EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000008429 (Gene tree)
Gene ID: 421243
Gene Symbol: CRNKL1
Alias: CLF|CRN|Clf1|SYF3
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 12902 bases
Position: chr3:3921732-3934633
Accession: 421243
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000013717	HAT	PF02184.16	4.4e-41	1	2
ENSGALP00000013717	HAT	PF02184.16	4.4e-41	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000013732	CRNKL1-201	3312	XM_419315	ENSGALP00000013717	686 (aa)	XP_419315	F1P3Q8

Gene Model

Click here to download ENSGALG00000008429's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000008429's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000008429	CRNKL1	99	93.431	ENSG00000101343	CRNKL1	99	93.431	Homo_sapiens
ENSGALG00000008429	CRNKL1	99	87.500	ENSAPOG00000009705	crnkl1	97	86.795	Acanthochromis_polyacanthus
ENSGALG00000008429	CRNKL1	99	93.971	ENSAMEG00000000270	CRNKL1	83	94.015	Ailuropoda_melanoleuca
ENSGALG00000008429	CRNKL1	97	87.256	ENSACIG00000015267	crnkl1	89	87.256	Amphilophus_citrinellus
ENSGALG00000008429	CRNKL1	99	87.500	ENSAOCG00000021964	crnkl1	90	87.372	Amphiprion_ocellaris
ENSGALG00000008429	CRNKL1	99	87.500	ENSAPEG00000015041	crnkl1	90	87.372	Amphiprion_percula
ENSGALG00000008429	CRNKL1	99	86.344	ENSATEG00000001068	crnkl1	89	86.197	Anabas_testudineus
ENSGALG00000008429	CRNKL1	99	95.912	ENSAPLG00000013105	CRNKL1	99	95.912	Anas_platyrhynchos
ENSGALG00000008429	CRNKL1	99	93.275	ENSACAG00000005284	CRNKL1	99	93.275	Anolis_carolinensis
ENSGALG00000008429	CRNKL1	92	94.127	ENSANAG00000024889	CRNKL1	99	94.127	Aotus_nancymaae
ENSGALG00000008429	CRNKL1	99	87.758	ENSACLG00000010813	crnkl1	90	87.758	Astatotilapia_calliptera
ENSGALG00000008429	CRNKL1	97	88.120	ENSAMXG00000018334	crnkl1	90	88.191	Astyanax_mexicanus
ENSGALG00000008429	CRNKL1	99	92.993	ENSBTAG00000008472	CRNKL1	99	92.993	Bos_taurus
ENSGALG00000008429	CRNKL1	93	62.986	WBGene00019762	M03F8.3	91	62.079	Caenorhabditis_elegans
ENSGALG00000008429	CRNKL1	99	93.285	ENSCJAG00000005393	CRNKL1	99	93.285	Callithrix_jacchus
ENSGALG00000008429	CRNKL1	99	93.676	ENSCAFG00000005333	CRNKL1	94	93.723	Canis_familiaris
ENSGALG00000008429	CRNKL1	99	93.723	ENSCAFG00020027488	CRNKL1	99	93.723	Canis_lupus_dingo
ENSGALG00000008429	CRNKL1	99	91.971	ENSCHIG00000013171	CRNKL1	99	91.971	Capra_hircus
ENSGALG00000008429	CRNKL1	99	93.577	ENSTSYG00000004197	CRNKL1	99	93.577	Carlito_syrichta
ENSGALG00000008429	CRNKL1	96	92.246	ENSCAPG00000010501	CRNKL1	99	92.246	Cavia_aperea
ENSGALG00000008429	CRNKL1	99	92.701	ENSCPOG00000004418	CRNKL1	99	92.701	Cavia_porcellus
ENSGALG00000008429	CRNKL1	99	93.285	ENSCCAG00000027037	CRNKL1	99	93.285	Cebus_capucinus
ENSGALG00000008429	CRNKL1	99	93.285	ENSCATG00000034247	CRNKL1	99	93.285	Cercocebus_atys
ENSGALG00000008429	CRNKL1	99	93.139	ENSCLAG00000013859	CRNKL1	99	93.139	Chinchilla_lanigera
ENSGALG00000008429	CRNKL1	99	93.285	ENSCSAG00000011434	CRNKL1	99	93.285	Chlorocebus_sabaeus
ENSGALG00000008429	CRNKL1	99	93.235	ENSCHOG00000006371	CRNKL1	84	93.285	Choloepus_hoffmanni
ENSGALG00000008429	CRNKL1	100	94.461	ENSCPBG00000023501	CRNKL1	100	94.461	Chrysemys_picta_bellii
ENSGALG00000008429	CRNKL1	97	68.675	ENSCING00000002709	-	99	67.055	Ciona_intestinalis
ENSGALG00000008429	CRNKL1	99	93.431	ENSCANG00000038789	CRNKL1	99	93.431	Colobus_angolensis_palliatus
ENSGALG00000008429	CRNKL1	99	93.285	ENSCGRG00001001115	-	99	93.285	Cricetulus_griseus_chok1gshd
ENSGALG00000008429	CRNKL1	99	93.285	ENSCGRG00001000687	-	99	93.285	Cricetulus_griseus_chok1gshd
ENSGALG00000008429	CRNKL1	99	93.285	ENSCGRG00000007854	Crnkl1	99	93.285	Cricetulus_griseus_crigri
ENSGALG00000008429	CRNKL1	99	86.834	ENSCSEG00000005594	crnkl1	86	86.834	Cynoglossus_semilaevis
ENSGALG00000008429	CRNKL1	97	87.706	ENSCVAG00000015172	crnkl1	92	85.714	Cyprinodon_variegatus
ENSGALG00000008429	CRNKL1	97	86.878	ENSDARG00000007901	crnkl1	90	85.673	Danio_rerio
ENSGALG00000008429	CRNKL1	99	93.988	ENSDNOG00000016226	CRNKL1	95	93.988	Dasypus_novemcinctus
ENSGALG00000008429	CRNKL1	99	91.606	ENSDORG00000000394	-	99	91.606	Dipodomys_ordii
ENSGALG00000008429	CRNKL1	97	84.731	ENSDORG00000030174	-	99	84.731	Dipodomys_ordii
ENSGALG00000008429	CRNKL1	97	85.285	ENSDORG00000023724	-	98	85.285	Dipodomys_ordii
ENSGALG00000008429	CRNKL1	96	68.769	FBgn0000377	crn	95	68.769	Drosophila_melanogaster
ENSGALG00000008429	CRNKL1	99	81.606	ENSETEG00000003711	CRNKL1	84	81.606	Echinops_telfairi
ENSGALG00000008429	CRNKL1	99	59.363	ENSEBUG00000013461	crnkl1	96	55.182	Eptatretus_burgeri
ENSGALG00000008429	CRNKL1	99	94.015	ENSEASG00005002072	CRNKL1	99	94.015	Equus_asinus_asinus
ENSGALG00000008429	CRNKL1	99	94.015	ENSECAG00000022215	CRNKL1	99	94.015	Equus_caballus
ENSGALG00000008429	CRNKL1	99	91.324	ENSEEUG00000000413	CRNKL1	92	91.387	Erinaceus_europaeus
ENSGALG00000008429	CRNKL1	98	86.099	ENSELUG00000015424	crnkl1	97	84.526	Esox_lucius
ENSGALG00000008429	CRNKL1	99	94.015	ENSFCAG00000000714	CRNKL1	99	94.015	Felis_catus
ENSGALG00000008429	CRNKL1	98	95.536	ENSFALG00000004611	CRNKL1	100	95.536	Ficedula_albicollis
ENSGALG00000008429	CRNKL1	99	93.402	ENSFDAG00000000604	CRNKL1	99	93.285	Fukomys_damarensis
ENSGALG00000008429	CRNKL1	97	87.706	ENSFHEG00000013163	crnkl1	87	87.706	Fundulus_heteroclitus
ENSGALG00000008429	CRNKL1	97	84.903	ENSGMOG00000007609	crnkl1	94	83.261	Gadus_morhua
ENSGALG00000008429	CRNKL1	97	87.106	ENSGAFG00000014249	crnkl1	88	87.106	Gambusia_affinis
ENSGALG00000008429	CRNKL1	97	85.778	ENSGACG00000011852	crnkl1	89	85.778	Gasterosteus_aculeatus
ENSGALG00000008429	CRNKL1	96	92.835	ENSGAGG00000021233	CRNKL1	100	93.440	Gopherus_agassizii
ENSGALG00000008429	CRNKL1	99	93.431	ENSGGOG00000014176	CRNKL1	99	93.431	Gorilla_gorilla
ENSGALG00000008429	CRNKL1	99	87.611	ENSHBUG00000005246	crnkl1	90	87.611	Haplochromis_burtoni
ENSGALG00000008429	CRNKL1	99	92.993	ENSHGLG00000010856	CRNKL1	99	92.993	Heterocephalus_glaber_female
ENSGALG00000008429	CRNKL1	99	92.993	ENSHGLG00100011521	CRNKL1	99	92.993	Heterocephalus_glaber_male
ENSGALG00000008429	CRNKL1	97	85.180	ENSHCOG00000006420	crnkl1	98	83.748	Hippocampus_comes
ENSGALG00000008429	CRNKL1	93	68.868	ENSIPUG00000000315	-	99	70.079	Ictalurus_punctatus
ENSGALG00000008429	CRNKL1	94	87.211	ENSIPUG00000006751	crnkl1	93	85.522	Ictalurus_punctatus
ENSGALG00000008429	CRNKL1	97	75.415	ENSIPUG00000006836	-	98	75.412	Ictalurus_punctatus
ENSGALG00000008429	CRNKL1	99	93.431	ENSSTOG00000014747	CRNKL1	99	93.431	Ictidomys_tridecemlineatus
ENSGALG00000008429	CRNKL1	99	91.155	ENSJJAG00000016926	Crnkl1	99	91.155	Jaculus_jaculus
ENSGALG00000008429	CRNKL1	99	87.149	ENSKMAG00000003620	crnkl1	86	87.149	Kryptolebias_marmoratus
ENSGALG00000008429	CRNKL1	97	70.623	ENSLBEG00000003543	crnkl1	92	70.803	Labrus_bergylta
ENSGALG00000008429	CRNKL1	99	89.327	ENSLACG00000001129	CRNKL1	100	89.327	Latimeria_chalumnae
ENSGALG00000008429	CRNKL1	97	90.075	ENSLOCG00000016889	crnkl1	95	88.759	Lepisosteus_oculatus
ENSGALG00000008429	CRNKL1	99	92.711	ENSLAFG00000004512	CRNKL1	99	93.440	Loxodonta_africana
ENSGALG00000008429	CRNKL1	99	93.285	ENSMFAG00000039893	CRNKL1	99	93.285	Macaca_fascicularis
ENSGALG00000008429	CRNKL1	99	93.285	ENSMMUG00000007709	CRNKL1	99	93.285	Macaca_mulatta
ENSGALG00000008429	CRNKL1	99	93.285	ENSMNEG00000037490	CRNKL1	99	93.285	Macaca_nemestrina
ENSGALG00000008429	CRNKL1	99	93.285	ENSMLEG00000034885	CRNKL1	99	93.285	Mandrillus_leucophaeus
ENSGALG00000008429	CRNKL1	99	86.637	ENSMAMG00000008757	crnkl1	90	86.637	Mastacembelus_armatus
ENSGALG00000008429	CRNKL1	99	87.758	ENSMZEG00005022345	crnkl1	90	87.758	Maylandia_zebra
ENSGALG00000008429	CRNKL1	100	99.127	ENSMGAG00000003452	CRNKL1	94	99.127	Meleagris_gallopavo
ENSGALG00000008429	CRNKL1	99	93.139	ENSMAUG00000020764	Crnkl1	99	93.139	Mesocricetus_auratus
ENSGALG00000008429	CRNKL1	99	93.723	ENSMICG00000006048	CRNKL1	99	93.723	Microcebus_murinus
ENSGALG00000008429	CRNKL1	97	66.717	ENSMOCG00000004179	-	95	66.815	Microtus_ochrogaster
ENSGALG00000008429	CRNKL1	99	85.366	ENSMOCG00000000681	-	99	85.366	Microtus_ochrogaster
ENSGALG00000008429	CRNKL1	92	85.759	ENSMMOG00000017601	crnkl1	97	85.759	Mola_mola
ENSGALG00000008429	CRNKL1	99	85.839	ENSMODG00000010857	-	99	85.839	Monodelphis_domestica
ENSGALG00000008429	CRNKL1	99	90.346	ENSMODG00000005961	-	99	90.346	Monodelphis_domestica
ENSGALG00000008429	CRNKL1	98	61.982	ENSMALG00000011211	crnkl1	88	63.811	Monopterus_albus
ENSGALG00000008429	CRNKL1	99	93.139	MGP_CAROLIEiJ_G0024394	Crnkl1	99	93.139	Mus_caroli
ENSGALG00000008429	CRNKL1	99	93.285	ENSMUSG00000001767	Crnkl1	99	93.285	Mus_musculus
ENSGALG00000008429	CRNKL1	99	91.825	MGP_PahariEiJ_G0025838	Crnkl1	99	91.825	Mus_pahari
ENSGALG00000008429	CRNKL1	99	93.285	MGP_SPRETEiJ_G0025312	Crnkl1	99	93.285	Mus_spretus
ENSGALG00000008429	CRNKL1	99	94.161	ENSMPUG00000001226	CRNKL1	99	94.161	Mustela_putorius_furo
ENSGALG00000008429	CRNKL1	99	93.392	ENSMLUG00000016513	CRNKL1	89	93.440	Myotis_lucifugus
ENSGALG00000008429	CRNKL1	99	91.261	ENSNGAG00000023097	Crnkl1	99	91.261	Nannospalax_galili
ENSGALG00000008429	CRNKL1	99	87.906	ENSNBRG00000007867	crnkl1	89	87.906	Neolamprologus_brichardi
ENSGALG00000008429	CRNKL1	99	89.781	ENSNLEG00000009862	CRNKL1	99	89.781	Nomascus_leucogenys
ENSGALG00000008429	CRNKL1	98	93.284	ENSMEUG00000012167	-	100	93.284	Notamacropus_eugenii
ENSGALG00000008429	CRNKL1	99	84.548	ENSMEUG00000002361	-	99	84.548	Notamacropus_eugenii
ENSGALG00000008429	CRNKL1	86	63.127	ENSOPRG00000009242	-	61	63.127	Ochotona_princeps
ENSGALG00000008429	CRNKL1	99	93.139	ENSODEG00000012175	CRNKL1	99	93.139	Octodon_degus
ENSGALG00000008429	CRNKL1	99	87.758	ENSONIG00000018728	crnkl1	89	87.758	Oreochromis_niloticus
ENSGALG00000008429	CRNKL1	99	92.489	ENSOCUG00000015484	CRNKL1	82	93.129	Oryctolagus_cuniculus
ENSGALG00000008429	CRNKL1	97	85.757	ENSORLG00000017240	crnkl1	94	81.899	Oryzias_latipes
ENSGALG00000008429	CRNKL1	97	85.907	ENSORLG00020001742	crnkl1	89	85.907	Oryzias_latipes_hni
ENSGALG00000008429	CRNKL1	97	85.907	ENSORLG00015019564	crnkl1	89	85.907	Oryzias_latipes_hsok
ENSGALG00000008429	CRNKL1	100	84.402	ENSOMEG00000019895	crnkl1	92	84.402	Oryzias_melastigma
ENSGALG00000008429	CRNKL1	99	93.139	ENSOGAG00000011544	CRNKL1	99	93.139	Otolemur_garnettii
ENSGALG00000008429	CRNKL1	99	93.088	ENSOARG00000002150	CRNKL1	89	93.139	Ovis_aries
ENSGALG00000008429	CRNKL1	99	92.353	ENSPPAG00000027847	CRNKL1	83	92.409	Pan_paniscus
ENSGALG00000008429	CRNKL1	99	94.015	ENSPPRG00000001955	CRNKL1	99	94.015	Panthera_pardus
ENSGALG00000008429	CRNKL1	99	94.015	ENSPTIG00000007393	CRNKL1	99	94.015	Panthera_tigris_altaica
ENSGALG00000008429	CRNKL1	99	93.577	ENSPTRG00000030609	CRNKL1	99	93.577	Pan_troglodytes
ENSGALG00000008429	CRNKL1	99	93.285	ENSPANG00000017420	CRNKL1	99	93.285	Papio_anubis
ENSGALG00000008429	CRNKL1	97	82.282	ENSPKIG00000017093	crnkl1	89	81.552	Paramormyrops_kingsleyae
ENSGALG00000008429	CRNKL1	99	93.558	ENSPSIG00000012705	CRNKL1	99	93.558	Pelodiscus_sinensis
ENSGALG00000008429	CRNKL1	99	78.676	ENSPMGG00000006263	crnkl1	96	78.676	Periophthalmus_magnuspinnatus
ENSGALG00000008429	CRNKL1	99	93.577	ENSPEMG00000000073	-	99	93.577	Peromyscus_maniculatus_bairdii
ENSGALG00000008429	CRNKL1	99	81.567	ENSPMAG00000002250	crnkl1	99	81.567	Petromyzon_marinus
ENSGALG00000008429	CRNKL1	99	92.847	ENSPCIG00000025825	CRNKL1	96	92.847	Phascolarctos_cinereus
ENSGALG00000008429	CRNKL1	97	86.957	ENSPFOG00000005102	crnkl1	90	86.957	Poecilia_formosa
ENSGALG00000008429	CRNKL1	97	86.957	ENSPLAG00000007288	crnkl1	87	86.957	Poecilia_latipinna
ENSGALG00000008429	CRNKL1	97	87.106	ENSPMEG00000008865	crnkl1	91	87.106	Poecilia_mexicana
ENSGALG00000008429	CRNKL1	97	86.657	ENSPREG00000012615	crnkl1	92	84.964	Poecilia_reticulata
ENSGALG00000008429	CRNKL1	99	93.382	ENSPPYG00000010747	CRNKL1	81	93.431	Pongo_abelii
ENSGALG00000008429	CRNKL1	99	87.794	ENSPCAG00000003296	CRNKL1	85	87.883	Procavia_capensis
ENSGALG00000008429	CRNKL1	99	92.647	ENSPCOG00000017608	CRNKL1	83	92.701	Propithecus_coquereli
ENSGALG00000008429	CRNKL1	99	93.382	ENSPVAG00000006207	CRNKL1	83	93.431	Pteropus_vampyrus
ENSGALG00000008429	CRNKL1	99	87.611	ENSPNYG00000001977	crnkl1	90	87.611	Pundamilia_nyererei
ENSGALG00000008429	CRNKL1	98	88.674	ENSPNAG00000001507	crnkl1	98	84.012	Pygocentrus_nattereri
ENSGALG00000008429	CRNKL1	99	92.993	ENSRNOG00000040045	Crnkl1	99	92.993	Rattus_norvegicus
ENSGALG00000008429	CRNKL1	99	93.285	ENSRNOG00000010587	Crnkl1	99	93.285	Rattus_norvegicus
ENSGALG00000008429	CRNKL1	99	93.139	ENSRBIG00000031770	CRNKL1	99	93.139	Rhinopithecus_bieti
ENSGALG00000008429	CRNKL1	99	92.993	ENSRROG00000040450	CRNKL1	99	92.993	Rhinopithecus_roxellana
ENSGALG00000008429	CRNKL1	94	37.881	YLR117C	CLF1	99	37.971	Saccharomyces_cerevisiae
ENSGALG00000008429	CRNKL1	99	93.285	ENSSBOG00000029672	CRNKL1	99	93.285	Saimiri_boliviensis_boliviensis
ENSGALG00000008429	CRNKL1	96	74.507	ENSSHAG00000011199	CRNKL1	99	74.507	Sarcophilus_harrisii
ENSGALG00000008429	CRNKL1	97	87.632	ENSSFOG00015000946	crnkl1	89	85.985	Scleropages_formosus
ENSGALG00000008429	CRNKL1	99	85.234	ENSSMAG00000007933	crnkl1	89	85.234	Scophthalmus_maximus
ENSGALG00000008429	CRNKL1	99	80.147	ENSSDUG00000012625	crnkl1	87	80.147	Seriola_dumerili
ENSGALG00000008429	CRNKL1	99	87.187	ENSSLDG00000021413	crnkl1	88	87.187	Seriola_lalandi_dorsalis
ENSGALG00000008429	CRNKL1	99	92.847	ENSSARG00000006443	CRNKL1	82	92.847	Sorex_araneus
ENSGALG00000008429	CRNKL1	99	93.421	ENSSPUG00000005254	CRNKL1	99	93.421	Sphenodon_punctatus
ENSGALG00000008429	CRNKL1	97	88.306	ENSSPAG00000016150	crnkl1	86	88.306	Stegastes_partitus
ENSGALG00000008429	CRNKL1	99	93.723	ENSSSCG00000038587	CRNKL1	99	93.723	Sus_scrofa
ENSGALG00000008429	CRNKL1	100	95.633	ENSTGUG00000007645	CRNKL1	98	95.633	Taeniopygia_guttata
ENSGALG00000008429	CRNKL1	98	81.315	ENSTRUG00000015417	crnkl1	90	80.441	Takifugu_rubripes
ENSGALG00000008429	CRNKL1	97	85.479	ENSTNIG00000010710	crnkl1	99	83.988	Tetraodon_nigroviridis
ENSGALG00000008429	CRNKL1	91	92.000	ENSTBEG00000001304	CRNKL1	82	92.063	Tupaia_belangeri
ENSGALG00000008429	CRNKL1	91	89.440	ENSTTRG00000000484	CRNKL1	81	89.524	Tursiops_truncatus
ENSGALG00000008429	CRNKL1	99	94.015	ENSUAMG00000018586	CRNKL1	99	94.015	Ursus_americanus
ENSGALG00000008429	CRNKL1	99	94.015	ENSUMAG00000024957	CRNKL1	99	94.015	Ursus_maritimus
ENSGALG00000008429	CRNKL1	99	93.676	ENSVVUG00000012559	CRNKL1	82	93.723	Vulpes_vulpes
ENSGALG00000008429	CRNKL1	100	90.407	ENSXETG00000009698	crnkl1	100	89.520	Xenopus_tropicalis
ENSGALG00000008429	CRNKL1	97	86.078	ENSXCOG00000000824	crnkl1	89	86.078	Xiphophorus_couchianus
ENSGALG00000008429	CRNKL1	97	87.106	ENSXMAG00000006896	crnkl1	89	87.106	Xiphophorus_maculatus