EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000007937 (Gene tree)
Gene ID: 427717
Gene Symbol: SF3A1
Alias: -
Full Name: Gallus gallus splicing factor 3a subunit 1 (SF3A1)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 13492 bases
Position: chr15:11112091-11125582
Accession: NM_001031472
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000012879	PRP21_like_P	PF12230.8	6.7e-52	1	1
ENSGALP00000012879	Surp	PF01805.20	6.4e-46	1	2
ENSGALP00000012879	Surp	PF01805.20	6.4e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000012894	-	3118	-	ENSGALP00000012879	790 (aa)	-	F1NU16

Gene Model

Click here to download ENSGALG00000007937's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000007937's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000007937	SF3A1	100	92.821	ENSG00000099995	SF3A1	95	94.048	Homo_sapiens
ENSGALG00000007937	SF3A1	100	84.151	ENSAPOG00000020465	sf3a1	96	84.960	Acanthochromis_polyacanthus
ENSGALG00000007937	SF3A1	97	93.498	ENSAMEG00000007737	SF3A1	95	94.180	Ailuropoda_melanoleuca
ENSGALG00000007937	SF3A1	100	84.005	ENSACIG00000020672	sf3a1	96	84.565	Amphilophus_citrinellus
ENSGALG00000007937	SF3A1	100	83.879	ENSAOCG00000003060	sf3a1	96	85.092	Amphiprion_ocellaris
ENSGALG00000007937	SF3A1	100	84.005	ENSAPEG00000010735	sf3a1	96	85.092	Amphiprion_percula
ENSGALG00000007937	SF3A1	96	84.876	ENSATEG00000021201	sf3a1	95	84.433	Anabas_testudineus
ENSGALG00000007937	SF3A1	97	99.610	ENSAPLG00000009057	SF3A1	99	99.610	Anas_platyrhynchos
ENSGALG00000007937	SF3A1	100	87.145	ENSACAG00000009415	SF3A1	96	89.521	Anolis_carolinensis
ENSGALG00000007937	SF3A1	100	92.695	ENSANAG00000032045	SF3A1	95	94.444	Aotus_nancymaae
ENSGALG00000007937	SF3A1	100	83.965	ENSACLG00000012622	sf3a1	96	86.376	Astatotilapia_calliptera
ENSGALG00000007937	SF3A1	97	84.204	ENSAMXG00000005382	sf3a1	97	84.737	Astyanax_mexicanus
ENSGALG00000007937	SF3A1	100	92.443	ENSBTAG00000003390	SF3A1	95	94.180	Bos_taurus
ENSGALG00000007937	SF3A1	83	44.790	WBGene00004188	prp-21	88	45.098	Caenorhabditis_elegans
ENSGALG00000007937	SF3A1	100	92.695	ENSCJAG00000010370	SF3A1	95	94.444	Callithrix_jacchus
ENSGALG00000007937	SF3A1	100	92.443	ENSCAFG00000012559	SF3A1	95	94.180	Canis_familiaris
ENSGALG00000007937	SF3A1	100	92.443	ENSCAFG00020000838	SF3A1	95	94.180	Canis_lupus_dingo
ENSGALG00000007937	SF3A1	100	92.317	ENSCHIG00000018642	SF3A1	95	94.048	Capra_hircus
ENSGALG00000007937	SF3A1	100	92.317	ENSTSYG00000004739	SF3A1	95	94.180	Carlito_syrichta
ENSGALG00000007937	SF3A1	95	76.393	ENSCAPG00000015414	SF3A1	96	77.143	Cavia_aperea
ENSGALG00000007937	SF3A1	100	92.569	ENSCPOG00000014589	SF3A1	95	94.048	Cavia_porcellus
ENSGALG00000007937	SF3A1	100	92.695	ENSCCAG00000032006	SF3A1	95	94.444	Cebus_capucinus
ENSGALG00000007937	SF3A1	100	92.317	ENSCATG00000029241	SF3A1	95	94.180	Cercocebus_atys
ENSGALG00000007937	SF3A1	100	91.940	ENSCLAG00000006508	SF3A1	95	93.651	Chinchilla_lanigera
ENSGALG00000007937	SF3A1	100	92.443	ENSCSAG00000009470	SF3A1	95	94.180	Chlorocebus_sabaeus
ENSGALG00000007937	SF3A1	58	96.190	ENSCHOG00000005201	SF3A1	64	96.190	Choloepus_hoffmanni
ENSGALG00000007937	SF3A1	100	95.823	ENSCPBG00000007595	SF3A1	100	95.823	Chrysemys_picta_bellii
ENSGALG00000007937	SF3A1	94	52.249	ENSCING00000008526	-	96	51.958	Ciona_intestinalis
ENSGALG00000007937	SF3A1	86	67.636	ENSCSAVG00000005608	-	91	63.559	Ciona_savignyi
ENSGALG00000007937	SF3A1	100	92.443	ENSCANG00000033564	SF3A1	95	94.180	Colobus_angolensis_palliatus
ENSGALG00000007937	SF3A1	96	93.693	ENSCGRG00001008933	Sf3a1	95	93.783	Cricetulus_griseus_chok1gshd
ENSGALG00000007937	SF3A1	96	93.693	ENSCGRG00000006127	Sf3a1	95	93.783	Cricetulus_griseus_crigri
ENSGALG00000007937	SF3A1	100	81.360	ENSCSEG00000010792	sf3a1	96	83.509	Cynoglossus_semilaevis
ENSGALG00000007937	SF3A1	100	82.620	ENSCVAG00000004560	sf3a1	96	83.091	Cyprinodon_variegatus
ENSGALG00000007937	SF3A1	100	82.219	ENSDARG00000041887	sf3a1	96	84.544	Danio_rerio
ENSGALG00000007937	SF3A1	97	93.041	ENSDNOG00000010629	SF3A1	95	93.404	Dasypus_novemcinctus
ENSGALG00000007937	SF3A1	100	92.695	ENSDORG00000005613	Sf3a1	95	94.180	Dipodomys_ordii
ENSGALG00000007937	SF3A1	65	60.401	FBgn0266917	Sf3a1	68	60.595	Drosophila_melanogaster
ENSGALG00000007937	SF3A1	84	93.862	ENSETEG00000017194	SF3A1	95	93.524	Echinops_telfairi
ENSGALG00000007937	SF3A1	99	67.357	ENSEBUG00000001285	sf3a1	94	68.608	Eptatretus_burgeri
ENSGALG00000007937	SF3A1	100	92.443	ENSEASG00005010254	SF3A1	95	94.180	Equus_asinus_asinus
ENSGALG00000007937	SF3A1	100	92.443	ENSECAG00000023962	SF3A1	95	94.180	Equus_caballus
ENSGALG00000007937	SF3A1	73	93.443	ENSEEUG00000003159	SF3A1	79	93.443	Erinaceus_europaeus
ENSGALG00000007937	SF3A1	100	81.179	ENSELUG00000022578	sf3a1	96	82.152	Esox_lucius
ENSGALG00000007937	SF3A1	100	92.569	ENSFCAG00000011932	SF3A1	95	94.312	Felis_catus
ENSGALG00000007937	SF3A1	100	97.848	ENSFALG00000006944	SF3A1	100	97.848	Ficedula_albicollis
ENSGALG00000007937	SF3A1	100	91.940	ENSFDAG00000009560	SF3A1	95	93.783	Fukomys_damarensis
ENSGALG00000007937	SF3A1	100	82.685	ENSFHEG00000010866	sf3a1	96	85.488	Fundulus_heteroclitus
ENSGALG00000007937	SF3A1	100	80.405	ENSGMOG00000016024	sf3a1	96	80.079	Gadus_morhua
ENSGALG00000007937	SF3A1	100	82.746	ENSGAFG00000009111	sf3a1	96	83.752	Gambusia_affinis
ENSGALG00000007937	SF3A1	100	81.669	ENSGACG00000011893	sf3a1	96	82.781	Gasterosteus_aculeatus
ENSGALG00000007937	SF3A1	96	95.641	ENSGAGG00000000762	SF3A1	99	95.641	Gopherus_agassizii
ENSGALG00000007937	SF3A1	100	92.821	ENSGGOG00000012631	SF3A1	95	94.048	Gorilla_gorilla
ENSGALG00000007937	SF3A1	100	83.965	ENSHBUG00000015795	sf3a1	96	86.376	Haplochromis_burtoni
ENSGALG00000007937	SF3A1	100	92.191	ENSHGLG00000007907	SF3A1	95	94.048	Heterocephalus_glaber_female
ENSGALG00000007937	SF3A1	100	92.191	ENSHGLG00100013799	SF3A1	95	94.048	Heterocephalus_glaber_male
ENSGALG00000007937	SF3A1	100	80.202	ENSHCOG00000015423	sf3a1	97	81.506	Hippocampus_comes
ENSGALG00000007937	SF3A1	97	81.842	ENSIPUG00000002470	sf3a1	97	82.740	Ictalurus_punctatus
ENSGALG00000007937	SF3A1	100	92.443	ENSSTOG00000013892	SF3A1	95	94.312	Ictidomys_tridecemlineatus
ENSGALG00000007937	SF3A1	97	93.661	ENSJJAG00000022566	Sf3a1	95	94.312	Jaculus_jaculus
ENSGALG00000007937	SF3A1	100	82.242	ENSKMAG00000002400	sf3a1	96	84.169	Kryptolebias_marmoratus
ENSGALG00000007937	SF3A1	100	82.093	ENSLBEG00000022974	sf3a1	96	84.169	Labrus_bergylta
ENSGALG00000007937	SF3A1	100	85.390	ENSLACG00000003565	SF3A1	96	88.391	Latimeria_chalumnae
ENSGALG00000007937	SF3A1	100	85.302	ENSLOCG00000008251	sf3a1	96	87.500	Lepisosteus_oculatus
ENSGALG00000007937	SF3A1	100	92.317	ENSLAFG00000000448	SF3A1	95	94.312	Loxodonta_africana
ENSGALG00000007937	SF3A1	99	58.764	ENSLAFG00000026032	-	96	59.474	Loxodonta_africana
ENSGALG00000007937	SF3A1	100	92.317	ENSMFAG00000031979	SF3A1	95	94.048	Macaca_fascicularis
ENSGALG00000007937	SF3A1	100	92.317	ENSMMUG00000005547	SF3A1	95	94.048	Macaca_mulatta
ENSGALG00000007937	SF3A1	100	92.443	ENSMNEG00000037229	SF3A1	95	94.180	Macaca_nemestrina
ENSGALG00000007937	SF3A1	100	92.443	ENSMLEG00000041908	SF3A1	95	94.180	Mandrillus_leucophaeus
ENSGALG00000007937	SF3A1	96	85.640	ENSMAMG00000006460	sf3a1	95	85.092	Mastacembelus_armatus
ENSGALG00000007937	SF3A1	100	83.965	ENSMZEG00005009633	sf3a1	96	86.376	Maylandia_zebra
ENSGALG00000007937	SF3A1	97	100.000	ENSMGAG00000001330	SF3A1	99	100.000	Meleagris_gallopavo
ENSGALG00000007937	SF3A1	93	90.041	ENSMAUG00000020317	Sf3a1	94	89.905	Mesocricetus_auratus
ENSGALG00000007937	SF3A1	100	92.443	ENSMICG00000010038	SF3A1	95	94.312	Microcebus_murinus
ENSGALG00000007937	SF3A1	100	92.317	ENSMOCG00000008438	Sf3a1	95	94.048	Microtus_ochrogaster
ENSGALG00000007937	SF3A1	99	81.714	ENSMMOG00000015588	sf3a1	96	81.506	Mola_mola
ENSGALG00000007937	SF3A1	100	92.929	ENSMODG00000009270	SF3A1	95	95.099	Monodelphis_domestica
ENSGALG00000007937	SF3A1	100	83.228	ENSMALG00000000148	sf3a1	99	83.946	Monopterus_albus
ENSGALG00000007937	SF3A1	98	92.416	MGP_CAROLIEiJ_G0016029	Sf3a1	95	93.519	Mus_caroli
ENSGALG00000007937	SF3A1	98	92.416	ENSMUSG00000002129	Sf3a1	95	93.519	Mus_musculus
ENSGALG00000007937	SF3A1	98	92.288	MGP_PahariEiJ_G0016862	Sf3a1	95	93.386	Mus_pahari
ENSGALG00000007937	SF3A1	98	92.416	MGP_SPRETEiJ_G0016870	Sf3a1	95	93.519	Mus_spretus
ENSGALG00000007937	SF3A1	100	92.191	ENSMPUG00000013144	SF3A1	95	94.048	Mustela_putorius_furo
ENSGALG00000007937	SF3A1	100	92.191	ENSMLUG00000002139	SF3A1	95	94.180	Myotis_lucifugus
ENSGALG00000007937	SF3A1	100	92.569	ENSNGAG00000016977	Sf3a1	95	93.915	Nannospalax_galili
ENSGALG00000007937	SF3A1	100	83.965	ENSNBRG00000016642	sf3a1	96	86.376	Neolamprologus_brichardi
ENSGALG00000007937	SF3A1	100	92.443	ENSNLEG00000003686	SF3A1	95	94.180	Nomascus_leucogenys
ENSGALG00000007937	SF3A1	96	84.848	ENSMEUG00000008741	SF3A1	95	86.150	Notamacropus_eugenii
ENSGALG00000007937	SF3A1	97	93.856	ENSOPRG00000016636	SF3A1	95	94.180	Ochotona_princeps
ENSGALG00000007937	SF3A1	100	92.308	ENSODEG00000002571	SF3A1	95	94.048	Octodon_degus
ENSGALG00000007937	SF3A1	100	82.346	ENSONIG00000010848	sf3a1	96	84.941	Oreochromis_niloticus
ENSGALG00000007937	SF3A1	100	92.191	ENSOCUG00000007633	SF3A1	95	94.048	Oryctolagus_cuniculus
ENSGALG00000007937	SF3A1	96	82.523	ENSORLG00000013050	sf3a1	95	85.083	Oryzias_latipes
ENSGALG00000007937	SF3A1	98	81.596	ENSORLG00020003236	sf3a1	93	83.649	Oryzias_latipes_hni
ENSGALG00000007937	SF3A1	100	82.598	ENSORLG00015017411	sf3a1	96	84.921	Oryzias_latipes_hsok
ENSGALG00000007937	SF3A1	100	82.828	ENSOMEG00000013362	sf3a1	96	84.788	Oryzias_melastigma
ENSGALG00000007937	SF3A1	100	92.191	ENSOGAG00000012931	SF3A1	95	94.048	Otolemur_garnettii
ENSGALG00000007937	SF3A1	100	90.302	ENSOARG00000006849	SF3A1	95	91.799	Ovis_aries
ENSGALG00000007937	SF3A1	100	91.814	ENSPPAG00000041790	SF3A1	95	92.857	Pan_paniscus
ENSGALG00000007937	SF3A1	100	92.569	ENSPPRG00000004391	SF3A1	95	94.312	Panthera_pardus
ENSGALG00000007937	SF3A1	97	93.402	ENSPTIG00000000844	SF3A1	98	94.048	Panthera_tigris_altaica
ENSGALG00000007937	SF3A1	100	92.821	ENSPTRG00000014240	SF3A1	95	94.048	Pan_troglodytes
ENSGALG00000007937	SF3A1	100	92.443	ENSPANG00000020772	SF3A1	95	94.180	Papio_anubis
ENSGALG00000007937	SF3A1	83	94.505	ENSPSIG00000012803	SF3A1	93	97.665	Pelodiscus_sinensis
ENSGALG00000007937	SF3A1	96	83.879	ENSPMGG00000023096	sf3a1	99	84.238	Periophthalmus_magnuspinnatus
ENSGALG00000007937	SF3A1	96	93.955	ENSPEMG00000009494	Sf3a1	95	94.048	Peromyscus_maniculatus_bairdii
ENSGALG00000007937	SF3A1	69	77.372	ENSPMAG00000007139	-	87	80.000	Petromyzon_marinus
ENSGALG00000007937	SF3A1	100	92.677	ENSPCIG00000022692	SF3A1	95	94.702	Phascolarctos_cinereus
ENSGALG00000007937	SF3A1	100	74.623	ENSPFOG00000016768	sf3a1	93	77.959	Poecilia_formosa
ENSGALG00000007937	SF3A1	100	82.936	ENSPLAG00000017268	sf3a1	96	84.301	Poecilia_latipinna
ENSGALG00000007937	SF3A1	84	84.581	ENSPMEG00000019811	sf3a1	98	84.488	Poecilia_mexicana
ENSGALG00000007937	SF3A1	100	83.627	ENSPREG00000010347	sf3a1	96	84.960	Poecilia_reticulata
ENSGALG00000007937	SF3A1	100	92.443	ENSPPYG00000011707	SF3A1	95	94.180	Pongo_abelii
ENSGALG00000007937	SF3A1	57	95.851	ENSPCAG00000003266	SF3A1	56	95.851	Procavia_capensis
ENSGALG00000007937	SF3A1	100	92.569	ENSPCOG00000026630	SF3A1	95	94.444	Propithecus_coquereli
ENSGALG00000007937	SF3A1	94	92.895	ENSPVAG00000017719	SF3A1	94	92.627	Pteropus_vampyrus
ENSGALG00000007937	SF3A1	100	83.965	ENSPNYG00000018706	sf3a1	96	86.376	Pundamilia_nyererei
ENSGALG00000007937	SF3A1	99	82.719	ENSPNAG00000003721	sf3a1	97	84.211	Pygocentrus_nattereri
ENSGALG00000007937	SF3A1	97	92.765	ENSRNOG00000005218	Sf3a1	95	93.651	Rattus_norvegicus
ENSGALG00000007937	SF3A1	100	92.443	ENSRBIG00000032167	SF3A1	95	94.180	Rhinopithecus_bieti
ENSGALG00000007937	SF3A1	100	92.443	ENSRROG00000044908	SF3A1	95	94.180	Rhinopithecus_roxellana
ENSGALG00000007937	SF3A1	93	94.142	ENSSBOG00000021960	SF3A1	98	94.277	Saimiri_boliviensis_boliviensis
ENSGALG00000007937	SF3A1	98	90.617	ENSSHAG00000003666	SF3A1	96	92.185	Sarcophilus_harrisii
ENSGALG00000007937	SF3A1	100	83.061	ENSSFOG00015004579	sf3a1	96	85.545	Scleropages_formosus
ENSGALG00000007937	SF3A1	100	80.958	ENSSMAG00000004275	sf3a1	96	82.299	Scophthalmus_maximus
ENSGALG00000007937	SF3A1	100	83.859	ENSSDUG00000022219	sf3a1	96	84.676	Seriola_dumerili
ENSGALG00000007937	SF3A1	100	83.859	ENSSLDG00000012642	sf3a1	96	84.676	Seriola_lalandi_dorsalis
ENSGALG00000007937	SF3A1	97	90.980	ENSSARG00000005960	SF3A1	98	90.873	Sorex_araneus
ENSGALG00000007937	SF3A1	96	93.506	ENSSPUG00000018863	SF3A1	96	94.503	Sphenodon_punctatus
ENSGALG00000007937	SF3A1	100	84.257	ENSSPAG00000011856	sf3a1	96	85.205	Stegastes_partitus
ENSGALG00000007937	SF3A1	100	92.191	ENSSSCG00000010002	SF3A1	95	93.915	Sus_scrofa
ENSGALG00000007937	SF3A1	97	98.701	ENSTGUG00000010547	SF3A1	100	98.701	Taeniopygia_guttata
ENSGALG00000007937	SF3A1	100	81.337	ENSTRUG00000006118	sf3a1	96	82.034	Takifugu_rubripes
ENSGALG00000007937	SF3A1	61	84.701	ENSTNIG00000005713	sf3a1	89	84.956	Tetraodon_nigroviridis
ENSGALG00000007937	SF3A1	100	85.768	ENSTBEG00000012771	SF3A1	95	87.302	Tupaia_belangeri
ENSGALG00000007937	SF3A1	100	91.824	ENSTTRG00000001535	SF3A1	95	93.395	Tursiops_truncatus
ENSGALG00000007937	SF3A1	99	91.497	ENSUAMG00000006750	SF3A1	94	93.333	Ursus_americanus
ENSGALG00000007937	SF3A1	98	93.161	ENSUMAG00000016665	SF3A1	96	94.048	Ursus_maritimus
ENSGALG00000007937	SF3A1	100	92.443	ENSVVUG00000003075	SF3A1	95	94.180	Vulpes_vulpes
ENSGALG00000007937	SF3A1	100	85.283	ENSXETG00000016144	sf3a1	95	87.020	Xenopus_tropicalis
ENSGALG00000007937	SF3A1	100	82.058	ENSXCOG00000015653	sf3a1	96	83.487	Xiphophorus_couchianus
ENSGALG00000007937	SF3A1	100	82.183	ENSXMAG00000002753	sf3a1	96	83.620	Xiphophorus_maculatus