EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000008256 (Gene tree)
Gene ID: 415577
Gene Symbol: BLM
Alias: ORF1
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 16842 bases
Position: chr10:20347261-20364102
Accession: 1058
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000013422	HRDC	PF00570.23	1.8e-12	1	1
ENSGALP00000013422	BDHCT	PF08072.11	4.6e-21	1	1
ENSGALP00000013422	DEAD	PF00270.29	7.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000013437	BLM-201	5184	-	ENSGALP00000013422	1380 (aa)	-	F1P3V1

Gene Model

Click here to download ENSGALG00000008256's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03440	Homologous recombination	KEGG
gga03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000008256's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000008256	BLM	99	50.204	ENSG00000197299	BLM	99	50.441	Homo_sapiens
ENSGALG00000008256	BLM	83	51.677	ENSAPOG00000017966	blm	83	51.624	Acanthochromis_polyacanthus
ENSGALG00000008256	BLM	86	69.073	ENSAMEG00000013843	BLM	99	51.973	Ailuropoda_melanoleuca
ENSGALG00000008256	BLM	83	51.291	ENSACIG00000023762	blm	78	51.680	Amphilophus_citrinellus
ENSGALG00000008256	BLM	58	63.951	ENSAPEG00000018105	blm	79	52.524	Amphiprion_percula
ENSGALG00000008256	BLM	58	63.670	ENSATEG00000006421	blm	82	51.902	Anabas_testudineus
ENSGALG00000008256	BLM	85	80.537	ENSAPLG00000006878	BLM	99	80.453	Anas_platyrhynchos
ENSGALG00000008256	BLM	72	72.460	ENSACAG00000014275	BLM	80	58.644	Anolis_carolinensis
ENSGALG00000008256	BLM	87	68.028	ENSANAG00000038415	BLM	99	50.810	Aotus_nancymaae
ENSGALG00000008256	BLM	100	46.524	ENSACLG00000020354	blm	83	51.639	Astatotilapia_calliptera
ENSGALG00000008256	BLM	83	64.937	ENSAMXG00000016970	blm	80	51.892	Astyanax_mexicanus
ENSGALG00000008256	BLM	92	58.416	ENSBTAG00000020301	BLM	99	58.033	Bos_taurus
ENSGALG00000008256	BLM	85	68.937	ENSCJAG00000009803	BLM	99	50.101	Callithrix_jacchus
ENSGALG00000008256	BLM	57	71.574	ENSCAFG00000012385	BLM	80	57.289	Canis_familiaris
ENSGALG00000008256	BLM	57	71.701	ENSCAFG00020016111	BLM	92	75.000	Canis_lupus_dingo
ENSGALG00000008256	BLM	92	58.416	ENSCHIG00000010329	BLM	99	57.860	Capra_hircus
ENSGALG00000008256	BLM	87	67.678	ENSTSYG00000012368	BLM	81	57.083	Carlito_syrichta
ENSGALG00000008256	BLM	78	73.077	ENSCAPG00000017976	BLM	84	66.284	Cavia_aperea
ENSGALG00000008256	BLM	99	49.423	ENSCPOG00000001761	BLM	83	54.671	Cavia_porcellus
ENSGALG00000008256	BLM	85	68.937	ENSCCAG00000023069	BLM	99	50.639	Cebus_capucinus
ENSGALG00000008256	BLM	99	50.602	ENSCATG00000040609	BLM	77	79.233	Cercocebus_atys
ENSGALG00000008256	BLM	99	49.591	ENSCLAG00000012111	BLM	99	50.103	Chinchilla_lanigera
ENSGALG00000008256	BLM	99	51.120	ENSCSAG00000017040	BLM	99	51.116	Chlorocebus_sabaeus
ENSGALG00000008256	BLM	83	60.208	ENSCHOG00000006255	BLM	82	60.083	Choloepus_hoffmanni
ENSGALG00000008256	BLM	92	62.625	ENSCPBG00000025000	BLM	99	65.939	Chrysemys_picta_bellii
ENSGALG00000008256	BLM	84	72.778	ENSCANG00000034808	BLM	100	72.778	Colobus_angolensis_palliatus
ENSGALG00000008256	BLM	99	50.541	ENSCGRG00001024897	Blm	80	56.998	Cricetulus_griseus_chok1gshd
ENSGALG00000008256	BLM	67	42.999	ENSCGRG00000016261	Blm	68	50.556	Cricetulus_griseus_crigri
ENSGALG00000008256	BLM	60	62.515	ENSCSEG00000013483	blm	84	52.151	Cynoglossus_semilaevis
ENSGALG00000008256	BLM	87	66.421	ENSDARG00000077089	blm	84	52.615	Danio_rerio
ENSGALG00000008256	BLM	100	49.423	ENSDNOG00000010159	BLM	84	55.203	Dasypus_novemcinctus
ENSGALG00000008256	BLM	63	64.167	ENSETEG00000015019	BLM	70	47.981	Echinops_telfairi
ENSGALG00000008256	BLM	99	49.012	ENSEASG00005006727	BLM	99	49.355	Equus_asinus_asinus
ENSGALG00000008256	BLM	99	50.780	ENSECAG00000011405	BLM	99	50.984	Equus_caballus
ENSGALG00000008256	BLM	98	50.803	ENSEEUG00000001434	BLM	81	57.388	Erinaceus_europaeus
ENSGALG00000008256	BLM	57	64.250	ENSELUG00000019098	blm	78	51.525	Esox_lucius
ENSGALG00000008256	BLM	88	68.145	ENSFCAG00000006087	BLM	99	51.147	Felis_catus
ENSGALG00000008256	BLM	92	67.054	ENSFALG00000010981	BLM	100	66.925	Ficedula_albicollis
ENSGALG00000008256	BLM	99	46.295	ENSFDAG00000012658	BLM	82	50.407	Fukomys_damarensis
ENSGALG00000008256	BLM	87	62.103	ENSGMOG00000016431	blm	90	62.148	Gadus_morhua
ENSGALG00000008256	BLM	83	51.845	ENSGACG00000010863	blm	100	70.888	Gasterosteus_aculeatus
ENSGALG00000008256	BLM	88	58.067	ENSGAGG00000005383	BLM	97	65.494	Gopherus_agassizii
ENSGALG00000008256	BLM	99	51.163	ENSGGOG00000007710	BLM	77	79.553	Gorilla_gorilla
ENSGALG00000008256	BLM	100	46.966	ENSHBUG00000015943	blm	82	52.492	Haplochromis_burtoni
ENSGALG00000008256	BLM	99	50.747	ENSHGLG00000013231	BLM	99	50.578	Heterocephalus_glaber_female
ENSGALG00000008256	BLM	64	58.333	ENSHCOG00000011455	blm	89	57.080	Hippocampus_comes
ENSGALG00000008256	BLM	66	60.578	ENSIPUG00000000529	blm	73	64.865	Ictalurus_punctatus
ENSGALG00000008256	BLM	86	68.296	ENSSTOG00000005000	BLM	99	49.529	Ictidomys_tridecemlineatus
ENSGALG00000008256	BLM	69	61.204	ENSJJAG00000016322	Blm	94	61.204	Jaculus_jaculus
ENSGALG00000008256	BLM	58	63.280	ENSKMAG00000016608	blm	83	50.700	Kryptolebias_marmoratus
ENSGALG00000008256	BLM	61	70.996	ENSLACG00000006490	BLM	83	56.085	Latimeria_chalumnae
ENSGALG00000008256	BLM	85	64.678	ENSLOCG00000014302	blm	82	52.601	Lepisosteus_oculatus
ENSGALG00000008256	BLM	99	51.012	ENSMFAG00000042982	BLM	77	79.233	Macaca_fascicularis
ENSGALG00000008256	BLM	99	50.978	ENSMMUG00000019526	BLM	77	79.233	Macaca_mulatta
ENSGALG00000008256	BLM	80	57.844	ENSMNEG00000031251	BLM	77	78.914	Macaca_nemestrina
ENSGALG00000008256	BLM	99	48.955	ENSMLEG00000032934	BLM	99	48.955	Mandrillus_leucophaeus
ENSGALG00000008256	BLM	58	64.020	ENSMAMG00000008726	blm	76	54.017	Mastacembelus_armatus
ENSGALG00000008256	BLM	100	45.942	ENSMZEG00005022323	blm	75	55.119	Maylandia_zebra
ENSGALG00000008256	BLM	61	67.795	ENSMAUG00000008953	Blm	79	57.082	Mesocricetus_auratus
ENSGALG00000008256	BLM	87	66.862	ENSMICG00000034442	BLM	99	50.169	Microcebus_murinus
ENSGALG00000008256	BLM	61	67.529	ENSMOCG00000016367	Blm	80	57.266	Microtus_ochrogaster
ENSGALG00000008256	BLM	83	51.538	ENSMMOG00000006959	blm	81	51.583	Mola_mola
ENSGALG00000008256	BLM	100	50.033	ENSMODG00000019449	BLM	84	56.146	Monodelphis_domestica
ENSGALG00000008256	BLM	58	64.198	ENSMALG00000007323	blm	80	52.704	Monopterus_albus
ENSGALG00000008256	BLM	87	67.056	MGP_CAROLIEiJ_G0029907	Blm	99	49.831	Mus_caroli
ENSGALG00000008256	BLM	99	50.574	ENSMUSG00000030528	Blm	99	50.136	Mus_musculus
ENSGALG00000008256	BLM	87	67.096	MGP_PahariEiJ_G0013129	Blm	99	49.863	Mus_pahari
ENSGALG00000008256	BLM	87	67.366	MGP_SPRETEiJ_G0031009	Blm	99	50.102	Mus_spretus
ENSGALG00000008256	BLM	84	50.886	ENSMPUG00000015657	BLM	98	51.086	Mustela_putorius_furo
ENSGALG00000008256	BLM	87	56.048	ENSMLUG00000014697	BLM	85	56.176	Myotis_lucifugus
ENSGALG00000008256	BLM	99	49.831	ENSNGAG00000001275	Blm	79	56.340	Nannospalax_galili
ENSGALG00000008256	BLM	58	64.384	ENSNBRG00000019702	blm	75	54.977	Neolamprologus_brichardi
ENSGALG00000008256	BLM	99	49.932	ENSNLEG00000012087	BLM	99	56.801	Nomascus_leucogenys
ENSGALG00000008256	BLM	68	69.657	ENSMEUG00000007253	BLM	83	53.377	Notamacropus_eugenii
ENSGALG00000008256	BLM	78	71.784	ENSOPRG00000011667	BLM	93	71.646	Ochotona_princeps
ENSGALG00000008256	BLM	77	55.678	ENSODEG00000015373	BLM	99	55.790	Octodon_degus
ENSGALG00000008256	BLM	55	72.057	ENSOANG00000009316	-	100	72.186	Ornithorhynchus_anatinus
ENSGALG00000008256	BLM	99	51.023	ENSOCUG00000013969	BLM	99	50.958	Oryctolagus_cuniculus
ENSGALG00000008256	BLM	57	64.930	ENSORLG00020004812	blm	81	51.704	Oryzias_latipes_hni
ENSGALG00000008256	BLM	100	46.149	ENSORLG00015018640	blm	99	54.004	Oryzias_latipes_hsok
ENSGALG00000008256	BLM	83	51.448	ENSOMEG00000023545	blm	80	52.044	Oryzias_melastigma
ENSGALG00000008256	BLM	99	48.935	ENSOGAG00000005708	BLM	99	48.662	Otolemur_garnettii
ENSGALG00000008256	BLM	99	50.678	ENSOARG00000012875	BLM	99	50.913	Ovis_aries
ENSGALG00000008256	BLM	79	58.550	ENSPPAG00000032173	BLM	83	55.987	Pan_paniscus
ENSGALG00000008256	BLM	87	68.298	ENSPPRG00000002471	BLM	99	50.572	Panthera_pardus
ENSGALG00000008256	BLM	87	67.674	ENSPTIG00000016168	BLM	93	66.563	Panthera_tigris_altaica
ENSGALG00000008256	BLM	80	57.608	ENSPTRG00000007460	BLM	83	55.547	Pan_troglodytes
ENSGALG00000008256	BLM	99	51.113	ENSPANG00000018572	BLM	77	79.233	Papio_anubis
ENSGALG00000008256	BLM	53	66.896	ENSPMGG00000006629	blm	80	66.896	Periophthalmus_magnuspinnatus
ENSGALG00000008256	BLM	99	50.167	ENSPEMG00000017348	Blm	83	56.543	Peromyscus_maniculatus_bairdii
ENSGALG00000008256	BLM	53	58.824	ENSPMAG00000000445	blm	99	58.177	Petromyzon_marinus
ENSGALG00000008256	BLM	83	57.828	ENSPCIG00000006609	BLM	80	58.629	Phascolarctos_cinereus
ENSGALG00000008256	BLM	83	64.070	ENSPFOG00000005059	blm	82	51.419	Poecilia_formosa
ENSGALG00000008256	BLM	70	63.761	ENSPLAG00000017344	blm	82	51.417	Poecilia_latipinna
ENSGALG00000008256	BLM	83	63.945	ENSPMEG00000000321	blm	82	51.336	Poecilia_mexicana
ENSGALG00000008256	BLM	58	63.442	ENSPREG00000007715	blm	82	50.959	Poecilia_reticulata
ENSGALG00000008256	BLM	99	50.648	ENSPPYG00000006784	BLM	99	49.797	Pongo_abelii
ENSGALG00000008256	BLM	70	64.994	ENSPCAG00000008960	BLM	70	64.686	Procavia_capensis
ENSGALG00000008256	BLM	99	44.005	ENSPCOG00000000439	BLM	99	45.783	Propithecus_coquereli
ENSGALG00000008256	BLM	70	82.392	ENSPVAG00000011642	BLM	59	82.392	Pteropus_vampyrus
ENSGALG00000008256	BLM	100	40.027	ENSPNYG00000010956	blm	79	45.108	Pundamilia_nyererei
ENSGALG00000008256	BLM	77	54.874	ENSPNAG00000011714	blm	82	52.723	Pygocentrus_nattereri
ENSGALG00000008256	BLM	99	49.795	ENSRNOG00000011213	Blm	99	50.103	Rattus_norvegicus
ENSGALG00000008256	BLM	82	56.851	ENSRBIG00000029656	BLM	99	59.395	Rhinopithecus_bieti
ENSGALG00000008256	BLM	84	56.680	ENSRROG00000037871	BLM	77	78.914	Rhinopithecus_roxellana
ENSGALG00000008256	BLM	78	71.556	ENSSBOG00000030957	BLM	82	53.568	Saimiri_boliviensis_boliviensis
ENSGALG00000008256	BLM	83	57.810	ENSSHAG00000007988	BLM	84	56.139	Sarcophilus_harrisii
ENSGALG00000008256	BLM	60	61.882	ENSSFOG00015015462	blm	72	59.296	Scleropages_formosus
ENSGALG00000008256	BLM	84	64.444	ENSSDUG00000010955	blm	99	46.091	Seriola_dumerili
ENSGALG00000008256	BLM	58	64.074	ENSSLDG00000000634	blm	99	45.716	Seriola_lalandi_dorsalis
ENSGALG00000008256	BLM	78	54.537	ENSSARG00000006398	BLM	80	54.562	Sorex_araneus
ENSGALG00000008256	BLM	77	64.015	ENSSPUG00000000013	BLM	98	60.766	Sphenodon_punctatus
ENSGALG00000008256	BLM	83	51.966	ENSSPAG00000013999	blm	79	52.986	Stegastes_partitus
ENSGALG00000008256	BLM	78	72.765	ENSSSCG00000001816	BLM	99	51.915	Sus_scrofa
ENSGALG00000008256	BLM	83	65.803	ENSTGUG00000009959	-	100	66.234	Taeniopygia_guttata
ENSGALG00000008256	BLM	57	63.350	ENSTRUG00000019860	blm	81	51.174	Takifugu_rubripes
ENSGALG00000008256	BLM	86	61.294	ENSTNIG00000019246	blm	84	50.452	Tetraodon_nigroviridis
ENSGALG00000008256	BLM	61	65.085	ENSTBEG00000006706	BLM	64	65.085	Tupaia_belangeri
ENSGALG00000008256	BLM	87	55.769	ENSTTRG00000016386	BLM	84	55.842	Tursiops_truncatus
ENSGALG00000008256	BLM	79	72.043	ENSUMAG00000009105	BLM	97	74.014	Ursus_maritimus
ENSGALG00000008256	BLM	87	53.105	ENSVPAG00000000085	BLM	84	53.094	Vicugna_pacos
ENSGALG00000008256	BLM	80	69.947	ENSVVUG00000006402	BLM	77	70.213	Vulpes_vulpes
ENSGALG00000008256	BLM	100	49.220	ENSXETG00000007847	blm	87	52.607	Xenopus_tropicalis
ENSGALG00000008256	BLM	71	63.022	ENSXMAG00000002951	blm	83	50.915	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	21873635.	IBA	Process
GO:0000228	nuclear chromosome	21873635.	IBA	Component
GO:0000400	four-way junction DNA binding	21873635.	IBA	Function
GO:0000400	four-way junction DNA binding	-	ISS	Function
GO:0000403	Y-form DNA binding	21873635.	IBA	Function
GO:0000405	bubble DNA binding	21873635.	IBA	Function
GO:0000712	resolution of meiotic recombination intermediates	21873635.	IBA	Process
GO:0000724	double-strand break repair via homologous recombination	21873635.	IBA	Process
GO:0000729	DNA double-strand break processing	-	ISS	Process
GO:0000731	DNA synthesis involved in DNA repair	21873635.	IBA	Process
GO:0000732	strand displacement	21873635.	IBA	Process
GO:0000733	DNA strand renaturation	-	IEA	Process
GO:0000781	chromosome, telomeric region	21873635.	IBA	Component
GO:0000800	lateral element	21873635.	IBA	Component
GO:0002039	p53 binding	21873635.	IBA	Function
GO:0003677	DNA binding	21873635.	IBA	Function
GO:0003677	DNA binding	28228481.	IDA	Function
GO:0003677	DNA binding	-	ISS	Function
GO:0003697	single-stranded DNA binding	21873635.	IBA	Function
GO:0003697	single-stranded DNA binding	-	ISS	Function
GO:0004003	ATP-dependent DNA helicase activity	28228481.	IDA	Function
GO:0004003	ATP-dependent DNA helicase activity	-	ISS	Function
GO:0005524	ATP binding	21873635.	IBA	Function
GO:0005524	ATP binding	-	ISS	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005657	replication fork	21873635.	IBA	Component
GO:0005694	chromosome	21873635.	IBA	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0006281	DNA repair	21873635.	IBA	Process
GO:0006303	double-strand break repair via nonhomologous end joining	21873635.	IBA	Process
GO:0006310	DNA recombination	21873635.	IBA	Process
GO:0007095	mitotic G2 DNA damage checkpoint	21873635.	IBA	Process
GO:0008094	DNA-dependent ATPase activity	-	ISS	Function
GO:0008270	zinc ion binding	21873635.	IBA	Function
GO:0008270	zinc ion binding	-	ISS	Function
GO:0009378	four-way junction helicase activity	21873635.	IBA	Function
GO:0009378	four-way junction helicase activity	-	ISS	Function
GO:0010165	response to X-ray	21873635.	IBA	Process
GO:0010705	meiotic DNA double-strand break processing involved in reciprocal meiotic recombination	21873635.	IBA	Process
GO:0016363	nuclear matrix	21873635.	IBA	Component
GO:0016605	PML body	21873635.	IBA	Component
GO:0031297	replication fork processing	21873635.	IBA	Process
GO:0032508	DNA duplex unwinding	21873635.	IBA	Process
GO:0032508	DNA duplex unwinding	28228481.	IDA	Process
GO:0032508	DNA duplex unwinding	-	ISS	Process
GO:0036310	annealing helicase activity	21873635.	IBA	Function
GO:0042803	protein homodimerization activity	21873635.	IBA	Function
GO:0042803	protein homodimerization activity	28228481.	IDA	Function
GO:0042803	protein homodimerization activity	-	ISS	Function
GO:0043066	negative regulation of apoptotic process	21873635.	IBA	Process
GO:0043140	ATP-dependent 3'-5' DNA helicase activity	21873635.	IBA	Function
GO:0044806	G-quadruplex DNA unwinding	21873635.	IBA	Process
GO:0045003	double-strand break repair via synthesis-dependent strand annealing	21873635.	IBA	Process
GO:0045120	pronucleus	21873635.	IBA	Component
GO:0045893	positive regulation of transcription, DNA-templated	21873635.	IBA	Process
GO:0045950	negative regulation of mitotic recombination	21873635.	IBA	Process
GO:0046632	alpha-beta T cell differentiation	21873635.	IBA	Process
GO:0046641	positive regulation of alpha-beta T cell proliferation	21873635.	IBA	Process
GO:0051259	protein complex oligomerization	21873635.	IBA	Process
GO:0051259	protein complex oligomerization	28228481.	IDA	Process
GO:0051259	protein complex oligomerization	-	ISS	Process
GO:0051260	protein homooligomerization	21873635.	IBA	Process
GO:0051260	protein homooligomerization	28228481.	IDA	Process
GO:0051307	meiotic chromosome separation	21873635.	IBA	Process
GO:0051782	negative regulation of cell division	21873635.	IBA	Process
GO:0061749	forked DNA-dependent helicase activity	21873635.	IBA	Function
GO:0061749	forked DNA-dependent helicase activity	-	ISS	Function
GO:0061820	telomeric D-loop disassembly	21873635.	IBA	Process
GO:0061821	telomeric D-loop binding	21873635.	IBA	Function
GO:0070244	negative regulation of thymocyte apoptotic process	21873635.	IBA	Process
GO:0071139	resolution of recombination intermediates	21873635.	IBA	Process
GO:0071479	cellular response to ionizing radiation	21873635.	IBA	Process
GO:0072711	cellular response to hydroxyurea	21873635.	IBA	Process
GO:0090329	regulation of DNA-dependent DNA replication	21873635.	IBA	Process
GO:0090329	regulation of DNA-dependent DNA replication	-	ISS	Process
GO:1901291	negative regulation of double-strand break repair via single-strand annealing	21873635.	IBA	Process
GO:1905168	positive regulation of double-strand break repair via homologous recombination	21873635.	IBA	Process
GO:1905773	8-hydroxy-2'-deoxyguanosine DNA binding	21873635.	IBA	Function