EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000008765 (Gene tree)
Gene ID: 421267
Gene Symbol: C1D
Alias: -
Full Name: Gallus gallus C1D nuclear receptor corepressor (C1D)%2C transcript variant 2%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 17513 bases
Position: chr3:11828964-11846476
Accession: NM_001031036
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000014242	Sas10_Utp3	PF04000.15	8.2e-19	1	1
ENSGALP00000060699	Sas10_Utp3	PF04000.15	8.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000088871	-	2499	-	ENSGALP00000060699	144 (aa)	XP_015133529	F1NRP5
ENSGALT00000014258	-	1020	-	ENSGALP00000014242	144 (aa)	XP_015133529	F1NRP5

Gene Model

Click here to download ENSGALG00000008765's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000008765's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000008765	C1D	89	80.469	ENSG00000197223	C1D	90	80.469	Homo_sapiens
ENSGALG00000008765	C1D	87	66.400	ENSAPOG00000005466	c1d	84	66.400	Acanthochromis_polyacanthus
ENSGALG00000008765	C1D	89	82.031	ENSAMEG00000004859	C1D	87	82.031	Ailuropoda_melanoleuca
ENSGALG00000008765	C1D	90	65.116	ENSACIG00000012684	c1d	84	65.116	Amphilophus_citrinellus
ENSGALG00000008765	C1D	92	60.606	ENSAOCG00000020354	c1d	86	60.606	Amphiprion_ocellaris
ENSGALG00000008765	C1D	96	60.145	ENSAPEG00000001403	c1d	89	60.145	Amphiprion_percula
ENSGALG00000008765	C1D	96	63.043	ENSATEG00000012922	c1d	89	63.043	Anabas_testudineus
ENSGALG00000008765	C1D	97	91.549	ENSAPLG00000009320	C1D	98	91.549	Anas_platyrhynchos
ENSGALG00000008765	C1D	85	88.525	ENSACAG00000001337	C1D	100	88.525	Anolis_carolinensis
ENSGALG00000008765	C1D	89	78.906	ENSANAG00000005773	-	90	78.906	Aotus_nancymaae
ENSGALG00000008765	C1D	89	82.031	ENSANAG00000035972	-	90	82.031	Aotus_nancymaae
ENSGALG00000008765	C1D	86	66.935	ENSACLG00000026206	c1d	84	66.142	Astatotilapia_calliptera
ENSGALG00000008765	C1D	99	67.123	ENSAMXG00000043212	c1d	100	67.123	Astyanax_mexicanus
ENSGALG00000008765	C1D	89	82.031	ENSBTAG00000049002	C1D	90	82.031	Bos_taurus
ENSGALG00000008765	C1D	89	81.250	ENSCJAG00000006589	C1D	84	81.250	Callithrix_jacchus
ENSGALG00000008765	C1D	80	72.174	ENSCJAG00000044668	-	89	72.174	Callithrix_jacchus
ENSGALG00000008765	C1D	89	82.812	ENSCAFG00000030099	C1D	90	82.812	Canis_familiaris
ENSGALG00000008765	C1D	89	82.812	ENSCAFG00020026997	C1D	90	82.812	Canis_lupus_dingo
ENSGALG00000008765	C1D	97	78.417	ENSCHIG00000025729	C1D	96	78.417	Capra_hircus
ENSGALG00000008765	C1D	89	82.031	ENSTSYG00000035739	-	90	82.031	Carlito_syrichta
ENSGALG00000008765	C1D	80	79.130	ENSTSYG00000026573	-	73	79.130	Carlito_syrichta
ENSGALG00000008765	C1D	78	69.912	ENSCAPG00000011523	-	94	69.912	Cavia_aperea
ENSGALG00000008765	C1D	78	70.796	ENSCPOG00000020112	-	94	70.796	Cavia_porcellus
ENSGALG00000008765	C1D	89	80.469	ENSCPOG00000037986	-	90	80.469	Cavia_porcellus
ENSGALG00000008765	C1D	89	81.250	ENSCCAG00000030405	-	90	81.250	Cebus_capucinus
ENSGALG00000008765	C1D	89	81.250	ENSCATG00000045336	C1D	90	81.250	Cercocebus_atys
ENSGALG00000008765	C1D	89	79.688	ENSCATG00000043348	-	90	79.688	Cercocebus_atys
ENSGALG00000008765	C1D	90	79.845	ENSCLAG00000011883	C1D	91	79.845	Chinchilla_lanigera
ENSGALG00000008765	C1D	89	81.250	ENSCSAG00000014811	C1D	90	81.250	Chlorocebus_sabaeus
ENSGALG00000008765	C1D	96	76.978	ENSCHOG00000006719	C1D	77	76.978	Choloepus_hoffmanni
ENSGALG00000008765	C1D	100	82.432	ENSCPBG00000014451	C1D	100	82.432	Chrysemys_picta_bellii
ENSGALG00000008765	C1D	81	48.276	ENSCING00000020906	-	61	47.863	Ciona_intestinalis
ENSGALG00000008765	C1D	86	51.613	ENSCSAVG00000000150	-	69	51.613	Ciona_savignyi
ENSGALG00000008765	C1D	89	81.250	ENSCANG00000035564	C1D	90	81.250	Colobus_angolensis_palliatus
ENSGALG00000008765	C1D	85	70.492	ENSCANG00000036599	-	98	70.492	Colobus_angolensis_palliatus
ENSGALG00000008765	C1D	97	75.540	ENSCGRG00001023376	C1d	96	75.540	Cricetulus_griseus_chok1gshd
ENSGALG00000008765	C1D	97	75.540	ENSCGRG00000010245	C1d	96	75.540	Cricetulus_griseus_crigri
ENSGALG00000008765	C1D	98	58.865	ENSCSEG00000000587	c1d	99	58.865	Cynoglossus_semilaevis
ENSGALG00000008765	C1D	96	61.594	ENSCVAG00000004603	c1d	89	61.594	Cyprinodon_variegatus
ENSGALG00000008765	C1D	85	70.732	ENSDARG00000021112	c1d	85	69.048	Danio_rerio
ENSGALG00000008765	C1D	89	74.219	ENSDNOG00000046068	-	90	74.219	Dasypus_novemcinctus
ENSGALG00000008765	C1D	86	83.065	ENSDORG00000003300	C1d	87	83.065	Dipodomys_ordii
ENSGALG00000008765	C1D	57	87.805	ENSETEG00000014857	C1D	86	87.805	Echinops_telfairi
ENSGALG00000008765	C1D	88	57.480	ENSEBUG00000006874	c1d	80	57.480	Eptatretus_burgeri
ENSGALG00000008765	C1D	89	82.031	ENSEASG00005007307	C1D	82	82.031	Equus_asinus_asinus
ENSGALG00000008765	C1D	96	77.536	ENSECAG00000002187	C1D	98	77.536	Equus_caballus
ENSGALG00000008765	C1D	87	68.800	ENSELUG00000014823	c1d	86	68.800	Esox_lucius
ENSGALG00000008765	C1D	89	82.031	ENSFCAG00000028933	C1D	90	82.031	Felis_catus
ENSGALG00000008765	C1D	99	86.897	ENSFALG00000013640	C1D	88	86.897	Ficedula_albicollis
ENSGALG00000008765	C1D	89	62.791	ENSFDAG00000014175	-	89	62.791	Fukomys_damarensis
ENSGALG00000008765	C1D	86	82.258	ENSFDAG00000010462	-	87	82.258	Fukomys_damarensis
ENSGALG00000008765	C1D	87	68.800	ENSFHEG00000010545	c1d	87	68.800	Fundulus_heteroclitus
ENSGALG00000008765	C1D	82	63.559	ENSGMOG00000013911	-	94	63.559	Gadus_morhua
ENSGALG00000008765	C1D	83	67.227	ENSGAFG00000012578	c1d	76	67.227	Gambusia_affinis
ENSGALG00000008765	C1D	88	66.667	ENSGACG00000011981	c1d	98	66.667	Gasterosteus_aculeatus
ENSGALG00000008765	C1D	92	84.962	ENSGAGG00000013383	C1D	100	80.405	Gopherus_agassizii
ENSGALG00000008765	C1D	89	80.469	ENSGGOG00000022296	-	90	80.469	Gorilla_gorilla
ENSGALG00000008765	C1D	89	81.250	ENSGGOG00000025982	-	71	81.250	Gorilla_gorilla
ENSGALG00000008765	C1D	97	74.101	ENSGGOG00000025808	-	79	74.101	Gorilla_gorilla
ENSGALG00000008765	C1D	83	67.500	ENSHBUG00000018531	c1d	74	66.667	Haplochromis_burtoni
ENSGALG00000008765	C1D	89	82.031	ENSHGLG00000012332	-	98	77.698	Heterocephalus_glaber_female
ENSGALG00000008765	C1D	90	68.992	ENSHGLG00000021219	-	91	68.992	Heterocephalus_glaber_female
ENSGALG00000008765	C1D	90	69.767	ENSHGLG00100019951	-	91	69.767	Heterocephalus_glaber_male
ENSGALG00000008765	C1D	89	81.250	ENSHGLG00100000221	-	90	81.250	Heterocephalus_glaber_male
ENSGALG00000008765	C1D	83	68.067	ENSHCOG00000014589	c1d	81	68.067	Hippocampus_comes
ENSGALG00000008765	C1D	83	68.067	ENSHCOG00000014568	C1D	81	68.067	Hippocampus_comes
ENSGALG00000008765	C1D	99	57.931	ENSIPUG00000018661	c1d	100	57.931	Ictalurus_punctatus
ENSGALG00000008765	C1D	88	81.890	ENSSTOG00000012346	C1D	89	81.890	Ictidomys_tridecemlineatus
ENSGALG00000008765	C1D	95	67.883	ENSJJAG00000005044	-	99	67.883	Jaculus_jaculus
ENSGALG00000008765	C1D	96	70.290	ENSJJAG00000009540	-	100	70.290	Jaculus_jaculus
ENSGALG00000008765	C1D	95	62.774	ENSJJAG00000016086	-	98	62.774	Jaculus_jaculus
ENSGALG00000008765	C1D	86	70.312	ENSJJAG00000023186	-	97	70.312	Jaculus_jaculus
ENSGALG00000008765	C1D	87	68.000	ENSKMAG00000015077	c1d	81	68.000	Kryptolebias_marmoratus
ENSGALG00000008765	C1D	96	63.043	ENSLBEG00000008351	c1d	89	63.043	Labrus_bergylta
ENSGALG00000008765	C1D	97	74.468	ENSLACG00000007516	C1D	95	74.468	Latimeria_chalumnae
ENSGALG00000008765	C1D	97	71.528	ENSLOCG00000016024	c1d	98	71.528	Lepisosteus_oculatus
ENSGALG00000008765	C1D	89	82.812	ENSLAFG00000002083	C1D	90	82.812	Loxodonta_africana
ENSGALG00000008765	C1D	89	81.250	ENSMFAG00000034261	C1D	90	81.250	Macaca_fascicularis
ENSGALG00000008765	C1D	89	79.688	ENSMFAG00000028681	-	90	79.688	Macaca_fascicularis
ENSGALG00000008765	C1D	89	78.906	ENSMFAG00000034034	-	90	78.906	Macaca_fascicularis
ENSGALG00000008765	C1D	89	81.250	ENSMMUG00000041557	C1D	91	81.250	Macaca_mulatta
ENSGALG00000008765	C1D	89	78.125	ENSMMUG00000043184	-	90	78.125	Macaca_mulatta
ENSGALG00000008765	C1D	89	78.906	ENSMMUG00000017209	-	90	78.906	Macaca_mulatta
ENSGALG00000008765	C1D	89	78.906	ENSMNEG00000020626	-	90	78.906	Macaca_nemestrina
ENSGALG00000008765	C1D	89	81.250	ENSMNEG00000040612	C1D	90	81.250	Macaca_nemestrina
ENSGALG00000008765	C1D	89	81.250	ENSMLEG00000027619	C1D	90	81.250	Mandrillus_leucophaeus
ENSGALG00000008765	C1D	89	79.688	ENSMLEG00000028412	-	90	79.688	Mandrillus_leucophaeus
ENSGALG00000008765	C1D	86	66.129	ENSMAMG00000022156	c1d	80	66.129	Mastacembelus_armatus
ENSGALG00000008765	C1D	85	66.393	ENSMZEG00005027343	c1d	82	68.333	Maylandia_zebra
ENSGALG00000008765	C1D	99	96.479	ENSMGAG00000004517	C1D	100	96.479	Meleagris_gallopavo
ENSGALG00000008765	C1D	97	75.540	ENSMAUG00000008974	C1d	96	75.540	Mesocricetus_auratus
ENSGALG00000008765	C1D	89	82.031	ENSMICG00000032141	C1D	90	82.031	Microcebus_murinus
ENSGALG00000008765	C1D	97	75.000	ENSMOCG00000010860	C1d	98	75.000	Microtus_ochrogaster
ENSGALG00000008765	C1D	97	64.029	ENSMMOG00000007332	c1d	98	56.944	Mola_mola
ENSGALG00000008765	C1D	96	79.710	ENSMODG00000003561	C1D	97	79.710	Monodelphis_domestica
ENSGALG00000008765	C1D	87	66.400	ENSMALG00000020864	c1d	96	65.079	Monopterus_albus
ENSGALG00000008765	C1D	97	74.820	MGP_CAROLIEiJ_G0016110	C1d	98	79.487	Mus_caroli
ENSGALG00000008765	C1D	97	74.820	ENSMUSG00000000581	C1d	98	79.487	Mus_musculus
ENSGALG00000008765	C1D	97	76.259	MGP_PahariEiJ_G0016781	C1d	98	80.342	Mus_pahari
ENSGALG00000008765	C1D	97	74.820	MGP_SPRETEiJ_G0016952	C1d	98	79.487	Mus_spretus
ENSGALG00000008765	C1D	89	82.031	ENSMPUG00000006224	C1D	90	82.031	Mustela_putorius_furo
ENSGALG00000008765	C1D	97	75.887	ENSMLUG00000010791	-	100	75.887	Myotis_lucifugus
ENSGALG00000008765	C1D	97	73.759	ENSMLUG00000024947	-	100	73.759	Myotis_lucifugus
ENSGALG00000008765	C1D	97	74.468	ENSMLUG00000029990	-	100	74.468	Myotis_lucifugus
ENSGALG00000008765	C1D	76	75.455	ENSNGAG00000012482	-	87	75.455	Nannospalax_galili
ENSGALG00000008765	C1D	86	78.226	ENSNGAG00000011872	-	87	78.226	Nannospalax_galili
ENSGALG00000008765	C1D	86	73.387	ENSNGAG00000016675	-	87	73.387	Nannospalax_galili
ENSGALG00000008765	C1D	86	66.935	ENSNBRG00000010704	c1d	82	69.167	Neolamprologus_brichardi
ENSGALG00000008765	C1D	89	81.250	ENSNLEG00000032919	-	71	81.250	Nomascus_leucogenys
ENSGALG00000008765	C1D	97	77.698	ENSOPRG00000009586	C1D	98	77.698	Ochotona_princeps
ENSGALG00000008765	C1D	97	75.714	ENSODEG00000011242	-	99	75.714	Octodon_degus
ENSGALG00000008765	C1D	88	73.228	ENSODEG00000018525	-	89	73.228	Octodon_degus
ENSGALG00000008765	C1D	89	81.250	ENSODEG00000018885	-	91	81.250	Octodon_degus
ENSGALG00000008765	C1D	85	68.293	ENSONIG00000001233	c1d	84	67.460	Oreochromis_niloticus
ENSGALG00000008765	C1D	76	84.685	ENSOANG00000008385	C1D	100	85.586	Ornithorhynchus_anatinus
ENSGALG00000008765	C1D	89	82.031	ENSOCUG00000025587	-	90	82.031	Oryctolagus_cuniculus
ENSGALG00000008765	C1D	89	82.031	ENSOCUG00000009771	-	90	82.031	Oryctolagus_cuniculus
ENSGALG00000008765	C1D	92	64.394	ENSORLG00000021968	c1d	85	64.394	Oryzias_latipes
ENSGALG00000008765	C1D	92	64.394	ENSORLG00020000507	c1d	86	64.394	Oryzias_latipes_hni
ENSGALG00000008765	C1D	97	62.857	ENSORLG00015004594	c1d	89	62.857	Oryzias_latipes_hsok
ENSGALG00000008765	C1D	88	68.254	ENSOMEG00000004672	c1d	81	68.254	Oryzias_melastigma
ENSGALG00000008765	C1D	89	80.469	ENSOGAG00000027934	-	90	80.469	Otolemur_garnettii
ENSGALG00000008765	C1D	97	78.417	ENSOARG00000019931	C1D	96	78.417	Ovis_aries
ENSGALG00000008765	C1D	89	81.250	ENSPPAG00000037847	-	90	81.250	Pan_paniscus
ENSGALG00000008765	C1D	91	77.863	ENSPPAG00000040091	-	74	77.863	Pan_paniscus
ENSGALG00000008765	C1D	89	82.031	ENSPPRG00000017045	-	90	82.031	Panthera_pardus
ENSGALG00000008765	C1D	89	50.000	ENSPPRG00000022830	-	88	50.000	Panthera_pardus
ENSGALG00000008765	C1D	89	82.031	ENSPTIG00000009414	C1D	90	82.031	Panthera_tigris_altaica
ENSGALG00000008765	C1D	89	81.250	ENSPTRG00000023558	C1D	90	81.250	Pan_troglodytes
ENSGALG00000008765	C1D	89	81.250	ENSPANG00000002886	C1D	71	81.250	Papio_anubis
ENSGALG00000008765	C1D	89	78.906	ENSPANG00000000501	-	90	78.906	Papio_anubis
ENSGALG00000008765	C1D	96	68.085	ENSPKIG00000004877	c1d	95	68.085	Paramormyrops_kingsleyae
ENSGALG00000008765	C1D	97	83.916	ENSPSIG00000010015	C1D	99	83.916	Pelodiscus_sinensis
ENSGALG00000008765	C1D	90	65.116	ENSPMGG00000009326	c1d	89	62.319	Periophthalmus_magnuspinnatus
ENSGALG00000008765	C1D	89	78.906	ENSPCIG00000006831	-	89	78.906	Phascolarctos_cinereus
ENSGALG00000008765	C1D	96	80.435	ENSPCIG00000018629	-	97	80.435	Phascolarctos_cinereus
ENSGALG00000008765	C1D	88	67.460	ENSPFOG00000003686	c1d	82	67.460	Poecilia_formosa
ENSGALG00000008765	C1D	88	67.460	ENSPLAG00000000228	c1d	89	67.460	Poecilia_latipinna
ENSGALG00000008765	C1D	88	67.460	ENSPMEG00000023213	c1d	82	67.460	Poecilia_mexicana
ENSGALG00000008765	C1D	88	68.254	ENSPREG00000000742	c1d	89	68.254	Poecilia_reticulata
ENSGALG00000008765	C1D	89	81.250	ENSPPYG00000012354	C1D	70	81.250	Pongo_abelii
ENSGALG00000008765	C1D	89	78.906	ENSPPYG00000002294	-	90	78.906	Pongo_abelii
ENSGALG00000008765	C1D	96	66.187	ENSPCAG00000010088	C1D	77	66.187	Procavia_capensis
ENSGALG00000008765	C1D	89	82.031	ENSPCOG00000016112	C1D	90	82.031	Propithecus_coquereli
ENSGALG00000008765	C1D	89	81.250	ENSPVAG00000012692	C1D	71	81.250	Pteropus_vampyrus
ENSGALG00000008765	C1D	85	67.200	ENSPNYG00000008789	c1d	84	66.406	Pundamilia_nyererei
ENSGALG00000008765	C1D	99	65.068	ENSPNAG00000004219	c1d	100	65.068	Pygocentrus_nattereri
ENSGALG00000008765	C1D	97	77.698	ENSRNOG00000005982	C1d	96	77.698	Rattus_norvegicus
ENSGALG00000008765	C1D	89	79.688	ENSRBIG00000026211	-	90	79.688	Rhinopithecus_bieti
ENSGALG00000008765	C1D	89	81.250	ENSRROG00000029013	C1D	90	81.250	Rhinopithecus_roxellana
ENSGALG00000008765	C1D	89	78.906	ENSRROG00000005944	-	90	78.906	Rhinopithecus_roxellana
ENSGALG00000008765	C1D	89	81.250	ENSSBOG00000025275	C1D	90	81.250	Saimiri_boliviensis_boliviensis
ENSGALG00000008765	C1D	96	78.261	ENSSHAG00000008352	C1D	66	78.261	Sarcophilus_harrisii
ENSGALG00000008765	C1D	96	64.493	ENSSFOG00015010861	c1d	99	64.493	Scleropages_formosus
ENSGALG00000008765	C1D	87	64.000	ENSSMAG00000019230	c1d	81	64.000	Scophthalmus_maximus
ENSGALG00000008765	C1D	96	63.043	ENSSDUG00000020213	c1d	89	63.043	Seriola_dumerili
ENSGALG00000008765	C1D	96	63.043	ENSSLDG00000017371	c1d	89	63.043	Seriola_lalandi_dorsalis
ENSGALG00000008765	C1D	90	84.615	ENSSPUG00000006525	C1D	100	80.822	Sphenodon_punctatus
ENSGALG00000008765	C1D	86	70.161	ENSSPAG00000008574	c1d	89	64.493	Stegastes_partitus
ENSGALG00000008765	C1D	78	65.487	ENSSSCG00000035701	-	93	65.487	Sus_scrofa
ENSGALG00000008765	C1D	89	81.250	ENSSSCG00000039331	-	90	81.250	Sus_scrofa
ENSGALG00000008765	C1D	96	87.050	ENSTGUG00000002367	C1D	97	87.050	Taeniopygia_guttata
ENSGALG00000008765	C1D	92	61.364	ENSTRUG00000012245	c1d	80	61.364	Takifugu_rubripes
ENSGALG00000008765	C1D	92	59.848	ENSTNIG00000009827	c1d	89	59.848	Tetraodon_nigroviridis
ENSGALG00000008765	C1D	89	82.031	ENSTBEG00000009797	C1D	90	82.031	Tupaia_belangeri
ENSGALG00000008765	C1D	89	81.250	ENSTTRG00000013982	C1D	73	81.250	Tursiops_truncatus
ENSGALG00000008765	C1D	89	67.939	ENSUAMG00000025246	C1D	89	67.939	Ursus_americanus
ENSGALG00000008765	C1D	89	82.031	ENSUMAG00000021118	-	90	82.031	Ursus_maritimus
ENSGALG00000008765	C1D	69	63.725	ENSUMAG00000006451	-	89	63.717	Ursus_maritimus
ENSGALG00000008765	C1D	89	80.469	ENSVPAG00000012080	C1D	71	80.469	Vicugna_pacos
ENSGALG00000008765	C1D	89	82.812	ENSVVUG00000027629	C1D	79	82.812	Vulpes_vulpes
ENSGALG00000008765	C1D	96	72.340	ENSXETG00000025934	c1d	97	72.340	Xenopus_tropicalis
ENSGALG00000008765	C1D	88	65.873	ENSXCOG00000013813	c1d	82	65.873	Xiphophorus_couchianus
ENSGALG00000008765	C1D	88	65.079	ENSXMAG00000022273	c1d	82	65.079	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005730	nucleolus	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0006364	rRNA processing	-	IEA	Process