EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000008097 (Gene tree)
Gene ID: 373923
Gene Symbol: CELF1
Alias: CUGBP1
Full Name: Gallus gallus CUGBP Elav-like family member 1 (CELF1)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 52472 bases
Position: chr5:23040708-23093179
Accession: NM_001012521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000013128	RRM_1	PF00076.22	1.8e-51	1	3
ENSGALP00000013128	RRM_1	PF00076.22	1.8e-51	2	3
ENSGALP00000013128	RRM_1	PF00076.22	1.8e-51	3	3
ENSGALP00000073568	RRM_1	PF00076.22	1.8e-51	1	3
ENSGALP00000073568	RRM_1	PF00076.22	1.8e-51	2	3
ENSGALP00000073568	RRM_1	PF00076.22	1.8e-51	3	3
ENSGALP00000066083	RRM_1	PF00076.22	2.3e-51	1	3
ENSGALP00000066083	RRM_1	PF00076.22	2.3e-51	2	3
ENSGALP00000066083	RRM_1	PF00076.22	2.3e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000013143	-	4507	-	ENSGALP00000013128	485 (aa)	-	F1ND14
ENSGALT00000101042	-	1580	-	ENSGALP00000066083	512 (aa)	-	UPI000350C089
ENSGALT00000101728	-	2907	-	ENSGALP00000073568	485 (aa)	-	UPI0000ECB95B

Gene Model

Click here to download ENSGALG00000008097's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000008097's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000008097	CELF1	100	96.701	ENSG00000149187	CELF1	100	97.436	Homo_sapiens
ENSGALG00000008097	CELF1	100	84.929	ENSAPOG00000024000	celf1	100	84.929	Acanthochromis_polyacanthus
ENSGALG00000008097	CELF1	100	96.124	ENSAMEG00000007596	CELF1	100	96.124	Ailuropoda_melanoleuca
ENSGALG00000008097	CELF1	100	83.951	ENSACIG00000023843	celf1	100	82.922	Amphilophus_citrinellus
ENSGALG00000008097	CELF1	100	84.929	ENSAOCG00000001252	celf1	100	84.929	Amphiprion_ocellaris
ENSGALG00000008097	CELF1	100	85.132	ENSAPEG00000002340	celf1	100	85.010	Amphiprion_percula
ENSGALG00000008097	CELF1	100	82.922	ENSATEG00000010871	celf1	100	82.305	Anabas_testudineus
ENSGALG00000008097	CELF1	100	98.144	ENSACAG00000002114	CELF1	100	97.852	Anolis_carolinensis
ENSGALG00000008097	CELF1	100	95.736	ENSANAG00000031770	CELF1	100	95.736	Aotus_nancymaae
ENSGALG00000008097	CELF1	100	84.405	ENSACLG00000010181	-	100	84.795	Astatotilapia_calliptera
ENSGALG00000008097	CELF1	100	84.861	ENSAMXG00000020576	celf1	96	82.917	Astyanax_mexicanus
ENSGALG00000008097	CELF1	100	95.543	ENSBTAG00000002520	CELF1	100	95.543	Bos_taurus
ENSGALG00000008097	CELF1	100	95.930	ENSCJAG00000020133	CELF1	100	95.930	Callithrix_jacchus
ENSGALG00000008097	CELF1	100	96.124	ENSCAFG00000008452	CELF1	100	96.124	Canis_familiaris
ENSGALG00000008097	CELF1	100	96.124	ENSCAFG00020025487	CELF1	100	96.124	Canis_lupus_dingo
ENSGALG00000008097	CELF1	100	96.124	ENSCHIG00000024582	CELF1	100	96.124	Capra_hircus
ENSGALG00000008097	CELF1	100	95.706	ENSTSYG00000003866	CELF1	100	95.706	Carlito_syrichta
ENSGALG00000008097	CELF1	99	69.647	ENSCAPG00000006787	CELF1	100	68.279	Cavia_aperea
ENSGALG00000008097	CELF1	100	96.115	ENSCPOG00000036381	CELF1	100	96.115	Cavia_porcellus
ENSGALG00000008097	CELF1	100	95.930	ENSCCAG00000033487	CELF1	100	95.930	Cebus_capucinus
ENSGALG00000008097	CELF1	100	95.910	ENSCATG00000040143	CELF1	100	95.910	Cercocebus_atys
ENSGALG00000008097	CELF1	100	95.706	ENSCLAG00000011791	CELF1	100	95.543	Chinchilla_lanigera
ENSGALG00000008097	CELF1	100	95.543	ENSCSAG00000005786	CELF1	100	95.543	Chlorocebus_sabaeus
ENSGALG00000008097	CELF1	62	100.000	ENSCHOG00000004196	-	68	100.000	Choloepus_hoffmanni
ENSGALG00000008097	CELF1	100	99.609	ENSCPBG00000022914	CELF1	100	99.609	Chrysemys_picta_bellii
ENSGALG00000008097	CELF1	100	96.701	ENSCANG00000032689	CELF1	100	96.701	Colobus_angolensis_palliatus
ENSGALG00000008097	CELF1	100	93.580	ENSCGRG00001011274	Celf1	100	94.961	Cricetulus_griseus_chok1gshd
ENSGALG00000008097	CELF1	100	93.580	ENSCGRG00000015357	Celf1	100	94.961	Cricetulus_griseus_crigri
ENSGALG00000008097	CELF1	100	75.926	ENSCSEG00000008675	celf1	100	74.280	Cynoglossus_semilaevis
ENSGALG00000008097	CELF1	100	84.692	ENSDARG00000005315	celf1	100	89.349	Danio_rerio
ENSGALG00000008097	CELF1	100	95.910	ENSDNOG00000009523	CELF1	100	95.910	Dasypus_novemcinctus
ENSGALG00000008097	CELF1	100	86.392	ENSDORG00000013721	Celf1	100	86.719	Dipodomys_ordii
ENSGALG00000008097	CELF1	73	97.674	ENSETEG00000004507	CELF1	83	97.674	Echinops_telfairi
ENSGALG00000008097	CELF1	100	88.911	ENSEASG00005010831	CELF1	100	89.147	Equus_asinus_asinus
ENSGALG00000008097	CELF1	100	96.907	ENSECAG00000007741	CELF1	100	96.907	Equus_caballus
ENSGALG00000008097	CELF1	100	78.439	ENSEEUG00000009782	CELF1	100	78.850	Erinaceus_europaeus
ENSGALG00000008097	CELF1	100	84.861	ENSELUG00000023173	celf1	100	85.597	Esox_lucius
ENSGALG00000008097	CELF1	100	96.124	ENSFCAG00000002535	CELF1	100	96.124	Felis_catus
ENSGALG00000008097	CELF1	100	99.609	ENSFALG00000006402	CELF1	100	99.609	Ficedula_albicollis
ENSGALG00000008097	CELF1	100	95.706	ENSFDAG00000008517	CELF1	100	95.706	Fukomys_damarensis
ENSGALG00000008097	CELF1	100	85.041	ENSGMOG00000012783	celf1	99	85.102	Gadus_morhua
ENSGALG00000008097	CELF1	100	79.482	ENSGACG00000014226	celf1	95	79.960	Gasterosteus_aculeatus
ENSGALG00000008097	CELF1	100	99.381	ENSGAGG00000011562	CELF1	100	99.381	Gopherus_agassizii
ENSGALG00000008097	CELF1	100	95.930	ENSGGOG00000004106	CELF1	100	95.930	Gorilla_gorilla
ENSGALG00000008097	CELF1	100	84.405	ENSHBUG00000017881	celf1	100	84.795	Haplochromis_burtoni
ENSGALG00000008097	CELF1	100	88.889	ENSHGLG00000019214	-	100	88.889	Heterocephalus_glaber_female
ENSGALG00000008097	CELF1	100	95.706	ENSHGLG00000006909	-	100	95.706	Heterocephalus_glaber_female
ENSGALG00000008097	CELF1	100	95.706	ENSHGLG00100013863	-	100	95.706	Heterocephalus_glaber_male
ENSGALG00000008097	CELF1	100	91.152	ENSHGLG00100017423	-	100	91.564	Heterocephalus_glaber_male
ENSGALG00000008097	CELF1	100	83.984	ENSHCOG00000000258	celf1	100	83.778	Hippocampus_comes
ENSGALG00000008097	CELF1	100	84.095	ENSIPUG00000023708	celf1	100	83.499	Ictalurus_punctatus
ENSGALG00000008097	CELF1	100	95.910	ENSSTOG00000000613	CELF1	100	95.910	Ictidomys_tridecemlineatus
ENSGALG00000008097	CELF1	100	95.736	ENSJJAG00000020280	Celf1	100	95.736	Jaculus_jaculus
ENSGALG00000008097	CELF1	100	84.774	ENSLBEG00000018296	celf1	100	77.366	Labrus_bergylta
ENSGALG00000008097	CELF1	69	82.544	ENSLBEG00000002047	-	98	80.178	Labrus_bergylta
ENSGALG00000008097	CELF1	71	78.108	ENSLACG00000018990	CELF1	92	80.541	Latimeria_chalumnae
ENSGALG00000008097	CELF1	100	88.600	ENSLOCG00000005966	celf1	95	88.072	Lepisosteus_oculatus
ENSGALG00000008097	CELF1	100	95.706	ENSLAFG00000003484	CELF1	100	95.349	Loxodonta_africana
ENSGALG00000008097	CELF1	100	96.701	ENSMFAG00000003505	CELF1	100	96.701	Macaca_fascicularis
ENSGALG00000008097	CELF1	100	96.701	ENSMMUG00000011657	CELF1	99	96.715	Macaca_mulatta
ENSGALG00000008097	CELF1	100	96.701	ENSMNEG00000022558	CELF1	100	96.701	Macaca_nemestrina
ENSGALG00000008097	CELF1	100	96.701	ENSMLEG00000040834	CELF1	100	96.701	Mandrillus_leucophaeus
ENSGALG00000008097	CELF1	100	84.774	ENSMAMG00000010052	celf1	100	83.745	Mastacembelus_armatus
ENSGALG00000008097	CELF1	100	84.405	ENSMZEG00005018307	celf1	100	84.795	Maylandia_zebra
ENSGALG00000008097	CELF1	100	99.794	ENSMGAG00000010629	CELF1	98	97.804	Meleagris_gallopavo
ENSGALG00000008097	CELF1	100	95.072	ENSMAUG00000009468	Celf1	100	95.297	Mesocricetus_auratus
ENSGALG00000008097	CELF1	100	95.930	ENSMICG00000045113	CELF1	100	95.930	Microcebus_murinus
ENSGALG00000008097	CELF1	100	95.501	ENSMOCG00000012633	Celf1	100	95.501	Microtus_ochrogaster
ENSGALG00000008097	CELF1	100	84.362	ENSMMOG00000015460	celf1	95	84.016	Mola_mola
ENSGALG00000008097	CELF1	100	96.524	ENSMODG00000019913	CELF1	100	96.524	Monodelphis_domestica
ENSGALG00000008097	CELF1	100	96.289	MGP_CAROLIEiJ_G0023949	Celf1	100	96.289	Mus_caroli
ENSGALG00000008097	CELF1	100	96.289	ENSMUSG00000005506	Celf1	100	96.289	Mus_musculus
ENSGALG00000008097	CELF1	100	96.289	MGP_PahariEiJ_G0025385	Celf1	100	96.289	Mus_pahari
ENSGALG00000008097	CELF1	100	96.082	MGP_SPRETEiJ_G0024859	Celf1	100	96.082	Mus_spretus
ENSGALG00000008097	CELF1	100	96.124	ENSMPUG00000003960	CELF1	93	96.124	Mustela_putorius_furo
ENSGALG00000008097	CELF1	100	95.183	ENSMLUG00000016631	CELF1	100	95.183	Myotis_lucifugus
ENSGALG00000008097	CELF1	100	93.191	ENSNGAG00000017390	Celf1	100	93.217	Nannospalax_galili
ENSGALG00000008097	CELF1	99	55.785	ENSNBRG00000023547	-	85	55.785	Neolamprologus_brichardi
ENSGALG00000008097	CELF1	100	96.701	ENSNLEG00000014638	CELF1	100	96.701	Nomascus_leucogenys
ENSGALG00000008097	CELF1	100	96.524	ENSMEUG00000007763	CELF1	100	96.524	Notamacropus_eugenii
ENSGALG00000008097	CELF1	100	95.092	ENSOPRG00000003239	-	100	95.092	Ochotona_princeps
ENSGALG00000008097	CELF1	100	95.706	ENSODEG00000015204	CELF1	100	95.543	Octodon_degus
ENSGALG00000008097	CELF1	100	83.852	ENSONIG00000008300	celf1	100	84.241	Oreochromis_niloticus
ENSGALG00000008097	CELF1	100	96.933	ENSOANG00000007896	CELF1	99	96.512	Ornithorhynchus_anatinus
ENSGALG00000008097	CELF1	100	95.501	ENSOCUG00000001311	CELF1	100	95.155	Oryctolagus_cuniculus
ENSGALG00000008097	CELF1	100	80.123	ENSOMEG00000002381	celf1	100	80.328	Oryzias_melastigma
ENSGALG00000008097	CELF1	100	94.990	ENSOGAG00000011600	CELF1	100	94.990	Otolemur_garnettii
ENSGALG00000008097	CELF1	100	96.115	ENSOARG00000006924	CELF1	100	96.115	Ovis_aries
ENSGALG00000008097	CELF1	100	95.910	ENSPPAG00000033870	CELF1	100	95.910	Pan_paniscus
ENSGALG00000008097	CELF1	100	96.115	ENSPPRG00000002376	CELF1	100	96.115	Panthera_pardus
ENSGALG00000008097	CELF1	100	96.124	ENSPTIG00000003974	CELF1	100	96.124	Panthera_tigris_altaica
ENSGALG00000008097	CELF1	100	95.930	ENSPTRG00000052299	CELF1	100	95.930	Pan_troglodytes
ENSGALG00000008097	CELF1	100	95.930	ENSPANG00000021676	CELF1	100	95.930	Papio_anubis
ENSGALG00000008097	CELF1	100	89.095	ENSPKIG00000012324	celf1	100	89.095	Paramormyrops_kingsleyae
ENSGALG00000008097	CELF1	100	95.706	ENSPSIG00000003922	CELF1	100	95.543	Pelodiscus_sinensis
ENSGALG00000008097	CELF1	100	77.526	ENSPMGG00000013192	celf1	96	78.119	Periophthalmus_magnuspinnatus
ENSGALG00000008097	CELF1	100	95.501	ENSPEMG00000015644	Celf1	100	95.501	Peromyscus_maniculatus_bairdii
ENSGALG00000008097	CELF1	100	96.524	ENSPCIG00000022947	CELF1	100	96.634	Phascolarctos_cinereus
ENSGALG00000008097	CELF1	69	70.326	ENSPFOG00000000961	-	100	67.953	Poecilia_formosa
ENSGALG00000008097	CELF1	88	69.795	ENSPLAG00000019373	-	88	68.627	Poecilia_latipinna
ENSGALG00000008097	CELF1	100	74.333	ENSPREG00000022185	-	100	72.394	Poecilia_reticulata
ENSGALG00000008097	CELF1	100	93.204	ENSPPYG00000003302	CELF1	100	94.584	Pongo_abelii
ENSGALG00000008097	CELF1	100	93.429	ENSPCAG00000002631	CELF1	100	93.456	Procavia_capensis
ENSGALG00000008097	CELF1	100	91.440	ENSPCOG00000021865	CELF1	100	91.667	Propithecus_coquereli
ENSGALG00000008097	CELF1	97	96.037	ENSPVAG00000007340	CELF1	100	96.037	Pteropus_vampyrus
ENSGALG00000008097	CELF1	78	74.481	ENSPNYG00000023719	-	88	72.404	Pundamilia_nyererei
ENSGALG00000008097	CELF1	100	85.288	ENSPNAG00000013418	celf1	96	83.525	Pygocentrus_nattereri
ENSGALG00000008097	CELF1	100	95.072	ENSRNOG00000010379	Celf1	100	95.297	Rattus_norvegicus
ENSGALG00000008097	CELF1	100	95.930	ENSRBIG00000042406	CELF1	100	95.930	Rhinopithecus_bieti
ENSGALG00000008097	CELF1	100	95.736	ENSRROG00000032588	CELF1	100	95.736	Rhinopithecus_roxellana
ENSGALG00000008097	CELF1	100	86.914	ENSSBOG00000021912	CELF1	100	86.914	Saimiri_boliviensis_boliviensis
ENSGALG00000008097	CELF1	100	96.933	ENSSHAG00000017438	CELF1	100	96.933	Sarcophilus_harrisii
ENSGALG00000008097	CELF1	100	90.329	ENSSFOG00015019353	celf1	97	87.968	Scleropages_formosus
ENSGALG00000008097	CELF1	100	85.010	ENSSMAG00000013827	celf1	100	79.532	Scophthalmus_maximus
ENSGALG00000008097	CELF1	100	84.394	ENSSDUG00000011558	celf1	96	82.806	Seriola_dumerili
ENSGALG00000008097	CELF1	100	84.825	ENSSLDG00000012863	celf1	100	85.214	Seriola_lalandi_dorsalis
ENSGALG00000008097	CELF1	100	89.322	ENSSARG00000003207	CELF1	100	89.366	Sorex_araneus
ENSGALG00000008097	CELF1	100	98.450	ENSSPUG00000004228	CELF1	100	98.450	Sphenodon_punctatus
ENSGALG00000008097	CELF1	100	84.521	ENSSPAG00000009569	celf1	100	84.521	Stegastes_partitus
ENSGALG00000008097	CELF1	100	96.124	ENSSSCG00000013233	CELF1	100	96.124	Sus_scrofa
ENSGALG00000008097	CELF1	100	98.569	ENSTGUG00000010377	CELF1	100	98.450	Taeniopygia_guttata
ENSGALG00000008097	CELF1	100	65.369	ENSTRUG00000000617	celf1	100	65.574	Takifugu_rubripes
ENSGALG00000008097	CELF1	83	98.013	ENSTBEG00000005140	CELF1	80	98.519	Tupaia_belangeri
ENSGALG00000008097	CELF1	100	96.115	ENSTTRG00000014157	CELF1	100	96.115	Tursiops_truncatus
ENSGALG00000008097	CELF1	90	95.708	ENSUAMG00000000223	CELF1	100	95.708	Ursus_americanus
ENSGALG00000008097	CELF1	100	96.124	ENSUMAG00000009218	CELF1	100	96.124	Ursus_maritimus
ENSGALG00000008097	CELF1	100	81.314	ENSVPAG00000000336	CELF1	100	82.822	Vicugna_pacos
ENSGALG00000008097	CELF1	100	96.124	ENSVVUG00000023439	CELF1	100	96.124	Vulpes_vulpes
ENSGALG00000008097	CELF1	100	88.485	ENSXETG00000009044	celf1	100	87.071	Xenopus_tropicalis
ENSGALG00000008097	CELF1	87	59.172	ENSXCOG00000017706	-	87	59.412	Xiphophorus_couchianus
ENSGALG00000008097	CELF1	100	73.251	ENSXMAG00000029339	-	100	72.222	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006376	mRNA splice site selection	21873635.	IBA	Process
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component