EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000008431 (Gene tree)
Gene ID: 422358
Gene Symbol: SMARCA1
Alias: ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SWI|hSNF2L
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 26322 bases
Position: chr4:14314490-14340811
Accession: 11097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000013722	ResIII	PF04851.15	2e-11	1	1
ENSGALP00000013722	DEAD	PF00270.29	7.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000013737	SMARCA1-201	3033	-	ENSGALP00000013722	1010 (aa)	-	F1P3Q4

Gene Model

Click here to download ENSGALG00000008431's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000008431's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000008431	SMARCA1	96	93.018	ENSG00000102038	SMARCA1	94	91.037	Homo_sapiens
ENSGALG00000008431	SMARCA1	94	85.340	ENSAPOG00000016035	smarca5	96	85.666	Acanthochromis_polyacanthus
ENSGALG00000008431	SMARCA1	96	91.481	ENSAMEG00000015218	SMARCA1	94	89.552	Ailuropoda_melanoleuca
ENSGALG00000008431	SMARCA1	87	86.333	ENSACIG00000016982	smarca5	97	86.452	Amphilophus_citrinellus
ENSGALG00000008431	SMARCA1	94	85.340	ENSAOCG00000015578	smarca5	96	81.791	Amphiprion_ocellaris
ENSGALG00000008431	SMARCA1	94	85.340	ENSAPEG00000011117	smarca5	97	85.732	Amphiprion_percula
ENSGALG00000008431	SMARCA1	95	85.162	ENSATEG00000012894	smarca5	96	83.148	Anabas_testudineus
ENSGALG00000008431	SMARCA1	95	99.374	ENSAPLG00000013149	SMARCA1	98	99.374	Anas_platyrhynchos
ENSGALG00000008431	SMARCA1	99	94.836	ENSACAG00000011376	SMARCA1	96	94.836	Anolis_carolinensis
ENSGALG00000008431	SMARCA1	96	87.782	ENSANAG00000023098	SMARCA1	94	85.700	Aotus_nancymaae
ENSGALG00000008431	SMARCA1	95	85.432	ENSACLG00000025356	smarca5	96	82.423	Astatotilapia_calliptera
ENSGALG00000008431	SMARCA1	89	92.865	ENSAMXG00000011227	smarca1	97	93.958	Astyanax_mexicanus
ENSGALG00000008431	SMARCA1	99	82.540	ENSAMXG00000005709	smarca5	96	82.540	Astyanax_mexicanus
ENSGALG00000008431	SMARCA1	96	92.402	ENSBTAG00000002292	SMARCA1	95	89.741	Bos_taurus
ENSGALG00000008431	SMARCA1	97	63.417	WBGene00002169	isw-1	96	63.934	Caenorhabditis_elegans
ENSGALG00000008431	SMARCA1	96	93.121	ENSCJAG00000002868	SMARCA1	95	90.873	Callithrix_jacchus
ENSGALG00000008431	SMARCA1	96	82.644	ENSCAFG00000018673	SMARCA1	95	83.951	Canis_familiaris
ENSGALG00000008431	SMARCA1	96	92.916	ENSCAFG00020001751	SMARCA1	94	90.937	Canis_lupus_dingo
ENSGALG00000008431	SMARCA1	96	92.505	ENSCHIG00000009837	SMARCA1	93	90.927	Capra_hircus
ENSGALG00000008431	SMARCA1	97	92.923	ENSTSYG00000004240	SMARCA1	96	92.642	Carlito_syrichta
ENSGALG00000008431	SMARCA1	97	90.495	ENSCPOG00000013601	SMARCA1	94	89.980	Cavia_porcellus
ENSGALG00000008431	SMARCA1	96	89.938	ENSCCAG00000030817	SMARCA1	94	88.016	Cebus_capucinus
ENSGALG00000008431	SMARCA1	97	92.835	ENSCATG00000015921	SMARCA1	95	91.037	Cercocebus_atys
ENSGALG00000008431	SMARCA1	96	91.889	ENSCLAG00000002171	SMARCA1	94	89.829	Chinchilla_lanigera
ENSGALG00000008431	SMARCA1	96	93.018	ENSCSAG00000008460	SMARCA1	94	91.037	Chlorocebus_sabaeus
ENSGALG00000008431	SMARCA1	97	97.955	ENSCPBG00000001146	SMARCA1	92	97.955	Chrysemys_picta_bellii
ENSGALG00000008431	SMARCA1	97	73.104	ENSCING00000004110	swi/snf	96	73.272	Ciona_intestinalis
ENSGALG00000008431	SMARCA1	98	72.563	ENSCSAVG00000004620	-	100	74.499	Ciona_savignyi
ENSGALG00000008431	SMARCA1	96	92.916	ENSCANG00000007183	SMARCA1	94	90.937	Colobus_angolensis_palliatus
ENSGALG00000008431	SMARCA1	96	91.349	ENSCGRG00001010776	Smarca1	93	89.617	Cricetulus_griseus_chok1gshd
ENSGALG00000008431	SMARCA1	97	90.142	ENSCGRG00000015301	Smarca1	96	90.580	Cricetulus_griseus_crigri
ENSGALG00000008431	SMARCA1	97	82.696	ENSCSEG00000000328	smarca5	96	82.797	Cynoglossus_semilaevis
ENSGALG00000008431	SMARCA1	95	84.391	ENSCVAG00000008668	smarca5	97	85.145	Cyprinodon_variegatus
ENSGALG00000008431	SMARCA1	98	87.917	ENSDARG00000012776	smarca1	96	88.147	Danio_rerio
ENSGALG00000008431	SMARCA1	99	82.129	ENSDARG00000052348	smarca5	96	82.129	Danio_rerio
ENSGALG00000008431	SMARCA1	99	89.713	ENSDNOG00000004315	SMARCA1	95	90.625	Dasypus_novemcinctus
ENSGALG00000008431	SMARCA1	98	90.161	ENSDORG00000009270	Smarca1	95	89.067	Dipodomys_ordii
ENSGALG00000008431	SMARCA1	96	73.620	FBgn0011604	Iswi	92	75.052	Drosophila_melanogaster
ENSGALG00000008431	SMARCA1	81	89.091	ENSETEG00000017426	SMARCA1	83	89.091	Echinops_telfairi
ENSGALG00000008431	SMARCA1	98	81.590	ENSEBUG00000001239	smarca5	98	81.590	Eptatretus_burgeri
ENSGALG00000008431	SMARCA1	96	88.627	ENSEASG00005008218	SMARCA1	98	87.500	Equus_asinus_asinus
ENSGALG00000008431	SMARCA1	96	92.710	ENSECAG00000012106	SMARCA1	94	90.462	Equus_caballus
ENSGALG00000008431	SMARCA1	79	93.046	ENSEEUG00000014927	SMARCA1	80	93.046	Erinaceus_europaeus
ENSGALG00000008431	SMARCA1	97	90.061	ENSELUG00000010515	smarca1	96	90.061	Esox_lucius
ENSGALG00000008431	SMARCA1	97	92.528	ENSFCAG00000018496	SMARCA1	94	90.726	Felis_catus
ENSGALG00000008431	SMARCA1	90	99.124	ENSFALG00000000209	SMARCA1	98	99.124	Ficedula_albicollis
ENSGALG00000008431	SMARCA1	97	90.909	ENSFDAG00000009818	SMARCA1	95	91.358	Fukomys_damarensis
ENSGALG00000008431	SMARCA1	95	85.057	ENSFHEG00000007687	smarca5	91	85.848	Fundulus_heteroclitus
ENSGALG00000008431	SMARCA1	95	85.266	ENSGAFG00000017731	smarca5	96	82.200	Gambusia_affinis
ENSGALG00000008431	SMARCA1	94	98.209	ENSGAGG00000023575	SMARCA1	98	98.209	Gopherus_agassizii
ENSGALG00000008431	SMARCA1	73	87.571	ENSGGOG00000012841	-	98	84.980	Gorilla_gorilla
ENSGALG00000008431	SMARCA1	96	91.376	ENSHGLG00000003080	SMARCA1	94	89.225	Heterocephalus_glaber_female
ENSGALG00000008431	SMARCA1	96	90.984	ENSHGLG00100001102	SMARCA1	96	91.259	Heterocephalus_glaber_male
ENSGALG00000008431	SMARCA1	95	85.057	ENSHCOG00000005458	smarca5	96	81.791	Hippocampus_comes
ENSGALG00000008431	SMARCA1	97	89.796	ENSIPUG00000016905	Smarca1	96	91.226	Ictalurus_punctatus
ENSGALG00000008431	SMARCA1	97	83.486	ENSIPUG00000005229	SMARCA5	95	84.647	Ictalurus_punctatus
ENSGALG00000008431	SMARCA1	97	92.828	ENSSTOG00000014524	SMARCA1	96	89.214	Ictidomys_tridecemlineatus
ENSGALG00000008431	SMARCA1	97	91.260	ENSJJAG00000002593	Smarca1	95	89.909	Jaculus_jaculus
ENSGALG00000008431	SMARCA1	95	84.744	ENSKMAG00000003777	smarca5	96	81.467	Kryptolebias_marmoratus
ENSGALG00000008431	SMARCA1	94	82.932	ENSLBEG00000013295	SMARCA1	100	85.588	Labrus_bergylta
ENSGALG00000008431	SMARCA1	98	82.477	ENSLBEG00000018112	smarca5	98	81.683	Labrus_bergylta
ENSGALG00000008431	SMARCA1	99	93.480	ENSLACG00000016697	SMARCA1	98	93.480	Latimeria_chalumnae
ENSGALG00000008431	SMARCA1	95	93.132	ENSLOCG00000014591	smarca1	94	93.132	Lepisosteus_oculatus
ENSGALG00000008431	SMARCA1	97	91.845	ENSLAFG00000000896	SMARCA1	98	91.727	Loxodonta_africana
ENSGALG00000008431	SMARCA1	97	92.835	ENSMFAG00000002117	SMARCA1	96	93.043	Macaca_fascicularis
ENSGALG00000008431	SMARCA1	97	92.835	ENSMMUG00000008818	SMARCA1	97	93.497	Macaca_mulatta
ENSGALG00000008431	SMARCA1	97	92.835	ENSMNEG00000041768	SMARCA1	96	93.043	Macaca_nemestrina
ENSGALG00000008431	SMARCA1	96	92.916	ENSMLEG00000043198	SMARCA1	94	90.937	Mandrillus_leucophaeus
ENSGALG00000008431	SMARCA1	95	85.016	ENSMAMG00000014294	smarca5	96	82.125	Mastacembelus_armatus
ENSGALG00000008431	SMARCA1	95	85.432	ENSMZEG00005009369	smarca5	96	82.423	Maylandia_zebra
ENSGALG00000008431	SMARCA1	97	98.384	ENSMGAG00000007042	SMARCA1	98	98.384	Meleagris_gallopavo
ENSGALG00000008431	SMARCA1	96	90.501	ENSMAUG00000008133	Smarca1	94	88.867	Mesocricetus_auratus
ENSGALG00000008431	SMARCA1	99	90.647	ENSMICG00000015768	SMARCA1	94	90.909	Microcebus_murinus
ENSGALG00000008431	SMARCA1	99	88.614	ENSMOCG00000009464	Smarca1	94	88.446	Microtus_ochrogaster
ENSGALG00000008431	SMARCA1	95	83.455	ENSMMOG00000005547	smarca5	97	83.455	Mola_mola
ENSGALG00000008431	SMARCA1	99	94.030	ENSMODG00000013187	-	96	94.030	Monodelphis_domestica
ENSGALG00000008431	SMARCA1	95	85.057	ENSMALG00000002081	smarca5	99	81.207	Monopterus_albus
ENSGALG00000008431	SMARCA1	97	90.733	MGP_CAROLIEiJ_G0033034	Smarca1	94	89.257	Mus_caroli
ENSGALG00000008431	SMARCA1	97	90.835	ENSMUSG00000031099	Smarca1	94	89.357	Mus_musculus
ENSGALG00000008431	SMARCA1	97	90.631	MGP_PahariEiJ_G0031579	Smarca1	94	89.157	Mus_pahari
ENSGALG00000008431	SMARCA1	97	90.835	MGP_SPRETEiJ_G0034192	Smarca1	94	89.357	Mus_spretus
ENSGALG00000008431	SMARCA1	96	91.582	ENSMPUG00000017423	SMARCA1	89	89.652	Mustela_putorius_furo
ENSGALG00000008431	SMARCA1	99	87.635	ENSMLUG00000029614	SMARCA1	94	87.849	Myotis_lucifugus
ENSGALG00000008431	SMARCA1	96	91.522	ENSNGAG00000006492	Smarca1	94	90.539	Nannospalax_galili
ENSGALG00000008431	SMARCA1	95	85.432	ENSNBRG00000004463	smarca5	96	85.432	Neolamprologus_brichardi
ENSGALG00000008431	SMARCA1	97	91.947	ENSNLEG00000015179	SMARCA1	96	92.420	Nomascus_leucogenys
ENSGALG00000008431	SMARCA1	93	85.924	ENSMEUG00000008819	SMARCA1	100	85.924	Notamacropus_eugenii
ENSGALG00000008431	SMARCA1	99	88.258	ENSODEG00000012163	SMARCA1	95	88.645	Octodon_degus
ENSGALG00000008431	SMARCA1	95	85.432	ENSONIG00000009993	smarca5	96	82.423	Oreochromis_niloticus
ENSGALG00000008431	SMARCA1	94	97.466	ENSOANG00000002862	SMARCA1	97	97.466	Ornithorhynchus_anatinus
ENSGALG00000008431	SMARCA1	96	92.094	ENSOCUG00000001047	SMARCA1	94	90.020	Oryctolagus_cuniculus
ENSGALG00000008431	SMARCA1	95	85.684	ENSORLG00000021998	smarca5	98	81.641	Oryzias_latipes
ENSGALG00000008431	SMARCA1	95	85.789	ENSORLG00020017679	smarca5	95	83.535	Oryzias_latipes_hni
ENSGALG00000008431	SMARCA1	95	85.684	ENSORLG00015017210	smarca5	96	81.881	Oryzias_latipes_hsok
ENSGALG00000008431	SMARCA1	95	85.789	ENSOMEG00000000086	smarca5	97	81.980	Oryzias_melastigma
ENSGALG00000008431	SMARCA1	97	92.012	ENSOGAG00000004399	SMARCA1	97	90.098	Otolemur_garnettii
ENSGALG00000008431	SMARCA1	97	91.296	ENSOARG00000014638	SMARCA1	96	93.404	Ovis_aries
ENSGALG00000008431	SMARCA1	96	93.018	ENSPPAG00000034647	SMARCA1	94	91.037	Pan_paniscus
ENSGALG00000008431	SMARCA1	97	92.733	ENSPPRG00000008929	SMARCA1	94	90.927	Panthera_pardus
ENSGALG00000008431	SMARCA1	97	90.827	ENSPTIG00000000915	SMARCA1	94	91.095	Panthera_tigris_altaica
ENSGALG00000008431	SMARCA1	97	92.835	ENSPTRG00000049876	SMARCA1	95	91.037	Pan_troglodytes
ENSGALG00000008431	SMARCA1	96	93.018	ENSPANG00000003871	SMARCA1	94	91.037	Papio_anubis
ENSGALG00000008431	SMARCA1	97	87.462	ENSPKIG00000013411	smarca1	97	87.487	Paramormyrops_kingsleyae
ENSGALG00000008431	SMARCA1	97	96.667	ENSPSIG00000010101	SMARCA1	98	98.209	Pelodiscus_sinensis
ENSGALG00000008431	SMARCA1	96	91.113	ENSPEMG00000017503	Smarca1	94	89.468	Peromyscus_maniculatus_bairdii
ENSGALG00000008431	SMARCA1	99	94.444	ENSPCIG00000015460	SMARCA1	98	95.939	Phascolarctos_cinereus
ENSGALG00000008431	SMARCA1	94	85.310	ENSPFOG00000007649	smarca5	96	82.000	Poecilia_formosa
ENSGALG00000008431	SMARCA1	94	85.310	ENSPLAG00000003363	smarca5	96	82.000	Poecilia_latipinna
ENSGALG00000008431	SMARCA1	95	85.162	ENSPMEG00000019849	smarca5	96	82.100	Poecilia_mexicana
ENSGALG00000008431	SMARCA1	95	85.162	ENSPREG00000023250	smarca5	96	82.100	Poecilia_reticulata
ENSGALG00000008431	SMARCA1	96	90.144	ENSPPYG00000020703	SMARCA1	94	88.218	Pongo_abelii
ENSGALG00000008431	SMARCA1	77	84.626	ENSPCOG00000020722	SMARCA1	94	88.840	Propithecus_coquereli
ENSGALG00000008431	SMARCA1	91	91.003	ENSPVAG00000003805	SMARCA1	97	82.566	Pteropus_vampyrus
ENSGALG00000008431	SMARCA1	58	86.849	ENSPNYG00000012299	smarca5	91	85.676	Pundamilia_nyererei
ENSGALG00000008431	SMARCA1	97	91.095	ENSRNOG00000003762	Smarca1	93	89.707	Rattus_norvegicus
ENSGALG00000008431	SMARCA1	96	92.916	ENSRROG00000034167	SMARCA1	94	90.937	Rhinopithecus_roxellana
ENSGALG00000008431	SMARCA1	97	91.793	ENSSBOG00000020641	SMARCA1	96	93.936	Saimiri_boliviensis_boliviensis
ENSGALG00000008431	SMARCA1	94	88.936	ENSSHAG00000013518	SMARCA1	97	88.936	Sarcophilus_harrisii
ENSGALG00000008431	SMARCA1	96	84.979	ENSSFOG00015016794	smarca5	98	85.895	Scleropages_formosus
ENSGALG00000008431	SMARCA1	97	90.844	ENSSFOG00015009043	smarca1	96	90.844	Scleropages_formosus
ENSGALG00000008431	SMARCA1	96	84.058	ENSSMAG00000004801	smarca5	97	82.036	Scophthalmus_maximus
ENSGALG00000008431	SMARCA1	95	84.807	ENSSDUG00000020690	smarca5	96	82.863	Seriola_dumerili
ENSGALG00000008431	SMARCA1	95	84.807	ENSSLDG00000025190	smarca5	96	82.863	Seriola_lalandi_dorsalis
ENSGALG00000008431	SMARCA1	89	84.432	ENSSARG00000000842	SMARCA1	90	85.038	Sorex_araneus
ENSGALG00000008431	SMARCA1	99	96.051	ENSSPUG00000000590	SMARCA1	98	96.051	Sphenodon_punctatus
ENSGALG00000008431	SMARCA1	97	83.283	ENSSPAG00000002894	smarca5	94	86.164	Stegastes_partitus
ENSGALG00000008431	SMARCA1	97	92.426	ENSSSCG00000012649	SMARCA1	95	91.230	Sus_scrofa
ENSGALG00000008431	SMARCA1	95	99.374	ENSTGUG00000003899	-	98	99.374	Taeniopygia_guttata
ENSGALG00000008431	SMARCA1	95	85.162	ENSTRUG00000014094	smarca5	96	82.154	Takifugu_rubripes
ENSGALG00000008431	SMARCA1	94	83.979	ENSTNIG00000017717	smarca5	95	81.038	Tetraodon_nigroviridis
ENSGALG00000008431	SMARCA1	97	84.747	ENSTBEG00000014973	SMARCA1	98	85.082	Tupaia_belangeri
ENSGALG00000008431	SMARCA1	96	88.313	ENSTTRG00000006168	SMARCA1	98	88.716	Tursiops_truncatus
ENSGALG00000008431	SMARCA1	96	92.300	ENSUAMG00000020201	SMARCA1	94	90.332	Ursus_americanus
ENSGALG00000008431	SMARCA1	97	87.971	ENSUMAG00000004073	SMARCA1	96	93.171	Ursus_maritimus
ENSGALG00000008431	SMARCA1	76	93.237	ENSVPAG00000010492	-	77	93.814	Vicugna_pacos
ENSGALG00000008431	SMARCA1	97	92.923	ENSVVUG00000008878	SMARCA1	98	93.936	Vulpes_vulpes
ENSGALG00000008431	SMARCA1	95	93.743	ENSXETG00000001526	smarca1	96	93.743	Xenopus_tropicalis
ENSGALG00000008431	SMARCA1	95	84.807	ENSXCOG00000011170	smarca5	95	84.807	Xiphophorus_couchianus
ENSGALG00000008431	SMARCA1	95	84.807	ENSXMAG00000009678	smarca5	98	85.246	Xiphophorus_maculatus