EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000007237 (Gene tree)
Gene ID: 769169
Gene Symbol: ALYREF
Alias: THOC4
Full Name: Gallus gallus Aly/REF export factor (ALYREF)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 4796 bases
Position: chr18:9938407-9943202
Accession: NM_001277907
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000011696	RRM_1	PF00076.22	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000011710	-	1088	-	ENSGALP00000011696	255 (aa)	-	E1C2L5

Gene Model

Click here to download ENSGALG00000007237's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03013	RNA transport	KEGG
gga03015	mRNA surveillance pathway	KEGG
gga03040	Spliceosome	KEGG
gga05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000007237's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000007237	ALYREF	100	83.398	ENSG00000183684	ALYREF	97	83.784	Homo_sapiens
ENSGALG00000007237	ALYREF	100	70.438	ENSAPOG00000018455	ALYREF	100	73.358	Acanthochromis_polyacanthus
ENSGALG00000007237	ALYREF	80	84.038	ENSAMEG00000017463	ALYREF	74	93.478	Ailuropoda_melanoleuca
ENSGALG00000007237	ALYREF	100	77.132	ENSACAG00000010526	ALYREF	100	75.581	Anolis_carolinensis
ENSGALG00000007237	ALYREF	69	92.655	ENSANAG00000022638	-	87	83.415	Aotus_nancymaae
ENSGALG00000007237	ALYREF	100	74.517	ENSANAG00000028229	-	78	74.903	Aotus_nancymaae
ENSGALG00000007237	ALYREF	100	83.398	ENSBTAG00000008498	ALYREF	100	84.170	Bos_taurus
ENSGALG00000007237	ALYREF	100	82.625	ENSCJAG00000039942	ALYREF	97	83.398	Callithrix_jacchus
ENSGALG00000007237	ALYREF	100	83.398	ENSCAFG00000005877	ALYREF	100	84.170	Canis_familiaris
ENSGALG00000007237	ALYREF	100	83.398	ENSCAFG00020009815	ALYREF	100	84.170	Canis_lupus_dingo
ENSGALG00000007237	ALYREF	100	83.077	ENSCHIG00000017396	ALYREF	97	83.462	Capra_hircus
ENSGALG00000007237	ALYREF	78	85.859	ENSTSYG00000002272	ALYREF	69	93.714	Carlito_syrichta
ENSGALG00000007237	ALYREF	53	96.269	ENSCAPG00000014727	-	100	96.269	Cavia_aperea
ENSGALG00000007237	ALYREF	100	83.784	ENSCPOG00000013710	ALYREF	100	84.170	Cavia_porcellus
ENSGALG00000007237	ALYREF	100	70.196	ENSCCAG00000030237	-	100	71.765	Cebus_capucinus
ENSGALG00000007237	ALYREF	100	85.328	ENSCCAG00000020578	-	97	84.170	Cebus_capucinus
ENSGALG00000007237	ALYREF	100	83.784	ENSCATG00000033169	ALYREF	97	84.170	Cercocebus_atys
ENSGALG00000007237	ALYREF	100	79.608	ENSCLAG00000015026	ALYREF	100	79.608	Chinchilla_lanigera
ENSGALG00000007237	ALYREF	100	83.784	ENSCSAG00000002216	ALYREF	97	84.170	Chlorocebus_sabaeus
ENSGALG00000007237	ALYREF	71	91.713	ENSCANG00000034056	ALYREF	95	84.492	Colobus_angolensis_palliatus
ENSGALG00000007237	ALYREF	100	84.231	ENSCGRG00001018191	-	100	83.721	Cricetulus_griseus_chok1gshd
ENSGALG00000007237	ALYREF	75	89.474	ENSCGRG00000015871	-	94	82.564	Cricetulus_griseus_crigri
ENSGALG00000007237	ALYREF	72	57.292	ENSCSEG00000015438	-	98	56.771	Cynoglossus_semilaevis
ENSGALG00000007237	ALYREF	70	93.258	ENSDNOG00000002563	ALYREF	84	87.940	Dasypus_novemcinctus
ENSGALG00000007237	ALYREF	93	77.731	ENSDORG00000025849	-	73	93.296	Dipodomys_ordii
ENSGALG00000007237	ALYREF	70	93.820	ENSETEG00000016596	ALYREF	100	92.135	Echinops_telfairi
ENSGALG00000007237	ALYREF	100	83.398	ENSEASG00005005824	ALYREF	95	83.784	Equus_asinus_asinus
ENSGALG00000007237	ALYREF	100	83.398	ENSECAG00000018754	ALYREF	95	83.784	Equus_caballus
ENSGALG00000007237	ALYREF	67	79.310	ENSEEUG00000010164	ALYREF	100	80.460	Erinaceus_europaeus
ENSGALG00000007237	ALYREF	100	83.784	ENSFCAG00000022549	ALYREF	98	84.170	Felis_catus
ENSGALG00000007237	ALYREF	82	84.211	ENSFDAG00000001213	ALYREF	89	86.735	Fukomys_damarensis
ENSGALG00000007237	ALYREF	100	70.881	ENSGACG00000013328	ALYREF	100	71.756	Gasterosteus_aculeatus
ENSGALG00000007237	ALYREF	100	85.659	ENSGAGG00000008536	ALYREF	100	87.209	Gopherus_agassizii
ENSGALG00000007237	ALYREF	100	83.784	ENSGGOG00000013935	ALYREF	99	83.462	Gorilla_gorilla
ENSGALG00000007237	ALYREF	100	82.946	ENSHGLG00000008293	ALYREF	100	82.946	Heterocephalus_glaber_female
ENSGALG00000007237	ALYREF	81	78.509	ENSHGLG00100006949	ALYREF	94	79.638	Heterocephalus_glaber_male
ENSGALG00000007237	ALYREF	100	69.030	ENSHCOG00000015046	ALYREF	100	70.522	Hippocampus_comes
ENSGALG00000007237	ALYREF	100	81.749	ENSJJAG00000004134	-	100	82.239	Jaculus_jaculus
ENSGALG00000007237	ALYREF	100	73.462	ENSLACG00000005694	ALYREF	100	76.923	Latimeria_chalumnae
ENSGALG00000007237	ALYREF	74	93.085	ENSLAFG00000003083	ALYREF	100	94.149	Loxodonta_africana
ENSGALG00000007237	ALYREF	100	83.137	ENSMFAG00000001394	ALYREF	97	82.625	Macaca_fascicularis
ENSGALG00000007237	ALYREF	100	83.784	ENSMMUG00000012884	ALYREF	97	84.170	Macaca_mulatta
ENSGALG00000007237	ALYREF	100	83.784	ENSMNEG00000043666	ALYREF	97	84.170	Macaca_nemestrina
ENSGALG00000007237	ALYREF	73	85.263	ENSMLEG00000043353	ALYREF	87	84.211	Mandrillus_leucophaeus
ENSGALG00000007237	ALYREF	100	76.628	ENSMAUG00000020552	-	100	78.824	Mesocricetus_auratus
ENSGALG00000007237	ALYREF	100	82.625	ENSMICG00000017403	ALYREF	97	84.170	Microcebus_murinus
ENSGALG00000007237	ALYREF	100	79.693	ENSMOCG00000016792	-	100	78.927	Microtus_ochrogaster
ENSGALG00000007237	ALYREF	99	84.496	ENSMODG00000003030	ALYREF	84	84.496	Monodelphis_domestica
ENSGALG00000007237	ALYREF	100	68.635	ENSMALG00000019408	ALYREF	100	70.111	Monopterus_albus
ENSGALG00000007237	ALYREF	100	83.846	MGP_CAROLIEiJ_G0017529	Alyref	100	84.496	Mus_caroli
ENSGALG00000007237	ALYREF	100	71.373	MGP_CAROLIEiJ_G0014874	Alyref2	100	70.588	Mus_caroli
ENSGALG00000007237	ALYREF	91	63.948	ENSMUSG00000096640	Gm4312	62	62.189	Mus_musculus
ENSGALG00000007237	ALYREF	100	60.424	ENSMUSG00000097878	Gm8764	98	59.146	Mus_musculus
ENSGALG00000007237	ALYREF	100	60.424	ENSMUSG00000097427	Gm6763	98	59.146	Mus_musculus
ENSGALG00000007237	ALYREF	100	60.424	ENSMUSG00000097550	Gm21304	100	52.837	Mus_musculus
ENSGALG00000007237	ALYREF	91	64.655	ENSMUSG00000096744	Gm4307	62	63.184	Mus_musculus
ENSGALG00000007237	ALYREF	100	60.424	ENSMUSG00000094144	Gm21312	100	52.837	Mus_musculus
ENSGALG00000007237	ALYREF	100	62.121	ENSMUSG00000086727	4931428L18Rik	100	54.198	Mus_musculus
ENSGALG00000007237	ALYREF	100	70.980	ENSMUSG00000060244	Alyref2	100	69.020	Mus_musculus
ENSGALG00000007237	ALYREF	100	61.742	ENSMUSG00000117091	AC153137.1	100	55.725	Mus_musculus
ENSGALG00000007237	ALYREF	91	64.655	ENSMUSG00000112931	Gm4303	62	63.184	Mus_musculus
ENSGALG00000007237	ALYREF	100	60.424	ENSMUSG00000095022	Gm20765	100	52.837	Mus_musculus
ENSGALG00000007237	ALYREF	100	60.424	ENSMUSG00000091779	Gm21293	100	52.837	Mus_musculus
ENSGALG00000007237	ALYREF	100	59.582	ENSMUSG00000090854	Gm4340	100	51.748	Mus_musculus
ENSGALG00000007237	ALYREF	91	64.807	ENSMUSG00000091101	Gm4302	61	63.184	Mus_musculus
ENSGALG00000007237	ALYREF	91	64.655	ENSMUSG00000112856	Gm4305	62	63.184	Mus_musculus
ENSGALG00000007237	ALYREF	91	63.948	ENSMUSG00000094314	Gm4301	62	62.189	Mus_musculus
ENSGALG00000007237	ALYREF	100	83.846	ENSMUSG00000025134	Alyref	100	84.496	Mus_musculus
ENSGALG00000007237	ALYREF	73	82.632	MGP_PahariEiJ_G0018656	-	99	82.105	Mus_pahari
ENSGALG00000007237	ALYREF	100	83.846	MGP_PahariEiJ_G0018655	-	100	84.496	Mus_pahari
ENSGALG00000007237	ALYREF	82	66.667	MGP_PahariEiJ_G0027255	-	80	63.682	Mus_pahari
ENSGALG00000007237	ALYREF	82	66.667	MGP_PahariEiJ_G0027254	-	82	63.682	Mus_pahari
ENSGALG00000007237	ALYREF	100	83.846	MGP_SPRETEiJ_G0018373	Alyref	100	84.496	Mus_spretus
ENSGALG00000007237	ALYREF	100	70.588	MGP_SPRETEiJ_G0015679	Alyref2	100	68.627	Mus_spretus
ENSGALG00000007237	ALYREF	70	56.388	MGP_SPRETEiJ_G0016590	-	55	75.806	Mus_spretus
ENSGALG00000007237	ALYREF	98	66.400	ENSMLUG00000027516	-	78	66.800	Myotis_lucifugus
ENSGALG00000007237	ALYREF	98	61.200	ENSMLUG00000024447	-	76	59.200	Myotis_lucifugus
ENSGALG00000007237	ALYREF	98	61.600	ENSMLUG00000024976	-	79	60.956	Myotis_lucifugus
ENSGALG00000007237	ALYREF	98	63.855	ENSMLUG00000026271	-	79	59.839	Myotis_lucifugus
ENSGALG00000007237	ALYREF	98	57.874	ENSMLUG00000022869	-	69	63.131	Myotis_lucifugus
ENSGALG00000007237	ALYREF	98	55.985	ENSMLUG00000024471	-	82	53.876	Myotis_lucifugus
ENSGALG00000007237	ALYREF	69	66.292	ENSMLUG00000028343	-	85	63.483	Myotis_lucifugus
ENSGALG00000007237	ALYREF	98	60.800	ENSMLUG00000027352	-	77	60.400	Myotis_lucifugus
ENSGALG00000007237	ALYREF	98	55.253	ENSMLUG00000015043	-	98	53.516	Myotis_lucifugus
ENSGALG00000007237	ALYREF	98	59.289	ENSMLUG00000030407	-	77	59.289	Myotis_lucifugus
ENSGALG00000007237	ALYREF	100	51.481	ENSMLUG00000023213	-	100	49.813	Myotis_lucifugus
ENSGALG00000007237	ALYREF	98	63.386	ENSMLUG00000002626	-	98	63.780	Myotis_lucifugus
ENSGALG00000007237	ALYREF	98	60.870	ENSMLUG00000025677	-	77	61.265	Myotis_lucifugus
ENSGALG00000007237	ALYREF	74	89.894	ENSMLUG00000009555	-	68	88.830	Myotis_lucifugus
ENSGALG00000007237	ALYREF	100	83.784	ENSNLEG00000010313	ALYREF	97	84.170	Nomascus_leucogenys
ENSGALG00000007237	ALYREF	80	70.048	ENSMEUG00000002210	ALYREF	89	70.443	Notamacropus_eugenii
ENSGALG00000007237	ALYREF	53	91.045	ENSOPRG00000005551	-	52	92.537	Ochotona_princeps
ENSGALG00000007237	ALYREF	100	82.061	ENSODEG00000008359	ALYREF	100	82.443	Octodon_degus
ENSGALG00000007237	ALYREF	100	69.742	ENSORLG00000012331	ALYREF	100	69.742	Oryzias_latipes
ENSGALG00000007237	ALYREF	70	92.778	ENSOGAG00000012409	ALYREF	76	91.667	Otolemur_garnettii
ENSGALG00000007237	ALYREF	70	94.944	ENSOARG00000017932	ALYREF	67	94.944	Ovis_aries
ENSGALG00000007237	ALYREF	100	83.784	ENSPPRG00000010829	ALYREF	98	84.170	Panthera_pardus
ENSGALG00000007237	ALYREF	57	96.575	ENSPTIG00000006399	ALYREF	81	96.575	Panthera_tigris_altaica
ENSGALG00000007237	ALYREF	100	83.784	ENSPTRG00000009774	ALYREF	97	84.170	Pan_troglodytes
ENSGALG00000007237	ALYREF	100	83.784	ENSPANG00000019265	ALYREF	97	84.170	Papio_anubis
ENSGALG00000007237	ALYREF	52	90.226	ENSPSIG00000017541	ALYREF	98	93.985	Pelodiscus_sinensis
ENSGALG00000007237	ALYREF	100	83.398	ENSPPYG00000008749	ALYREF	97	84.170	Pongo_abelii
ENSGALG00000007237	ALYREF	100	82.625	ENSPCOG00000020874	ALYREF	97	84.170	Propithecus_coquereli
ENSGALG00000007237	ALYREF	100	77.220	ENSPVAG00000017866	ALYREF	100	77.220	Pteropus_vampyrus
ENSGALG00000007237	ALYREF	67	78.857	ENSRNOG00000036687	Alyref	91	79.885	Rattus_norvegicus
ENSGALG00000007237	ALYREF	71	91.713	ENSRBIG00000039651	ALYREF	74	91.713	Rhinopithecus_bieti
ENSGALG00000007237	ALYREF	80	88.462	ENSRROG00000045364	ALYREF	80	90.686	Rhinopithecus_roxellana
ENSGALG00000007237	ALYREF	75	90.526	ENSSHAG00000010459	ALYREF	98	90.526	Sarcophilus_harrisii
ENSGALG00000007237	ALYREF	100	50.725	ENSSDUG00000003992	-	100	50.890	Seriola_dumerili
ENSGALG00000007237	ALYREF	100	51.282	ENSSLDG00000005386	-	100	53.237	Seriola_lalandi_dorsalis
ENSGALG00000007237	ALYREF	100	85.659	ENSSPUG00000004600	ALYREF	100	84.496	Sphenodon_punctatus
ENSGALG00000007237	ALYREF	100	71.636	ENSSPAG00000011178	ALYREF	97	71.273	Stegastes_partitus
ENSGALG00000007237	ALYREF	100	84.496	ENSSSCG00000032655	ALYREF	100	84.496	Sus_scrofa
ENSGALG00000007237	ALYREF	52	95.455	ENSTGUG00000003513	ALYREF	100	93.333	Taeniopygia_guttata
ENSGALG00000007237	ALYREF	100	70.632	ENSTRUG00000008828	ALYREF	100	70.037	Takifugu_rubripes
ENSGALG00000007237	ALYREF	70	95.531	ENSTBEG00000005834	ALYREF	100	95.531	Tupaia_belangeri
ENSGALG00000007237	ALYREF	100	82.239	ENSTTRG00000012275	ALYREF	100	82.625	Tursiops_truncatus
ENSGALG00000007237	ALYREF	69	81.921	ENSUAMG00000016931	ALYREF	66	83.051	Ursus_americanus
ENSGALG00000007237	ALYREF	69	81.921	ENSUMAG00000016384	ALYREF	65	83.051	Ursus_maritimus
ENSGALG00000007237	ALYREF	100	79.771	ENSXETG00000005391	alyref	100	78.927	Xenopus_tropicalis