213	ENSGAFG00000020027	cstf2	97	60.136	Gambusia_affinis
ENSGALG00000006760	CSTF2	99	58.319	ENSGACG00000017326	cstf2	94	83.673	Gasterosteus_aculeatus
ENSGALG00000006760	CSTF2	100	88.449	ENSGAGG00000006037	CSTF2	100	88.284	Gopherus_agassizii
ENSGALG00000006760	CSTF2	100	85.667	ENSGGOG00000022267	CSTF2	100	79.346	Gorilla_gorilla
ENSGALG00000006760	CSTF2	99	62.153	ENSHBUG00000016183	cstf2	94	62.209	Haplochromis_burtoni
ENSGALG00000006760	CSTF2	100	69.550	ENSHGLG00000013455	-	100	69.204	Heterocephalus_glaber_female
ENSGALG00000006760	CSTF2	100	79.010	ENSHGLG00000000659	-	100	78.840	Heterocephalus_glaber_female
ENSGALG00000006760	CSTF2	100	79.010	ENSHGLG00100001130	-	100	78.840	Heterocephalus_glaber_male
ENSGALG00000006760	CSTF2	100	69.550	ENSHGLG00100015391	-	100	69.204	Heterocephalus_glaber_male
ENSGALG00000006760	CSTF2	99	62.955	ENSHCOG00000005157	cstf2	98	61.315	Hippocampus_comes
ENSGALG00000006760	CSTF2	100	62.500	ENSIPUG00000017839	cstf2	99	62.355	Ictalurus_punctatus
ENSGALG00000006760	CSTF2	100	79.181	ENSSTOG00000023445	CSTF2	87	91.824	Ictidomys_tridecemlineatus
ENSGALG00000006760	CSTF2	100	78.840	ENSJJAG00000020507	Cstf2	87	91.824	Jaculus_jaculus
ENSGALG00000006760	CSTF2	52	85.020	ENSKMAG00000001068	cstf2	97	63.189	Kryptolebias_marmoratus
ENSGALG00000006760	CSTF2	63	94.915	ENSLBEG00000028720	cstf2	93	89.062	Labrus_bergylta
ENSGALG00000006760	CSTF2	99	80.132	ENSLACG00000015927	CSTF2	99	66.720	Latimeria_chalumnae
ENSGALG00000006760	CSTF2	99	67.530	ENSLOCG00000015300	cstf2	94	66.099	Lepisosteus_oculatus
ENSGALG00000006760	CSTF2	100	84.333	ENSLAFG00000000474	CSTF2	100	79.352	Loxodonta_africana
ENSGALG00000006760	CSTF2	100	85.000	ENSMFAG00000043888	CSTF2	100	79.002	Macaca_fascicularis
ENSGALG00000006760	CSTF2	100	76.744	ENSMMUG00000013008	CSTF2	99	77.933	Macaca_mulatta
ENSGALG00000006760	CSTF2	100	85.000	ENSMNEG00000041824	CSTF2	100	78.840	Macaca_nemestrina
ENSGALG00000006760	CSTF2	100	85.000	ENSMLEG00000036870	CSTF2	100	79.002	Mandrillus_leucophaeus
ENSGALG00000006760	CSTF2	97	60.924	ENSMAMG00000020364	cstf2	96	59.894	Mastacembelus_armatus
ENSGALG00000006760	CSTF2	99	61.458	ENSMZEG00005007200	cstf2	97	61.272	Maylandia_zebra
ENSGALG00000006760	CSTF2	91	98.780	ENSMGAG00000004139	CSTF2	100	98.372	Meleagris_gallopavo
ENSGALG00000006760	CSTF2	100	78.438	ENSMAUG00000000965	Cstf2	100	78.098	Mesocricetus_auratus
ENSGALG00000006760	CSTF2	100	86.667	ENSMICG00000014121	CSTF2	100	80.551	Microcebus_murinus
ENSGALG00000006760	CSTF2	100	79.281	ENSMOCG00000008081	Cstf2	100	79.281	Microtus_ochrogaster
ENSGALG00000006760	CSTF2	82	93.970	ENSMMOG00000000538	cstf2	97	55.078	Mola_mola
ENSGALG00000006760	CSTF2	100	84.667	ENSMODG00000011785	CSTF2	100	77.318	Monodelphis_domestica
ENSGALG00000006760	CSTF2	99	84.333	MGP_CAROLIEiJ_G0033383	Cstf2	87	91.875	Mus_caroli
ENSGALG00000006760	CSTF2	100	78.438	ENSMUSG00000031256	Cstf2	87	91.875	Mus_musculus
ENSGALG00000006760	CSTF2	99	84.333	MGP_PahariEiJ_G0031923	Cstf2	100	78.231	Mus_pahari
ENSGALG00000006760	CSTF2	99	84.000	MGP_SPRETEiJ_G0034548	Cstf2	87	91.875	Mus_spretus
ENSGALG00000006760	CSTF2	100	84.000	ENSMPUG00000002339	CSTF2	100	72.613	Mustela_putorius_furo
ENSGALG00000006760	CSTF2	100	83.333	ENSMLUG00000004598	CSTF2	98	72.884	Myotis_lucifugus
ENSGALG00000006760	CSTF2	100	79.082	ENSNGAG00000021985	Cstf2	100	78.912	Nannospalax_galili
ENSGALG00000006760	CSTF2	96	56.295	ENSNBRG00000021694	cstf2	100	57.085	Neolamprologus_brichardi
ENSGALG00000006760	CSTF2	100	85.333	ENSNLEG00000007510	CSTF2	100	79.174	Nomascus_leucogenys
ENSGALG00000006760	CSTF2	100	80.862	ENSMEUG00000011186	-	100	81.207	Notamacropus_eugenii
ENSGALG00000006760	CSTF2	100	77.759	ENSMEUG00000007875	-	100	78.103	Notamacropus_eugenii
ENSGALG00000006760	CSTF2	91	78.261	ENSMEUG00000014025	-	100	78.639	Notamacropus_eugenii
ENSGALG00000006760	CSTF2	86	75.688	ENSOPRG00000003106	CSTF2	85	76.923	Ochotona_princeps
ENSGALG00000006760	CSTF2	100	78.498	ENSODEG00000002059	CSTF2	100	78.498	Octodon_degus
ENSGALG00000006760	CSTF2	83	84.739	ENSONIG00000002631	cstf2	99	56.719	Oreochromis_niloticus
ENSGALG00000006760	CSTF2	97	100.000	ENSOANG00000004208	CSTF2	87	96.923	Ornithorhynchus_anatinus
ENSGALG00000006760	CSTF2	100	79.181	ENSOCUG00000010468	CSTF2	100	79.352	Oryctolagus_cuniculus
ENSGALG00000006760	CSTF2	86	83.806	ENSORLG00000001380	cstf2	97	59.898	Oryzias_latipes
ENSGALG00000006760	CSTF2	99	61.257	ENSORLG00020021917	cstf2	97	60.374	Oryzias_latipes_hni
ENSGALG00000006760	CSTF2	99	61.257	ENSORLG00015011996	cstf2	97	59.898	Oryzias_latipes_hsok
ENSGALG00000006760	CSTF2	99	63.130	ENSOMEG00000015507	cstf2	97	61.724	Oryzias_melastigma
ENSGALG00000006760	CSTF2	100	84.667	ENSOGAG00000011192	CSTF2	100	72.727	Otolemur_garnettii
ENSGALG00000006760	CSTF2	100	83.000	ENSOARG00000001022	CSTF2	100	78.830	Ovis_aries
ENSGALG00000006760	CSTF2	100	85.667	ENSPPAG00000031804	CSTF2	100	79.346	Pan_paniscus
ENSGALG00000006760	CSTF2	100	83.667	ENSPPRG00000022492	CSTF2	100	79.181	Panthera_pardus
ENSGALG00000006760	CSTF2	100	83.000	ENSPTIG00000009922	CSTF2	100	78.840	Panthera_tigris_altaica
ENSGALG00000006760	CSTF2	100	85.667	ENSPTRG00000022090	CSTF2	100	79.346	Pan_troglodytes
ENSGALG00000006760	CSTF2	100	85.000	ENSPANG00000002303	CSTF2	100	79.002	Papio_anubis
ENSGALG00000006760	CSTF2	99	63.826	ENSPKIG00000005033	cstf2	97	60.900	Paramormyrops_kingsleyae
ENSGALG00000006760	CSTF2	99	63.294	ENSPMGG00000006534	cstf2	97	61.340	Periophthalmus_magnuspinnatus
ENSGALG00000006760	CSTF2	100	77.929	ENSPEMG00000019415	Cstf2	100	77.104	Peromyscus_maniculatus_bairdii
ENSGALG00000006760	CSTF2	100	85.667	ENSPCIG00000002989	CSTF2	100	77.924	Phascolarctos_cinereus
ENSGALG00000006760	CSTF2	99	56.303	ENSPLAG00000011176	cstf2	97	58.638	Poecilia_latipinna
ENSGALG00000006760	CSTF2	88	82.609	ENSPMEG00000017743	cstf2	97	58.638	Poecilia_mexicana
ENSGALG00000006760	CSTF2	86	82.609	ENSPREG00000011481	cstf2	97	59.076	Poecilia_reticulata
ENSGALG00000006760	CSTF2	100	85.333	ENSPPYG00000020541	CSTF2	100	76.403	Pongo_abelii
ENSGALG00000006760	CSTF2	100	85.667	ENSPCOG00000027744	CSTF2	100	80.207	Propithecus_coquereli
ENSGALG00000006760	CSTF2	97	65.194	ENSPVAG00000008342	CSTF2	100	64.841	Pteropus_vampyrus
ENSGALG00000006760	CSTF2	56	91.781	ENSPNYG00000010852	cstf2	96	87.179	Pundamilia_nyererei
ENSGALG00000006760	CSTF2	99	63.241	ENSPNAG00000018887	cstf2	99	62.912	Pygocentrus_nattereri
ENSGALG00000006760	CSTF2	100	78.596	ENSRNOG00000048025	Cstf2	100	78.253	Rattus_norvegicus
ENSGALG00000006760	CSTF2	100	78.141	ENSRBIG00000030745	CSTF2	100	77.797	Rhinopithecus_bieti
ENSGALG00000006760	CSTF2	100	85.000	ENSRROG00000045042	CSTF2	100	79.002	Rhinopithecus_roxellana
ENSGALG00000006760	CSTF2	100	84.667	ENSSBOG00000021649	CSTF2	100	78.328	Saimiri_boliviensis_boliviensis
ENSGALG00000006760	CSTF2	96	84.698	ENSSHAG00000003681	CSTF2	86	94.030	Sarcophilus_harrisii
ENSGALG00000006760	CSTF2	99	62.543	ENSSFOG00015006348	cstf2	97	64.236	Scleropages_formosus
ENSGALG00000006760	CSTF2	98	61.014	ENSSMAG00000013463	cstf2	97	61.390	Scophthalmus_maximus
ENSGALG00000006760	CSTF2	100	83.054	ENSSPUG00000005288	-	98	88.323	Sphenodon_punctatus
ENSGALG00000006760	CSTF2	100	79.579	ENSSSCG00000012486	CSTF2	100	79.158	Sus_scrofa
ENSGALG00000006760	CSTF2	100	95.400	ENSTGUG00000002253	CSTF2	100	95.400	Taeniopygia_guttata
ENSGALG00000006760	CSTF2	99	61.856	ENSTNIG00000016860	cstf2	99	60.642	Tetraodon_nigroviridis
ENSGALG00000006760	CSTF2	53	100.000	ENSTBEG00000010029	-	59	100.000	Tupaia_belangeri
ENSGALG00000006760	CSTF2	100	79.181	ENSTTRG00000013556	CSTF2	100	78.840	Tursiops_truncatus
ENSGALG00000006760	CSTF2	100	84.333	ENSUAMG00000026605	CSTF2	100	78.849	Ursus_americanus
ENSGALG00000006760	CSTF2	99	84.000	ENSUMAG00000012417	CSTF2	100	77.178	Ursus_maritimus
ENSGALG00000006760	CSTF2	83	80.831	ENSVPAG00000006466	CSTF2	70	82.997	Vicugna_pacos
ENSGALG00000006760	CSTF2	100	79.522	ENSVVUG00000004717	CSTF2	100	79.181	Vulpes_vulpes
ENSGALG00000006760	CSTF2	100	78.593	ENSXETG00000009642	cstf2	100	68.430	Xenopus_tropicalis
ENSGALG00000006760	CSTF2	64	96.970	ENSXCOG00000016436	cstf2	94	91.549	Xiphophorus_couchianus
ENSGALG00000006760	CSTF2	85	83.333	ENSXMAG00000013524	cstf2	97	60.204	Xiphophorus_maculatus