EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000008794 (Gene tree)
Gene ID: 420530
Gene Symbol: RPP38
Alias: -
Full Name: Gallus gallus ribonuclease P/MRP subunit p38 (RPP38)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 3141 bases
Position: chr2:20616815-20619955
Accession: NM_001199590
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000014282	Ribosomal_L7Ae	PF01248.26	6.8e-08	1	1
ENSGALP00000066708	Ribosomal_L7Ae	PF01248.26	6.8e-08	1	1
ENSGALP00000069635	Ribosomal_L7Ae	PF01248.26	8.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000090599	-	1253	XM_025147186	ENSGALP00000069635	332 (aa)	XP_025002954	UPI000D6406DA
ENSGALT00000107434	-	1258	-	ENSGALP00000066708	293 (aa)	XP_015136874	UPI00004478C8
ENSGALT00000014298	-	1353	-	ENSGALP00000014282	293 (aa)	XP_015136874	F1NRK3

Gene Model

Click here to download ENSGALG00000008794's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03008	Ribosome biogenesis in eukaryotes	KEGG
gga03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000008794's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000008794	RPP38	92	51.439	ENSG00000152464	RPP38	95	55.625	Homo_sapiens
ENSGALG00000008794	RPP38	86	44.106	ENSAPOG00000001240	rpp38	90	44.106	Acanthochromis_polyacanthus
ENSGALG00000008794	RPP38	92	52.555	ENSAMEG00000018832	RPP38	92	51.894	Ailuropoda_melanoleuca
ENSGALG00000008794	RPP38	86	41.667	ENSACIG00000011592	rpp38	95	42.125	Amphilophus_citrinellus
ENSGALG00000008794	RPP38	86	43.478	ENSAOCG00000017293	rpp38	91	43.478	Amphiprion_ocellaris
ENSGALG00000008794	RPP38	86	46.304	ENSAPEG00000002315	rpp38	90	46.304	Amphiprion_percula
ENSGALG00000008794	RPP38	86	43.295	ENSATEG00000000731	rpp38	92	43.678	Anabas_testudineus
ENSGALG00000008794	RPP38	95	83.094	ENSAPLG00000002054	RPP38	99	83.094	Anas_platyrhynchos
ENSGALG00000008794	RPP38	86	41.379	ENSACLG00000016958	rpp38	91	42.529	Astatotilapia_calliptera
ENSGALG00000008794	RPP38	86	41.379	ENSACLG00000016962	rpp38	91	42.529	Astatotilapia_calliptera
ENSGALG00000008794	RPP38	85	42.745	ENSAMXG00000025023	rpp38	92	42.007	Astyanax_mexicanus
ENSGALG00000008794	RPP38	93	49.275	ENSBTAG00000007702	RPP38	92	50.379	Bos_taurus
ENSGALG00000008794	RPP38	92	51.460	ENSCAFG00000024373	RPP38	92	50.758	Canis_familiaris
ENSGALG00000008794	RPP38	92	51.460	ENSCAFG00020008008	RPP38	92	50.758	Canis_lupus_dingo
ENSGALG00000008794	RPP38	93	49.275	ENSCHIG00000012484	RPP38	92	50.379	Capra_hircus
ENSGALG00000008794	RPP38	92	52.555	ENSCPOG00000003981	RPP38	92	51.894	Cavia_porcellus
ENSGALG00000008794	RPP38	92	53.285	ENSCLAG00000010194	RPP38	92	52.652	Chinchilla_lanigera
ENSGALG00000008794	RPP38	87	49.421	ENSCSAG00000019055	RPP38	92	50.190	Chlorocebus_sabaeus
ENSGALG00000008794	RPP38	92	54.745	ENSCHOG00000004335	RPP38	92	54.545	Choloepus_hoffmanni
ENSGALG00000008794	RPP38	91	49.259	ENSCGRG00001001395	Rpp38	91	48.649	Cricetulus_griseus_chok1gshd
ENSGALG00000008794	RPP38	91	49.259	ENSCGRG00000017441	Rpp38	91	48.649	Cricetulus_griseus_crigri
ENSGALG00000008794	RPP38	86	43.346	ENSCSEG00000001721	rpp38	91	44.015	Cynoglossus_semilaevis
ENSGALG00000008794	RPP38	86	44.280	ENSCVAG00000001676	rpp38	90	44.280	Cyprinodon_variegatus
ENSGALG00000008794	RPP38	86	43.478	ENSDARG00000040350	rpp38	92	41.603	Danio_rerio
ENSGALG00000008794	RPP38	92	50.719	ENSDNOG00000040314	RPP38	92	50.746	Dasypus_novemcinctus
ENSGALG00000008794	RPP38	94	48.913	ENSDORG00000009783	Rpp38	93	48.679	Dipodomys_ordii
ENSGALG00000008794	RPP38	93	51.439	ENSETEG00000002839	RPP38	94	51.119	Echinops_telfairi
ENSGALG00000008794	RPP38	93	51.429	ENSEASG00005019783	RPP38	93	50.929	Equus_asinus_asinus
ENSGALG00000008794	RPP38	93	50.719	ENSEEUG00000014677	RPP38	92	50.943	Erinaceus_europaeus
ENSGALG00000008794	RPP38	89	42.456	ENSELUG00000010160	rpp38	96	42.456	Esox_lucius
ENSGALG00000008794	RPP38	92	51.648	ENSFCAG00000022449	RPP38	92	50.951	Felis_catus
ENSGALG00000008794	RPP38	98	76.042	ENSFALG00000014804	RPP38	100	75.779	Ficedula_albicollis
ENSGALG00000008794	RPP38	92	53.650	ENSFDAG00000018669	RPP38	92	53.030	Fukomys_damarensis
ENSGALG00000008794	RPP38	86	41.852	ENSFHEG00000013741	rpp38	91	43.321	Fundulus_heteroclitus
ENSGALG00000008794	RPP38	51	45.455	ENSGACG00000009258	rpp38	91	45.455	Gasterosteus_aculeatus
ENSGALG00000008794	RPP38	86	41.379	ENSHBUG00000010937	rpp38	91	42.529	Haplochromis_burtoni
ENSGALG00000008794	RPP38	92	53.285	ENSHGLG00000012144	RPP38	92	52.652	Heterocephalus_glaber_female
ENSGALG00000008794	RPP38	85	41.365	ENSIPUG00000022879	rpp38	90	42.412	Ictalurus_punctatus
ENSGALG00000008794	RPP38	91	51.273	ENSSTOG00000025699	RPP38	89	50.758	Ictidomys_tridecemlineatus
ENSGALG00000008794	RPP38	91	51.103	ENSJJAG00000007523	Rpp38	91	50.575	Jaculus_jaculus
ENSGALG00000008794	RPP38	86	44.106	ENSKMAG00000003986	rpp38	89	44.106	Kryptolebias_marmoratus
ENSGALG00000008794	RPP38	89	42.751	ENSLBEG00000006853	rpp38	94	42.537	Labrus_bergylta
ENSGALG00000008794	RPP38	89	45.455	ENSLACG00000006502	RPP38	93	45.455	Latimeria_chalumnae
ENSGALG00000008794	RPP38	90	44.803	ENSLOCG00000018347	rpp38	91	47.015	Lepisosteus_oculatus
ENSGALG00000008794	RPP38	92	51.087	ENSLAFG00000000509	RPP38	93	50.376	Loxodonta_africana
ENSGALG00000008794	RPP38	87	49.035	ENSMMUG00000007679	RPP38	92	49.810	Macaca_mulatta
ENSGALG00000008794	RPP38	86	46.008	ENSMAMG00000012774	rpp38	88	46.124	Mastacembelus_armatus
ENSGALG00000008794	RPP38	86	41.762	ENSMZEG00005003189	rpp38	91	42.912	Maylandia_zebra
ENSGALG00000008794	RPP38	86	41.379	ENSMZEG00005003200	rpp38	91	42.529	Maylandia_zebra
ENSGALG00000008794	RPP38	100	92.491	ENSMGAG00000008217	RPP38	100	92.491	Meleagris_gallopavo
ENSGALG00000008794	RPP38	91	47.037	ENSMAUG00000003644	Rpp38	91	48.263	Mesocricetus_auratus
ENSGALG00000008794	RPP38	91	50.549	ENSMOCG00000007020	Rpp38	91	50.000	Microtus_ochrogaster
ENSGALG00000008794	RPP38	86	41.154	ENSMMOG00000003446	rpp38	88	41.569	Mola_mola
ENSGALG00000008794	RPP38	89	57.252	ENSMODG00000024091	RPP38	93	57.252	Monodelphis_domestica
ENSGALG00000008794	RPP38	86	44.689	ENSMALG00000002356	rpp38	90	44.403	Monopterus_albus
ENSGALG00000008794	RPP38	91	49.815	MGP_CAROLIEiJ_G0023133	Rpp38	91	50.192	Mus_caroli
ENSGALG00000008794	RPP38	91	50.554	ENSMUSG00000049950	Rpp38	91	50.000	Mus_musculus
ENSGALG00000008794	RPP38	91	48.889	MGP_PahariEiJ_G0019193	Rpp38	91	48.263	Mus_pahari
ENSGALG00000008794	RPP38	91	50.000	MGP_SPRETEiJ_G0024051	Rpp38	91	49.421	Mus_spretus
ENSGALG00000008794	RPP38	92	52.190	ENSMPUG00000018523	RPP38	93	51.515	Mustela_putorius_furo
ENSGALG00000008794	RPP38	87	49.807	ENSMLUG00000002153	RPP38	92	51.894	Myotis_lucifugus
ENSGALG00000008794	RPP38	91	47.426	ENSNGAG00000011066	Rpp38	92	46.565	Nannospalax_galili
ENSGALG00000008794	RPP38	86	42.966	ENSNBRG00000006994	rpp38	91	43.346	Neolamprologus_brichardi
ENSGALG00000008794	RPP38	86	42.745	ENSONIG00000020467	rpp38	90	43.023	Oreochromis_niloticus
ENSGALG00000008794	RPP38	88	53.053	ENSOCUG00000024367	-	94	53.383	Oryctolagus_cuniculus
ENSGALG00000008794	RPP38	88	52.672	ENSOCUG00000022768	-	94	53.008	Oryctolagus_cuniculus
ENSGALG00000008794	RPP38	87	42.545	ENSORLG00000009219	rpp38	92	46.538	Oryzias_latipes
ENSGALG00000008794	RPP38	86	44.061	ENSORLG00020011503	rpp38	87	44.828	Oryzias_latipes_hni
ENSGALG00000008794	RPP38	86	44.961	ENSORLG00015017702	rpp38	87	45.736	Oryzias_latipes_hsok
ENSGALG00000008794	RPP38	84	44.664	ENSOMEG00000005414	rpp38	95	42.435	Oryzias_melastigma
ENSGALG00000008794	RPP38	92	52.381	ENSOGAG00000008059	RPP38	92	52.471	Otolemur_garnettii
ENSGALG00000008794	RPP38	93	49.638	ENSOARG00000004534	RPP38	92	50.758	Ovis_aries
ENSGALG00000008794	RPP38	92	52.158	ENSPPAG00000041577	RPP38	94	47.541	Pan_paniscus
ENSGALG00000008794	RPP38	92	51.648	ENSPPRG00000015329	RPP38	92	50.951	Panthera_pardus
ENSGALG00000008794	RPP38	92	51.648	ENSPTIG00000007188	RPP38	92	50.951	Panthera_tigris_altaica
ENSGALG00000008794	RPP38	92	52.158	ENSPTRG00000002318	RPP38	94	47.541	Pan_troglodytes
ENSGALG00000008794	RPP38	90	41.455	ENSPKIG00000025652	rpp38	94	41.577	Paramormyrops_kingsleyae
ENSGALG00000008794	RPP38	94	62.590	ENSPSIG00000001527	RPP38	94	62.406	Pelodiscus_sinensis
ENSGALG00000008794	RPP38	91	50.549	ENSPEMG00000008375	Rpp38	91	50.000	Peromyscus_maniculatus_bairdii
ENSGALG00000008794	RPP38	92	56.618	ENSPCIG00000009096	RPP38	88	56.107	Phascolarctos_cinereus
ENSGALG00000008794	RPP38	70	46.789	ENSPFOG00000016823	rpp38	92	48.058	Poecilia_formosa
ENSGALG00000008794	RPP38	88	44.074	ENSPLAG00000007626	rpp38	89	45.769	Poecilia_latipinna
ENSGALG00000008794	RPP38	84	42.353	ENSPMEG00000020392	rpp38	88	43.191	Poecilia_mexicana
ENSGALG00000008794	RPP38	88	45.522	ENSPREG00000017744	rpp38	91	47.287	Poecilia_reticulata
ENSGALG00000008794	RPP38	92	51.079	ENSPPYG00000002113	RPP38	92	50.758	Pongo_abelii
ENSGALG00000008794	RPP38	87	51.341	ENSPVAG00000007155	RPP38	92	52.453	Pteropus_vampyrus
ENSGALG00000008794	RPP38	86	41.762	ENSPNYG00000004293	rpp38	91	42.912	Pundamilia_nyererei
ENSGALG00000008794	RPP38	85	41.935	ENSPNAG00000010633	rpp38	92	41.473	Pygocentrus_nattereri
ENSGALG00000008794	RPP38	91	50.186	ENSRNOG00000038025	Rpp38	92	49.615	Rattus_norvegicus
ENSGALG00000008794	RPP38	92	58.088	ENSSHAG00000015529	RPP38	93	57.634	Sarcophilus_harrisii
ENSGALG00000008794	RPP38	86	44.231	ENSSMAG00000018276	rpp38	88	44.706	Scophthalmus_maximus
ENSGALG00000008794	RPP38	84	43.874	ENSSDUG00000001651	rpp38	90	46.245	Seriola_dumerili
ENSGALG00000008794	RPP38	84	45.238	ENSSLDG00000014355	rpp38	90	44.622	Seriola_lalandi_dorsalis
ENSGALG00000008794	RPP38	92	43.704	ENSSARG00000012099	RPP38	90	42.636	Sorex_araneus
ENSGALG00000008794	RPP38	91	57.778	ENSSPUG00000008560	-	92	57.308	Sphenodon_punctatus
ENSGALG00000008794	RPP38	94	60.432	ENSSPUG00000018363	-	94	60.448	Sphenodon_punctatus
ENSGALG00000008794	RPP38	94	60.432	ENSSPUG00000005237	-	94	60.075	Sphenodon_punctatus
ENSGALG00000008794	RPP38	86	45.560	ENSSPAG00000020387	rpp38	90	45.560	Stegastes_partitus
ENSGALG00000008794	RPP38	93	50.179	ENSSSCG00000027110	RPP38	92	49.438	Sus_scrofa
ENSGALG00000008794	RPP38	95	77.143	ENSTGUG00000001366	RPP38	100	77.143	Taeniopygia_guttata
ENSGALG00000008794	RPP38	84	43.651	ENSTNIG00000001334	rpp38	89	43.651	Tetraodon_nigroviridis
ENSGALG00000008794	RPP38	93	52.347	ENSTTRG00000004420	RPP38	92	51.698	Tursiops_truncatus
ENSGALG00000008794	RPP38	92	51.825	ENSUAMG00000002618	RPP38	92	51.515	Ursus_americanus
ENSGALG00000008794	RPP38	92	51.449	ENSUMAG00000012382	RPP38	92	51.504	Ursus_maritimus
ENSGALG00000008794	RPP38	92	51.460	ENSVVUG00000005272	RPP38	92	50.758	Vulpes_vulpes
ENSGALG00000008794	RPP38	88	48.120	ENSXETG00000003419	rpp38	93	48.120	Xenopus_tropicalis