EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000007370 (Gene tree)
Gene ID: 423131
Gene Symbol: CLP1
Alias: -
Full Name: Polyribonucleotide 5'-hydroxyl-kinase Clp1
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 3346 bases
Position: chr5:17248507-17251852
Accession: Q5ZJL4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000011907	Clp1	PF06807.14	3.6e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000011921	CLP1-201	2709	-	ENSGALP00000011907	425 (aa)	-	Q5ZJL4

Gene Model

Click here to download ENSGALG00000007370's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000007370's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000007370	CLP1	100	93.412	ENSG00000172409	CLP1	100	93.412	Homo_sapiens
ENSGALG00000007370	CLP1	98	76.179	ENSAPOG00000008242	clp1	96	76.179	Acanthochromis_polyacanthus
ENSGALG00000007370	CLP1	100	92.941	ENSAMEG00000014551	CLP1	98	92.941	Ailuropoda_melanoleuca
ENSGALG00000007370	CLP1	98	76.179	ENSACIG00000006310	clp1	95	76.179	Amphilophus_citrinellus
ENSGALG00000007370	CLP1	98	76.179	ENSAOCG00000010681	clp1	98	76.303	Amphiprion_ocellaris
ENSGALG00000007370	CLP1	99	75.581	ENSAPEG00000012165	clp1	100	75.581	Amphiprion_percula
ENSGALG00000007370	CLP1	99	75.694	ENSATEG00000012374	clp1	98	75.694	Anabas_testudineus
ENSGALG00000007370	CLP1	100	95.059	ENSACAG00000007139	CLP1	100	95.059	Anolis_carolinensis
ENSGALG00000007370	CLP1	100	93.412	ENSANAG00000034935	CLP1	100	93.412	Aotus_nancymaae
ENSGALG00000007370	CLP1	99	75.000	ENSACLG00000013573	clp1	98	75.000	Astatotilapia_calliptera
ENSGALG00000007370	CLP1	97	79.286	ENSAMXG00000014194	clp1	98	79.097	Astyanax_mexicanus
ENSGALG00000007370	CLP1	100	92.941	ENSBTAG00000006493	CLP1	100	92.941	Bos_taurus
ENSGALG00000007370	CLP1	98	47.630	WBGene00010304	clpf-1	98	47.630	Caenorhabditis_elegans
ENSGALG00000007370	CLP1	100	93.412	ENSCJAG00000008748	CLP1	100	93.412	Callithrix_jacchus
ENSGALG00000007370	CLP1	100	92.941	ENSCAFG00000007815	CLP1	100	92.941	Canis_familiaris
ENSGALG00000007370	CLP1	100	92.941	ENSCAFG00020000903	CLP1	100	92.941	Canis_lupus_dingo
ENSGALG00000007370	CLP1	100	92.706	ENSCHIG00000023497	CLP1	100	92.706	Capra_hircus
ENSGALG00000007370	CLP1	100	93.412	ENSTSYG00000006824	CLP1	99	93.412	Carlito_syrichta
ENSGALG00000007370	CLP1	100	92.941	ENSCAPG00000009703	CLP1	100	92.941	Cavia_aperea
ENSGALG00000007370	CLP1	98	94.471	ENSCPOG00000012554	CLP1	99	94.471	Cavia_porcellus
ENSGALG00000007370	CLP1	100	93.176	ENSCCAG00000031957	CLP1	100	93.176	Cebus_capucinus
ENSGALG00000007370	CLP1	100	93.412	ENSCATG00000044628	CLP1	100	93.412	Cercocebus_atys
ENSGALG00000007370	CLP1	100	93.176	ENSCLAG00000004094	CLP1	100	93.176	Chinchilla_lanigera
ENSGALG00000007370	CLP1	100	93.412	ENSCSAG00000005994	CLP1	100	93.412	Chlorocebus_sabaeus
ENSGALG00000007370	CLP1	100	96.235	ENSCPBG00000016843	CLP1	100	96.235	Chrysemys_picta_bellii
ENSGALG00000007370	CLP1	97	64.234	ENSCING00000003779	-	96	64.234	Ciona_intestinalis
ENSGALG00000007370	CLP1	99	62.648	ENSCSAVG00000003437	-	99	62.648	Ciona_savignyi
ENSGALG00000007370	CLP1	100	93.412	ENSCANG00000034335	CLP1	100	93.412	Colobus_angolensis_palliatus
ENSGALG00000007370	CLP1	100	92.706	ENSCGRG00001002227	CLP1	100	92.706	Cricetulus_griseus_chok1gshd
ENSGALG00000007370	CLP1	100	92.706	ENSCGRG00000004328	CLP1	100	92.706	Cricetulus_griseus_crigri
ENSGALG00000007370	CLP1	99	74.478	ENSCSEG00000008614	clp1	98	74.478	Cynoglossus_semilaevis
ENSGALG00000007370	CLP1	99	75.694	ENSCVAG00000020101	clp1	98	75.694	Cyprinodon_variegatus
ENSGALG00000007370	CLP1	97	79.426	ENSDARG00000063663	clp1	96	78.169	Danio_rerio
ENSGALG00000007370	CLP1	99	92.925	ENSDNOG00000042415	CLP1	90	92.925	Dasypus_novemcinctus
ENSGALG00000007370	CLP1	100	92.941	ENSDORG00000014685	Clp1	100	92.941	Dipodomys_ordii
ENSGALG00000007370	CLP1	99	55.634	FBgn0033842	cbc	99	55.634	Drosophila_melanogaster
ENSGALG00000007370	CLP1	100	93.176	ENSETEG00000003009	CLP1	100	93.176	Echinops_telfairi
ENSGALG00000007370	CLP1	98	73.621	ENSEBUG00000011648	clp1	98	73.621	Eptatretus_burgeri
ENSGALG00000007370	CLP1	100	93.412	ENSEASG00005002093	CLP1	100	93.412	Equus_asinus_asinus
ENSGALG00000007370	CLP1	100	93.412	ENSECAG00000011597	CLP1	100	93.412	Equus_caballus
ENSGALG00000007370	CLP1	100	92.706	ENSEEUG00000012771	CLP1	100	92.706	Erinaceus_europaeus
ENSGALG00000007370	CLP1	97	79.048	ENSELUG00000024048	clp1	95	79.048	Esox_lucius
ENSGALG00000007370	CLP1	100	92.941	ENSFCAG00000006633	CLP1	100	92.941	Felis_catus
ENSGALG00000007370	CLP1	100	97.882	ENSFALG00000011145	CLP1	100	97.882	Ficedula_albicollis
ENSGALG00000007370	CLP1	100	93.176	ENSFDAG00000000234	CLP1	100	93.176	Fukomys_damarensis
ENSGALG00000007370	CLP1	99	75.000	ENSFHEG00000014760	CLP1	98	75.000	Fundulus_heteroclitus
ENSGALG00000007370	CLP1	97	79.616	ENSGMOG00000019340	clp1	95	79.616	Gadus_morhua
ENSGALG00000007370	CLP1	99	75.926	ENSGAFG00000003020	clp1	99	75.926	Gambusia_affinis
ENSGALG00000007370	CLP1	98	76.887	ENSGACG00000017832	clp1	96	76.887	Gasterosteus_aculeatus
ENSGALG00000007370	CLP1	100	96.235	ENSGAGG00000013279	CLP1	100	96.235	Gopherus_agassizii
ENSGALG00000007370	CLP1	100	93.412	ENSGGOG00000023006	CLP1	100	93.412	Gorilla_gorilla
ENSGALG00000007370	CLP1	99	74.769	ENSHBUG00000010436	clp1	98	74.769	Haplochromis_burtoni
ENSGALG00000007370	CLP1	100	93.176	ENSHGLG00000009914	CLP1	100	93.176	Heterocephalus_glaber_female
ENSGALG00000007370	CLP1	100	93.176	ENSHGLG00100006105	CLP1	100	93.176	Heterocephalus_glaber_male
ENSGALG00000007370	CLP1	99	76.620	ENSHCOG00000010072	clp1	98	76.620	Hippocampus_comes
ENSGALG00000007370	CLP1	97	79.762	ENSIPUG00000016238	clp1	96	78.009	Ictalurus_punctatus
ENSGALG00000007370	CLP1	100	93.176	ENSSTOG00000029257	CLP1	100	93.176	Ictidomys_tridecemlineatus
ENSGALG00000007370	CLP1	100	92.471	ENSJJAG00000023691	Clp1	100	92.471	Jaculus_jaculus
ENSGALG00000007370	CLP1	99	75.463	ENSKMAG00000011990	clp1	98	75.463	Kryptolebias_marmoratus
ENSGALG00000007370	CLP1	99	75.694	ENSLBEG00000010201	clp1	98	75.694	Labrus_bergylta
ENSGALG00000007370	CLP1	100	86.353	ENSLACG00000003160	CLP1	100	86.353	Latimeria_chalumnae
ENSGALG00000007370	CLP1	73	77.019	ENSLOCG00000008074	clp1	100	77.019	Lepisosteus_oculatus
ENSGALG00000007370	CLP1	100	92.941	ENSLAFG00000014907	CLP1	100	92.941	Loxodonta_africana
ENSGALG00000007370	CLP1	100	93.412	ENSMFAG00000046074	CLP1	100	93.412	Macaca_fascicularis
ENSGALG00000007370	CLP1	100	93.412	ENSMMUG00000038007	CLP1	99	93.412	Macaca_mulatta
ENSGALG00000007370	CLP1	100	93.412	ENSMNEG00000000259	CLP1	100	93.412	Macaca_nemestrina
ENSGALG00000007370	CLP1	100	93.412	ENSMLEG00000043556	CLP1	100	93.412	Mandrillus_leucophaeus
ENSGALG00000007370	CLP1	100	75.751	ENSMAMG00000002149	clp1	98	75.751	Mastacembelus_armatus
ENSGALG00000007370	CLP1	99	75.000	ENSMZEG00005002850	clp1	98	75.000	Maylandia_zebra
ENSGALG00000007370	CLP1	100	100.000	ENSMGAG00000009643	CLP1	100	100.000	Meleagris_gallopavo
ENSGALG00000007370	CLP1	100	92.941	ENSMAUG00000016261	Clp1	100	92.941	Mesocricetus_auratus
ENSGALG00000007370	CLP1	100	92.941	ENSMICG00000004895	CLP1	100	92.941	Microcebus_murinus
ENSGALG00000007370	CLP1	100	92.941	ENSMOCG00000005498	Clp1	100	92.941	Microtus_ochrogaster
ENSGALG00000007370	CLP1	99	77.546	ENSMMOG00000003229	clp1	98	77.546	Mola_mola
ENSGALG00000007370	CLP1	100	93.647	ENSMODG00000020107	-	100	93.647	Monodelphis_domestica
ENSGALG00000007370	CLP1	100	93.647	ENSMODG00000024148	-	100	93.647	Monodelphis_domestica
ENSGALG00000007370	CLP1	100	74.827	ENSMALG00000014239	clp1	98	74.827	Monopterus_albus
ENSGALG00000007370	CLP1	100	92.471	MGP_CAROLIEiJ_G0023726	Clp1	100	92.471	Mus_caroli
ENSGALG00000007370	CLP1	100	92.471	ENSMUSG00000027079	Clp1	100	92.471	Mus_musculus
ENSGALG00000007370	CLP1	100	92.235	MGP_PahariEiJ_G0025177	Clp1	100	92.235	Mus_pahari
ENSGALG00000007370	CLP1	100	92.471	MGP_SPRETEiJ_G0024646	Clp1	100	92.471	Mus_spretus
ENSGALG00000007370	CLP1	100	92.941	ENSMPUG00000000268	CLP1	100	92.941	Mustela_putorius_furo
ENSGALG00000007370	CLP1	100	93.176	ENSMLUG00000007904	CLP1	100	93.176	Myotis_lucifugus
ENSGALG00000007370	CLP1	100	92.706	ENSNGAG00000006165	Clp1	100	92.706	Nannospalax_galili
ENSGALG00000007370	CLP1	99	75.000	ENSNBRG00000005225	clp1	98	75.000	Neolamprologus_brichardi
ENSGALG00000007370	CLP1	82	87.600	ENSNLEG00000012809	-	100	87.600	Nomascus_leucogenys
ENSGALG00000007370	CLP1	100	93.176	ENSMEUG00000010949	CLP1	99	93.176	Notamacropus_eugenii
ENSGALG00000007370	CLP1	70	94.966	ENSOPRG00000007329	CLP1	100	94.966	Ochotona_princeps
ENSGALG00000007370	CLP1	100	93.176	ENSODEG00000011410	CLP1	100	93.176	Octodon_degus
ENSGALG00000007370	CLP1	99	74.769	ENSONIG00000005089	clp1	98	74.769	Oreochromis_niloticus
ENSGALG00000007370	CLP1	100	93.176	ENSOCUG00000007045	CLP1	100	93.176	Oryctolagus_cuniculus
ENSGALG00000007370	CLP1	99	74.537	ENSORLG00000003647	clp1	98	74.537	Oryzias_latipes
ENSGALG00000007370	CLP1	99	74.306	ENSORLG00020016676	clp1	98	74.306	Oryzias_latipes_hni
ENSGALG00000007370	CLP1	99	74.537	ENSORLG00015019484	clp1	98	74.537	Oryzias_latipes_hsok
ENSGALG00000007370	CLP1	99	75.174	ENSOMEG00000021303	clp1	98	75.174	Oryzias_melastigma
ENSGALG00000007370	CLP1	100	92.941	ENSOGAG00000004508	CLP1	100	92.941	Otolemur_garnettii
ENSGALG00000007370	CLP1	100	91.529	ENSOARG00000010145	CLP1	98	91.529	Ovis_aries
ENSGALG00000007370	CLP1	100	93.412	ENSPPAG00000041519	CLP1	100	93.412	Pan_paniscus
ENSGALG00000007370	CLP1	100	92.941	ENSPPRG00000006135	CLP1	100	92.941	Panthera_pardus
ENSGALG00000007370	CLP1	100	92.941	ENSPTIG00000015866	CLP1	100	92.941	Panthera_tigris_altaica
ENSGALG00000007370	CLP1	100	93.412	ENSPTRG00000047318	CLP1	100	93.412	Pan_troglodytes
ENSGALG00000007370	CLP1	100	93.412	ENSPANG00000017078	CLP1	97	93.412	Papio_anubis
ENSGALG00000007370	CLP1	97	80.387	ENSPKIG00000007697	clp1	94	80.387	Paramormyrops_kingsleyae
ENSGALG00000007370	CLP1	95	94.030	ENSPSIG00000005468	CLP1	100	94.030	Pelodiscus_sinensis
ENSGALG00000007370	CLP1	97	77.857	ENSPMGG00000012171	clp1	95	77.857	Periophthalmus_magnuspinnatus
ENSGALG00000007370	CLP1	100	92.941	ENSPEMG00000011213	-	100	92.941	Peromyscus_maniculatus_bairdii
ENSGALG00000007370	CLP1	100	75.352	ENSPMAG00000006707	clp1	100	75.352	Petromyzon_marinus
ENSGALG00000007370	CLP1	100	93.647	ENSPCIG00000011899	CLP1	99	93.647	Phascolarctos_cinereus
ENSGALG00000007370	CLP1	99	75.694	ENSPFOG00000008169	clp1	98	75.694	Poecilia_formosa
ENSGALG00000007370	CLP1	99	75.870	ENSPLAG00000022388	clp1	99	75.870	Poecilia_latipinna
ENSGALG00000007370	CLP1	99	75.870	ENSPMEG00000021088	clp1	99	75.870	Poecilia_mexicana
ENSGALG00000007370	CLP1	99	75.694	ENSPREG00000017802	clp1	98	75.694	Poecilia_reticulata
ENSGALG00000007370	CLP1	53	94.643	ENSPPYG00000003266	-	100	94.643	Pongo_abelii
ENSGALG00000007370	CLP1	100	92.941	ENSPCOG00000000360	CLP1	98	92.941	Propithecus_coquereli
ENSGALG00000007370	CLP1	100	92.941	ENSPVAG00000016270	CLP1	100	92.941	Pteropus_vampyrus
ENSGALG00000007370	CLP1	99	74.769	ENSPNYG00000017274	clp1	97	74.769	Pundamilia_nyererei
ENSGALG00000007370	CLP1	97	79.762	ENSPNAG00000026460	clp1	94	79.762	Pygocentrus_nattereri
ENSGALG00000007370	CLP1	100	92.471	ENSRNOG00000007416	Clp1	100	92.471	Rattus_norvegicus
ENSGALG00000007370	CLP1	100	93.412	ENSRBIG00000018191	CLP1	100	93.412	Rhinopithecus_bieti
ENSGALG00000007370	CLP1	100	93.412	ENSRROG00000039265	CLP1	100	93.412	Rhinopithecus_roxellana
ENSGALG00000007370	CLP1	100	93.412	ENSSBOG00000032517	-	100	93.412	Saimiri_boliviensis_boliviensis
ENSGALG00000007370	CLP1	96	76.601	ENSSBOG00000010558	-	93	76.601	Saimiri_boliviensis_boliviensis
ENSGALG00000007370	CLP1	100	93.412	ENSSHAG00000015695	CLP1	100	93.412	Sarcophilus_harrisii
ENSGALG00000007370	CLP1	97	78.588	ENSSFOG00015000628	clp1	99	77.346	Scleropages_formosus
ENSGALG00000007370	CLP1	99	74.769	ENSSMAG00000019423	clp1	97	74.769	Scophthalmus_maximus
ENSGALG00000007370	CLP1	98	76.887	ENSSDUG00000014495	clp1	96	76.887	Seriola_dumerili
ENSGALG00000007370	CLP1	98	76.651	ENSSLDG00000000937	clp1	96	76.651	Seriola_lalandi_dorsalis
ENSGALG00000007370	CLP1	52	94.170	ENSSARG00000002459	CLP1	100	94.170	Sorex_araneus
ENSGALG00000007370	CLP1	100	96.235	ENSSPUG00000016811	CLP1	100	96.235	Sphenodon_punctatus
ENSGALG00000007370	CLP1	98	75.708	ENSSPAG00000016052	clp1	96	75.708	Stegastes_partitus
ENSGALG00000007370	CLP1	100	92.941	ENSSSCG00000031442	CLP1	100	92.941	Sus_scrofa
ENSGALG00000007370	CLP1	100	97.647	ENSTGUG00000007002	CLP1	100	97.647	Taeniopygia_guttata
ENSGALG00000007370	CLP1	99	76.636	ENSTRUG00000012602	clp1	98	76.636	Takifugu_rubripes
ENSGALG00000007370	CLP1	99	76.168	ENSTNIG00000013125	clp1	98	76.168	Tetraodon_nigroviridis
ENSGALG00000007370	CLP1	100	92.235	ENSTBEG00000009975	CLP1	100	92.235	Tupaia_belangeri
ENSGALG00000007370	CLP1	100	92.706	ENSTTRG00000002096	CLP1	100	92.706	Tursiops_truncatus
ENSGALG00000007370	CLP1	100	92.941	ENSUAMG00000011388	CLP1	100	92.941	Ursus_americanus
ENSGALG00000007370	CLP1	100	92.941	ENSUMAG00000018317	CLP1	100	92.941	Ursus_maritimus
ENSGALG00000007370	CLP1	100	92.941	ENSVVUG00000017138	CLP1	97	92.941	Vulpes_vulpes
ENSGALG00000007370	CLP1	97	79.227	ENSXETG00000007088	clp1	95	79.710	Xenopus_tropicalis
ENSGALG00000007370	CLP1	99	75.694	ENSXCOG00000002287	clp1	98	75.694	Xiphophorus_couchianus
ENSGALG00000007370	CLP1	99	75.694	ENSXMAG00000009783	clp1	98	75.694	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000214	tRNA-intron endonuclease complex	-	ISS	Component
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005849	mRNA cleavage factor complex	-	IEA	Component
GO:0006378	mRNA polyadenylation	21873635.	IBA	Process
GO:0006388	tRNA splicing, via endonucleolytic cleavage and ligation	21873635.	IBA	Process
GO:0006388	tRNA splicing, via endonucleolytic cleavage and ligation	-	ISS	Process
GO:0016310	phosphorylation	-	IEA	Process
GO:0021695	cerebellar cortex development	-	ISS	Process
GO:0030423	targeting of mRNA for destruction involved in RNA interference	-	ISS	Process
GO:0035087	siRNA loading onto RISC involved in RNA interference	-	ISS	Process
GO:0046404	ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity	-	IEA	Function
GO:0051733	polydeoxyribonucleotide kinase activity	-	ISS	Function
GO:0051736	ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity	-	ISS	Function