EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000008038 (Gene tree)
Gene ID: 424056
Gene Symbol: SF3B1
Alias: Hsh155|PRPF10|Prp10|SAP155|SF3b155
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 20161 bases
Position: chr7:10184959-10205119
Accession: 424056
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000013029	SF3b1	PF08920.10	6.7e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000013044	SF3B1-201	4258	XM_421912	ENSGALP00000013029	1301 (aa)	XP_421912	E1C2C3

Gene Model

Click here to download ENSGALG00000008038's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000008038's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000008038	SF3B1	100	99.387	ENSG00000115524	SF3B1	100	99.387	Homo_sapiens
ENSGALG00000008038	SF3B1	100	93.840	ENSAPOG00000011894	sf3b1	100	93.840	Acanthochromis_polyacanthus
ENSGALG00000008038	SF3B1	99	99.306	ENSAMEG00000013809	SF3B1	99	99.306	Ailuropoda_melanoleuca
ENSGALG00000008038	SF3B1	100	93.282	ENSACIG00000020910	sf3b1	97	93.282	Amphilophus_citrinellus
ENSGALG00000008038	SF3B1	100	93.840	ENSAOCG00000004478	sf3b1	100	93.840	Amphiprion_ocellaris
ENSGALG00000008038	SF3B1	100	93.840	ENSAPEG00000012937	sf3b1	100	93.840	Amphiprion_percula
ENSGALG00000008038	SF3B1	100	93.988	ENSATEG00000020435	sf3b1	100	93.988	Anabas_testudineus
ENSGALG00000008038	SF3B1	99	100.000	ENSAPLG00000003993	SF3B1	99	100.000	Anas_platyrhynchos
ENSGALG00000008038	SF3B1	100	99.002	ENSACAG00000009612	SF3B1	100	99.002	Anolis_carolinensis
ENSGALG00000008038	SF3B1	100	99.387	ENSANAG00000021577	SF3B1	100	99.741	Aotus_nancymaae
ENSGALG00000008038	SF3B1	100	92.922	ENSACLG00000023470	sf3b1	100	92.922	Astatotilapia_calliptera
ENSGALG00000008038	SF3B1	100	94.144	ENSAMXG00000002219	sf3b1	100	94.144	Astyanax_mexicanus
ENSGALG00000008038	SF3B1	100	99.310	ENSBTAG00000008915	SF3B1	100	99.310	Bos_taurus
ENSGALG00000008038	SF3B1	98	66.642	WBGene00011605	sftb-1	98	66.717	Caenorhabditis_elegans
ENSGALG00000008038	SF3B1	100	99.387	ENSCJAG00000003902	SF3B1	100	99.387	Callithrix_jacchus
ENSGALG00000008038	SF3B1	100	99.387	ENSCAFG00000010826	SF3B1	100	99.387	Canis_familiaris
ENSGALG00000008038	SF3B1	100	99.387	ENSCAFG00020004750	SF3B1	100	99.387	Canis_lupus_dingo
ENSGALG00000008038	SF3B1	100	99.310	ENSCHIG00000015226	SF3B1	100	99.310	Capra_hircus
ENSGALG00000008038	SF3B1	100	99.310	ENSTSYG00000009214	SF3B1	100	99.310	Carlito_syrichta
ENSGALG00000008038	SF3B1	99	99.231	ENSCAPG00000006547	SF3B1	99	99.231	Cavia_aperea
ENSGALG00000008038	SF3B1	99	99.382	ENSCPOG00000009353	SF3B1	100	99.382	Cavia_porcellus
ENSGALG00000008038	SF3B1	100	99.387	ENSCCAG00000020506	SF3B1	100	99.387	Cebus_capucinus
ENSGALG00000008038	SF3B1	100	99.387	ENSCATG00000035735	SF3B1	100	99.387	Cercocebus_atys
ENSGALG00000008038	SF3B1	99	99.382	ENSCLAG00000014767	SF3B1	99	99.382	Chinchilla_lanigera
ENSGALG00000008038	SF3B1	100	99.387	ENSCSAG00000011505	SF3B1	100	99.387	Chlorocebus_sabaeus
ENSGALG00000008038	SF3B1	76	96.923	ENSCHOG00000009860	SF3B1	76	96.923	Choloepus_hoffmanni
ENSGALG00000008038	SF3B1	100	99.539	ENSCPBG00000021902	SF3B1	100	99.660	Chrysemys_picta_bellii
ENSGALG00000008038	SF3B1	68	78.084	ENSCING00000002558	-	100	78.414	Ciona_intestinalis
ENSGALG00000008038	SF3B1	99	79.757	ENSCSAVG00000002559	-	99	79.606	Ciona_savignyi
ENSGALG00000008038	SF3B1	100	99.387	ENSCANG00000029415	SF3B1	100	99.387	Colobus_angolensis_palliatus
ENSGALG00000008038	SF3B1	100	99.387	ENSCGRG00001016990	Sf3b1	100	99.387	Cricetulus_griseus_chok1gshd
ENSGALG00000008038	SF3B1	100	99.387	ENSCGRG00000005301	Sf3b1	100	99.387	Cricetulus_griseus_crigri
ENSGALG00000008038	SF3B1	100	90.153	ENSCSEG00000003860	sf3b1	100	90.153	Cynoglossus_semilaevis
ENSGALG00000008038	SF3B1	96	93.983	ENSCVAG00000003680	sf3b1	99	93.983	Cyprinodon_variegatus
ENSGALG00000008038	SF3B1	100	93.688	ENSDARG00000056138	sf3b1	100	93.688	Danio_rerio
ENSGALG00000008038	SF3B1	100	99.310	ENSDNOG00000011754	SF3B1	100	99.310	Dasypus_novemcinctus
ENSGALG00000008038	SF3B1	99	96.909	ENSDORG00000002399	Sf3b1	100	96.909	Dipodomys_ordii
ENSGALG00000008038	SF3B1	100	76.583	FBgn0031266	Sf3b1	100	76.583	Drosophila_melanogaster
ENSGALG00000008038	SF3B1	83	98.701	ENSETEG00000009188	SF3B1	100	98.701	Echinops_telfairi
ENSGALG00000008038	SF3B1	99	87.692	ENSEBUG00000004325	sf3b1	100	90.174	Eptatretus_burgeri
ENSGALG00000008038	SF3B1	100	99.387	ENSEASG00005020159	SF3B1	98	99.387	Equus_asinus_asinus
ENSGALG00000008038	SF3B1	100	99.387	ENSECAG00000021657	SF3B1	98	99.387	Equus_caballus
ENSGALG00000008038	SF3B1	87	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSGALG00000008038	SF3B1	100	92.825	ENSELUG00000005977	sf3b1	98	93.051	Esox_lucius
ENSGALG00000008038	SF3B1	100	99.387	ENSFCAG00000005038	SF3B1	100	99.387	Felis_catus
ENSGALG00000008038	SF3B1	99	99.923	ENSFALG00000004281	SF3B1	99	99.923	Ficedula_albicollis
ENSGALG00000008038	SF3B1	100	99.387	ENSFDAG00000017510	SF3B1	100	99.387	Fukomys_damarensis
ENSGALG00000008038	SF3B1	100	93.004	ENSFHEG00000014333	sf3b1	100	93.004	Fundulus_heteroclitus
ENSGALG00000008038	SF3B1	100	93.521	ENSGMOG00000006773	sf3b1	100	93.521	Gadus_morhua
ENSGALG00000008038	SF3B1	98	94.315	ENSGAFG00000000704	sf3b1	99	94.315	Gambusia_affinis
ENSGALG00000008038	SF3B1	100	93.064	ENSGACG00000008839	sf3b1	100	93.521	Gasterosteus_aculeatus
ENSGALG00000008038	SF3B1	100	98.855	ENSGAGG00000017478	SF3B1	100	98.855	Gopherus_agassizii
ENSGALG00000008038	SF3B1	99	92.556	ENSGGOG00000009264	SF3B1	99	93.764	Gorilla_gorilla
ENSGALG00000008038	SF3B1	99	92.988	ENSHBUG00000007705	sf3b1	99	92.988	Haplochromis_burtoni
ENSGALG00000008038	SF3B1	99	99.382	ENSHGLG00000008285	-	99	99.382	Heterocephalus_glaber_female
ENSGALG00000008038	SF3B1	99	97.375	ENSHGLG00100005535	-	99	97.375	Heterocephalus_glaber_male
ENSGALG00000008038	SF3B1	100	92.965	ENSHCOG00000016775	sf3b1	100	93.041	Hippocampus_comes
ENSGALG00000008038	SF3B1	100	94.140	ENSIPUG00000013171	sf3b1	100	94.140	Ictalurus_punctatus
ENSGALG00000008038	SF3B1	100	99.387	ENSSTOG00000011034	SF3B1	100	99.387	Ictidomys_tridecemlineatus
ENSGALG00000008038	SF3B1	99	99.302	ENSJJAG00000010903	Sf3b1	99	99.302	Jaculus_jaculus
ENSGALG00000008038	SF3B1	100	93.096	ENSKMAG00000004009	sf3b1	100	93.171	Kryptolebias_marmoratus
ENSGALG00000008038	SF3B1	100	93.654	ENSLBEG00000022208	sf3b1	100	93.654	Labrus_bergylta
ENSGALG00000008038	SF3B1	99	92.715	ENSLACG00000014832	SF3B1	99	92.715	Latimeria_chalumnae
ENSGALG00000008038	SF3B1	100	94.913	ENSLOCG00000003899	sf3b1	100	94.913	Lepisosteus_oculatus
ENSGALG00000008038	SF3B1	100	99.387	ENSLAFG00000001956	SF3B1	100	99.387	Loxodonta_africana
ENSGALG00000008038	SF3B1	99	99.382	ENSMMUG00000022430	SF3B1	99	99.382	Macaca_mulatta
ENSGALG00000008038	SF3B1	100	99.387	ENSMNEG00000042333	SF3B1	100	99.741	Macaca_nemestrina
ENSGALG00000008038	SF3B1	94	93.176	ENSMLEG00000026141	SF3B1	99	93.468	Mandrillus_leucophaeus
ENSGALG00000008038	SF3B1	100	93.988	ENSMAMG00000010241	sf3b1	100	93.988	Mastacembelus_armatus
ENSGALG00000008038	SF3B1	100	92.922	ENSMZEG00005021254	sf3b1	100	92.922	Maylandia_zebra
ENSGALG00000008038	SF3B1	99	99.381	ENSMGAG00000007017	SF3B1	99	99.381	Meleagris_gallopavo
ENSGALG00000008038	SF3B1	99	94.981	ENSMAUG00000009071	Sf3b1	99	95.135	Mesocricetus_auratus
ENSGALG00000008038	SF3B1	100	99.310	ENSMICG00000013879	SF3B1	100	99.310	Microcebus_murinus
ENSGALG00000008038	SF3B1	99	94.907	ENSMOCG00000000455	Sf3b1	99	94.907	Microtus_ochrogaster
ENSGALG00000008038	SF3B1	83	93.321	ENSMMOG00000000475	sf3b1	100	93.321	Mola_mola
ENSGALG00000008038	SF3B1	100	99.002	ENSMODG00000012275	SF3B1	100	99.002	Monodelphis_domestica
ENSGALG00000008038	SF3B1	100	93.912	ENSMALG00000017211	sf3b1	100	93.912	Monopterus_albus
ENSGALG00000008038	SF3B1	100	99.387	MGP_CAROLIEiJ_G0014141	Sf3b1	100	99.387	Mus_caroli
ENSGALG00000008038	SF3B1	100	99.387	ENSMUSG00000025982	Sf3b1	100	99.387	Mus_musculus
ENSGALG00000008038	SF3B1	100	99.387	MGP_SPRETEiJ_G0014947	Sf3b1	100	99.387	Mus_spretus
ENSGALG00000008038	SF3B1	100	99.387	ENSMPUG00000007799	SF3B1	100	99.387	Mustela_putorius_furo
ENSGALG00000008038	SF3B1	100	98.160	ENSMLUG00000000840	SF3B1	100	98.160	Myotis_lucifugus
ENSGALG00000008038	SF3B1	99	99.077	ENSNGAG00000021884	-	100	99.077	Nannospalax_galili
ENSGALG00000008038	SF3B1	100	89.169	ENSNBRG00000015816	sf3b1	100	89.169	Neolamprologus_brichardi
ENSGALG00000008038	SF3B1	100	99.387	ENSNLEG00000006861	SF3B1	100	99.387	Nomascus_leucogenys
ENSGALG00000008038	SF3B1	70	100.000	ENSMEUG00000015848	-	67	100.000	Notamacropus_eugenii
ENSGALG00000008038	SF3B1	100	86.333	ENSOPRG00000008596	SF3B1	100	86.333	Ochotona_princeps
ENSGALG00000008038	SF3B1	100	99.387	ENSODEG00000011153	-	100	99.387	Octodon_degus
ENSGALG00000008038	SF3B1	100	92.922	ENSONIG00000013758	sf3b1	100	92.922	Oreochromis_niloticus
ENSGALG00000008038	SF3B1	83	98.801	ENSOCUG00000012722	-	96	98.801	Oryctolagus_cuniculus
ENSGALG00000008038	SF3B1	100	93.455	ENSORLG00000020219	sf3b1	100	93.455	Oryzias_latipes
ENSGALG00000008038	SF3B1	100	93.455	ENSORLG00020001746	sf3b1	100	93.455	Oryzias_latipes_hni
ENSGALG00000008038	SF3B1	64	91.169	ENSORLG00015001759	sf3b1	98	91.169	Oryzias_latipes_hsok
ENSGALG00000008038	SF3B1	100	93.612	ENSOMEG00000019231	sf3b1	100	93.612	Oryzias_melastigma
ENSGALG00000008038	SF3B1	100	99.310	ENSOARG00000015374	SF3B1	100	99.310	Ovis_aries
ENSGALG00000008038	SF3B1	100	99.387	ENSPPAG00000035007	SF3B1	100	99.387	Pan_paniscus
ENSGALG00000008038	SF3B1	100	99.387	ENSPPRG00000009090	SF3B1	100	99.387	Panthera_pardus
ENSGALG00000008038	SF3B1	100	99.387	ENSPTIG00000021557	SF3B1	100	99.387	Panthera_tigris_altaica
ENSGALG00000008038	SF3B1	99	90.685	ENSPTRG00000012771	SF3B1	99	90.839	Pan_troglodytes
ENSGALG00000008038	SF3B1	100	99.387	ENSPANG00000013417	SF3B1	100	99.387	Papio_anubis
ENSGALG00000008038	SF3B1	100	95.050	ENSPKIG00000000784	sf3b1	100	95.050	Paramormyrops_kingsleyae
ENSGALG00000008038	SF3B1	99	98.296	ENSPSIG00000017222	SF3B1	98	98.296	Pelodiscus_sinensis
ENSGALG00000008038	SF3B1	90	94.177	ENSPMGG00000004330	sf3b1	99	94.177	Periophthalmus_magnuspinnatus
ENSGALG00000008038	SF3B1	99	99.382	ENSPEMG00000010699	Sf3b1	100	99.382	Peromyscus_maniculatus_bairdii
ENSGALG00000008038	SF3B1	100	90.183	ENSPMAG00000001311	sf3b1	100	90.335	Petromyzon_marinus
ENSGALG00000008038	SF3B1	100	98.926	ENSPCIG00000010642	SF3B1	100	98.926	Phascolarctos_cinereus
ENSGALG00000008038	SF3B1	100	93.693	ENSPFOG00000000073	sf3b1	100	93.693	Poecilia_formosa
ENSGALG00000008038	SF3B1	100	93.764	ENSPLAG00000002293	sf3b1	100	93.764	Poecilia_latipinna
ENSGALG00000008038	SF3B1	100	93.764	ENSPMEG00000000446	sf3b1	98	93.764	Poecilia_mexicana
ENSGALG00000008038	SF3B1	100	93.840	ENSPREG00000019652	sf3b1	100	93.840	Poecilia_reticulata
ENSGALG00000008038	SF3B1	100	98.631	ENSPPYG00000013044	SF3B1	96	98.631	Pongo_abelii
ENSGALG00000008038	SF3B1	100	99.233	ENSPCAG00000009292	SF3B1	100	99.233	Procavia_capensis
ENSGALG00000008038	SF3B1	100	99.310	ENSPCOG00000024074	SF3B1	100	99.310	Propithecus_coquereli
ENSGALG00000008038	SF3B1	100	99.387	ENSPVAG00000008302	SF3B1	100	99.387	Pteropus_vampyrus
ENSGALG00000008038	SF3B1	100	92.846	ENSPNYG00000014939	sf3b1	100	92.846	Pundamilia_nyererei
ENSGALG00000008038	SF3B1	100	94.068	ENSPNAG00000008288	sf3b1	100	94.144	Pygocentrus_nattereri
ENSGALG00000008038	SF3B1	100	99.387	ENSRNOG00000013516	Sf3b1	100	99.387	Rattus_norvegicus
ENSGALG00000008038	SF3B1	99	95.622	ENSRBIG00000026096	SF3B1	100	95.622	Rhinopithecus_bieti
ENSGALG00000008038	SF3B1	100	99.387	ENSRROG00000031308	SF3B1	100	99.387	Rhinopithecus_roxellana
ENSGALG00000008038	SF3B1	100	99.387	ENSSBOG00000020080	SF3B1	100	99.387	Saimiri_boliviensis_boliviensis
ENSGALG00000008038	SF3B1	100	99.002	ENSSHAG00000017564	SF3B1	100	99.002	Sarcophilus_harrisii
ENSGALG00000008038	SF3B1	100	94.829	ENSSFOG00015021535	sf3b1	100	94.981	Scleropages_formosus
ENSGALG00000008038	SF3B1	99	93.020	ENSSMAG00000013977	sf3b1	99	93.096	Scophthalmus_maximus
ENSGALG00000008038	SF3B1	100	93.760	ENSSDUG00000017422	sf3b1	100	93.760	Seriola_dumerili
ENSGALG00000008038	SF3B1	100	93.683	ENSSLDG00000019495	sf3b1	100	93.683	Seriola_lalandi_dorsalis
ENSGALG00000008038	SF3B1	76	99.824	ENSSARG00000007016	SF3B1	76	99.824	Sorex_araneus
ENSGALG00000008038	SF3B1	100	99.385	ENSSPUG00000000410	SF3B1	100	99.385	Sphenodon_punctatus
ENSGALG00000008038	SF3B1	100	93.912	ENSSPAG00000010451	sf3b1	99	93.912	Stegastes_partitus
ENSGALG00000008038	SF3B1	91	98.991	ENSSSCG00000016075	SF3B1	100	99.741	Sus_scrofa
ENSGALG00000008038	SF3B1	100	99.923	ENSTGUG00000010553	SF3B1	100	99.923	Taeniopygia_guttata
ENSGALG00000008038	SF3B1	100	93.531	ENSTRUG00000015534	sf3b1	100	93.531	Takifugu_rubripes
ENSGALG00000008038	SF3B1	88	99.690	ENSTBEG00000008714	SF3B1	93	99.690	Tupaia_belangeri
ENSGALG00000008038	SF3B1	92	94.058	ENSTTRG00000003414	SF3B1	92	94.058	Tursiops_truncatus
ENSGALG00000008038	SF3B1	94	94.196	ENSUAMG00000018506	SF3B1	99	98.988	Ursus_americanus
ENSGALG00000008038	SF3B1	100	99.387	ENSUMAG00000020945	SF3B1	100	99.387	Ursus_maritimus
ENSGALG00000008038	SF3B1	96	97.297	ENSVPAG00000005798	SF3B1	96	97.297	Vicugna_pacos
ENSGALG00000008038	SF3B1	100	99.387	ENSVVUG00000025948	SF3B1	95	99.387	Vulpes_vulpes
ENSGALG00000008038	SF3B1	100	96.626	ENSXETG00000013339	sf3b1	100	96.626	Xenopus_tropicalis
ENSGALG00000008038	SF3B1	100	90.276	ENSXCOG00000018086	sf3b1	100	90.160	Xiphophorus_couchianus
ENSGALG00000008038	SF3B1	100	93.764	ENSXMAG00000007369	sf3b1	100	93.991	Xiphophorus_maculatus