EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000008857 (Gene tree)
Gene ID: 417270
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 8087 bases
Position: chr17:1836504-1844590
Accession: 417270
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000014372	PRP4	PF08799.11	4.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000014388	PRPF4-201	2144	XM_415544	ENSGALP00000014372	537 (aa)	XP_415544	F1NNQ9

Gene Model

Click here to download ENSGALG00000008857's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000008857's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000008857	PRPF4	96	89.669	ENSG00000136875	PRPF4	98	90.020	Homo_sapiens
ENSGALG00000008857	PRPF4	94	77.755	ENSAPOG00000014132	prpf4	98	77.755	Acanthochromis_polyacanthus
ENSGALG00000008857	PRPF4	96	89.535	ENSAMEG00000013048	PRPF4	96	90.215	Ailuropoda_melanoleuca
ENSGALG00000008857	PRPF4	94	77.515	ENSACIG00000005579	prpf4	99	77.515	Amphilophus_citrinellus
ENSGALG00000008857	PRPF4	94	76.378	ENSAOCG00000005457	prpf4	99	76.378	Amphiprion_ocellaris
ENSGALG00000008857	PRPF4	94	76.181	ENSAPEG00000000776	prpf4	99	76.181	Amphiprion_percula
ENSGALG00000008857	PRPF4	94	76.529	ENSATEG00000023013	prpf4	99	76.529	Anabas_testudineus
ENSGALG00000008857	PRPF4	97	96.952	ENSAPLG00000006534	PRPF4	98	96.952	Anas_platyrhynchos
ENSGALG00000008857	PRPF4	95	91.406	ENSACAG00000015110	PRPF4	98	91.406	Anolis_carolinensis
ENSGALG00000008857	PRPF4	97	88.528	ENSANAG00000022464	PRPF4	94	90.215	Aotus_nancymaae
ENSGALG00000008857	PRPF4	94	76.726	ENSACLG00000019031	prpf4	99	76.726	Astatotilapia_calliptera
ENSGALG00000008857	PRPF4	94	62.069	ENSAMXG00000006756	prpf4	99	73.123	Astyanax_mexicanus
ENSGALG00000008857	PRPF4	95	90.215	ENSBTAG00000004571	PRPF4	98	90.215	Bos_taurus
ENSGALG00000008857	PRPF4	88	44.632	WBGene00007972	prp-4	96	44.632	Caenorhabditis_elegans
ENSGALG00000008857	PRPF4	96	89.864	ENSCJAG00000017856	PRPF4	98	90.215	Callithrix_jacchus
ENSGALG00000008857	PRPF4	96	89.535	ENSCAFG00000003224	PRPF4	95	90.215	Canis_familiaris
ENSGALG00000008857	PRPF4	96	89.535	ENSCAFG00020022637	PRPF4	98	90.215	Canis_lupus_dingo
ENSGALG00000008857	PRPF4	96	89.362	ENSCHIG00000024648	-	98	90.215	Capra_hircus
ENSGALG00000008857	PRPF4	99	87.947	ENSTSYG00000010366	PRPF4	98	90.020	Carlito_syrichta
ENSGALG00000008857	PRPF4	76	83.942	ENSCAPG00000008935	PRPF4	97	82.578	Cavia_aperea
ENSGALG00000008857	PRPF4	96	83.721	ENSCPOG00000014729	-	98	84.344	Cavia_porcellus
ENSGALG00000008857	PRPF4	96	89.147	ENSCPOG00000010747	-	98	89.824	Cavia_porcellus
ENSGALG00000008857	PRPF4	100	87.013	ENSCCAG00000028990	PRPF4	98	90.411	Cebus_capucinus
ENSGALG00000008857	PRPF4	93	91.417	ENSCATG00000021552	PRPF4	98	90.215	Cercocebus_atys
ENSGALG00000008857	PRPF4	96	89.341	ENSCLAG00000013448	PRPF4	98	90.020	Chinchilla_lanigera
ENSGALG00000008857	PRPF4	84	90.487	ENSCHOG00000007233	PRPF4	100	90.487	Choloepus_hoffmanni
ENSGALG00000008857	PRPF4	98	90.702	ENSCPBG00000019136	PRPF4	78	89.074	Chrysemys_picta_bellii
ENSGALG00000008857	PRPF4	91	58.954	ENSCING00000001299	-	95	58.954	Ciona_intestinalis
ENSGALG00000008857	PRPF4	91	59.312	ENSCSAVG00000009178	-	99	59.957	Ciona_savignyi
ENSGALG00000008857	PRPF4	98	88.091	ENSCANG00000003246	PRPF4	98	90.215	Colobus_angolensis_palliatus
ENSGALG00000008857	PRPF4	96	89.147	ENSCGRG00001016992	Prpf4	98	89.824	Cricetulus_griseus_chok1gshd
ENSGALG00000008857	PRPF4	96	89.147	ENSCGRG00000017560	Prpf4	98	89.824	Cricetulus_griseus_crigri
ENSGALG00000008857	PRPF4	94	76.832	ENSCSEG00000020451	prpf4	99	76.832	Cynoglossus_semilaevis
ENSGALG00000008857	PRPF4	94	79.842	ENSDARG00000067639	prpf4	99	79.842	Danio_rerio
ENSGALG00000008857	PRPF4	97	88.697	ENSDNOG00000013203	PRPF4	98	90.177	Dasypus_novemcinctus
ENSGALG00000008857	PRPF4	96	89.535	ENSDORG00000026275	Prpf4	98	90.215	Dipodomys_ordii
ENSGALG00000008857	PRPF4	85	56.957	FBgn0036733	U4-U6-60K	99	50.814	Drosophila_melanogaster
ENSGALG00000008857	PRPF4	98	87.619	ENSETEG00000020389	PRPF4	98	89.453	Echinops_telfairi
ENSGALG00000008857	PRPF4	94	71.946	ENSEBUG00000015229	prpf4	88	72.624	Eptatretus_burgeri
ENSGALG00000008857	PRPF4	96	89.535	ENSEASG00005022678	PRPF4	98	90.215	Equus_asinus_asinus
ENSGALG00000008857	PRPF4	96	89.535	ENSECAG00000007072	PRPF4	98	90.215	Equus_caballus
ENSGALG00000008857	PRPF4	82	92.887	ENSEEUG00000007480	PRPF4	97	70.852	Erinaceus_europaeus
ENSGALG00000008857	PRPF4	94	80.632	ENSELUG00000007510	prpf4	99	80.632	Esox_lucius
ENSGALG00000008857	PRPF4	96	89.864	ENSFCAG00000005514	PRPF4	98	90.215	Felis_catus
ENSGALG00000008857	PRPF4	96	96.882	ENSFALG00000005423	PRPF4	90	93.869	Ficedula_albicollis
ENSGALG00000008857	PRPF4	96	89.535	ENSFDAG00000005839	PRPF4	98	90.215	Fukomys_damarensis
ENSGALG00000008857	PRPF4	94	76.726	ENSFHEG00000001300	prpf4	99	76.726	Fundulus_heteroclitus
ENSGALG00000008857	PRPF4	60	72.699	ENSGAFG00000012164	prpf4	67	72.699	Gambusia_affinis
ENSGALG00000008857	PRPF4	94	69.685	ENSGACG00000015476	prpf4	99	69.685	Gasterosteus_aculeatus
ENSGALG00000008857	PRPF4	100	89.815	ENSGAGG00000025029	PRPF4	100	89.259	Gopherus_agassizii
ENSGALG00000008857	PRPF4	98	88.091	ENSGGOG00000006943	PRPF4	98	90.020	Gorilla_gorilla
ENSGALG00000008857	PRPF4	94	76.529	ENSHBUG00000000562	prpf4	99	76.529	Haplochromis_burtoni
ENSGALG00000008857	PRPF4	95	72.603	ENSHGLG00000003838	-	98	72.603	Heterocephalus_glaber_female
ENSGALG00000008857	PRPF4	90	78.439	ENSHGLG00000016628	-	95	79.261	Heterocephalus_glaber_female
ENSGALG00000008857	PRPF4	96	89.341	ENSHGLG00000015191	PRPF4	98	90.020	Heterocephalus_glaber_female
ENSGALG00000008857	PRPF4	95	72.603	ENSHGLG00100005571	-	98	72.603	Heterocephalus_glaber_male
ENSGALG00000008857	PRPF4	94	79.249	ENSIPUG00000017956	PRPF4	99	79.249	Ictalurus_punctatus
ENSGALG00000008857	PRPF4	95	89.804	ENSSTOG00000027833	PRPF4	98	89.804	Ictidomys_tridecemlineatus
ENSGALG00000008857	PRPF4	96	89.341	ENSJJAG00000008838	Prpf4	98	90.020	Jaculus_jaculus
ENSGALG00000008857	PRPF4	94	76.529	ENSKMAG00000013236	prpf4	99	76.529	Kryptolebias_marmoratus
ENSGALG00000008857	PRPF4	94	76.436	ENSLBEG00000020611	prpf4	99	76.436	Labrus_bergylta
ENSGALG00000008857	PRPF4	95	79.883	ENSLACG00000016317	PRPF4	98	79.883	Latimeria_chalumnae
ENSGALG00000008857	PRPF4	94	81.028	ENSLOCG00000000581	prpf4	99	81.028	Lepisosteus_oculatus
ENSGALG00000008857	PRPF4	96	89.060	ENSLAFG00000018225	PRPF4	98	90.373	Loxodonta_africana
ENSGALG00000008857	PRPF4	93	91.218	ENSMFAG00000039397	PRPF4	98	90.020	Macaca_fascicularis
ENSGALG00000008857	PRPF4	93	91.417	ENSMMUG00000005844	PRPF4	98	90.215	Macaca_mulatta
ENSGALG00000008857	PRPF4	93	81.038	ENSMNEG00000033737	PRPF4	98	80.039	Macaca_nemestrina
ENSGALG00000008857	PRPF4	93	91.417	ENSMLEG00000040284	PRPF4	98	90.215	Mandrillus_leucophaeus
ENSGALG00000008857	PRPF4	94	76.134	ENSMAMG00000020141	prpf4	99	76.134	Mastacembelus_armatus
ENSGALG00000008857	PRPF4	94	76.726	ENSMZEG00005023205	prpf4	99	76.726	Maylandia_zebra
ENSGALG00000008857	PRPF4	96	98.643	ENSMGAG00000001796	PRPF4	96	98.643	Meleagris_gallopavo
ENSGALG00000008857	PRPF4	95	89.804	ENSMAUG00000018022	Prpf4	98	89.804	Mesocricetus_auratus
ENSGALG00000008857	PRPF4	96	89.669	ENSMICG00000015022	PRPF4	98	90.196	Microcebus_murinus
ENSGALG00000008857	PRPF4	96	88.760	ENSMOCG00000018273	Prpf4	98	89.432	Microtus_ochrogaster
ENSGALG00000008857	PRPF4	94	75.248	ENSMMOG00000021177	prpf4	99	75.248	Mola_mola
ENSGALG00000008857	PRPF4	97	88.314	ENSMODG00000004444	-	98	89.432	Monodelphis_domestica
ENSGALG00000008857	PRPF4	97	88.314	ENSMODG00000025096	-	95	89.432	Monodelphis_domestica
ENSGALG00000008857	PRPF4	94	77.120	ENSMALG00000013624	prpf4	99	77.120	Monopterus_albus
ENSGALG00000008857	PRPF4	96	89.147	MGP_CAROLIEiJ_G0026078	Prpf4	98	89.824	Mus_caroli
ENSGALG00000008857	PRPF4	96	89.147	ENSMUSG00000066148	Prpf4	98	89.824	Mus_musculus
ENSGALG00000008857	PRPF4	96	88.953	MGP_PahariEiJ_G0028413	Prpf4	98	89.628	Mus_pahari
ENSGALG00000008857	PRPF4	96	89.147	MGP_SPRETEiJ_G0027042	Prpf4	98	89.824	Mus_spretus
ENSGALG00000008857	PRPF4	96	89.535	ENSMPUG00000007883	PRPF4	98	90.215	Mustela_putorius_furo
ENSGALG00000008857	PRPF4	98	88.280	ENSMLUG00000015309	-	95	90.215	Myotis_lucifugus
ENSGALG00000008857	PRPF4	96	87.984	ENSMLUG00000008626	-	96	88.650	Myotis_lucifugus
ENSGALG00000008857	PRPF4	96	84.109	ENSNGAG00000000468	Prpf4	98	84.736	Nannospalax_galili
ENSGALG00000008857	PRPF4	94	76.923	ENSNBRG00000007972	prpf4	99	76.923	Neolamprologus_brichardi
ENSGALG00000008857	PRPF4	98	88.280	ENSNLEG00000016647	PRPF4	98	90.215	Nomascus_leucogenys
ENSGALG00000008857	PRPF4	95	89.628	ENSMEUG00000013256	PRPF4	99	89.628	Notamacropus_eugenii
ENSGALG00000008857	PRPF4	96	89.864	ENSOPRG00000005302	PRPF4	98	90.215	Ochotona_princeps
ENSGALG00000008857	PRPF4	96	89.535	ENSODEG00000018147	PRPF4	98	90.215	Octodon_degus
ENSGALG00000008857	PRPF4	94	76.726	ENSONIG00000012671	prpf4	99	76.726	Oreochromis_niloticus
ENSGALG00000008857	PRPF4	96	89.729	ENSOCUG00000005046	PRPF4	98	90.411	Oryctolagus_cuniculus
ENSGALG00000008857	PRPF4	94	75.644	ENSORLG00000019641	prpf4	99	75.644	Oryzias_latipes
ENSGALG00000008857	PRPF4	94	75.644	ENSORLG00020019438	prpf4	99	75.644	Oryzias_latipes_hni
ENSGALG00000008857	PRPF4	94	75.314	ENSOMEG00000020941	prpf4	99	75.314	Oryzias_melastigma
ENSGALG00000008857	PRPF4	100	82.682	ENSOGAG00000007802	PRPF4	96	85.910	Otolemur_garnettii
ENSGALG00000008857	PRPF4	98	88.425	ENSOARG00000006319	PRPF4	95	90.215	Ovis_aries
ENSGALG00000008857	PRPF4	98	88.091	ENSPPAG00000041797	PRPF4	98	90.020	Pan_paniscus
ENSGALG00000008857	PRPF4	96	89.535	ENSPPRG00000014360	PRPF4	98	90.215	Panthera_pardus
ENSGALG00000008857	PRPF4	96	89.535	ENSPTIG00000009574	PRPF4	98	90.215	Panthera_tigris_altaica
ENSGALG00000008857	PRPF4	98	88.091	ENSPTRG00000021274	PRPF4	98	90.020	Pan_troglodytes
ENSGALG00000008857	PRPF4	93	91.218	ENSPANG00000025776	PRPF4	94	90.020	Papio_anubis
ENSGALG00000008857	PRPF4	94	81.818	ENSPKIG00000017259	prpf4	99	81.818	Paramormyrops_kingsleyae
ENSGALG00000008857	PRPF4	95	92.172	ENSPSIG00000010713	PRPF4	90	92.172	Pelodiscus_sinensis
ENSGALG00000008857	PRPF4	94	57.963	ENSPMGG00000000997	prpf4	98	57.963	Periophthalmus_magnuspinnatus
ENSGALG00000008857	PRPF4	96	89.147	ENSPEMG00000024115	Prpf4	98	89.824	Peromyscus_maniculatus_bairdii
ENSGALG00000008857	PRPF4	95	89.628	ENSPCIG00000003821	PRPF4	99	89.628	Phascolarctos_cinereus
ENSGALG00000008857	PRPF4	94	69.863	ENSPFOG00000013524	prpf4	99	72.393	Poecilia_formosa
ENSGALG00000008857	PRPF4	80	71.077	ENSPLAG00000011620	prpf4	99	69.113	Poecilia_latipinna
ENSGALG00000008857	PRPF4	92	73.214	ENSPMEG00000006813	prpf4	99	73.214	Poecilia_mexicana
ENSGALG00000008857	PRPF4	95	89.980	ENSPCAG00000002561	PRPF4	99	89.980	Procavia_capensis
ENSGALG00000008857	PRPF4	95	90.196	ENSPCOG00000011975	PRPF4	98	90.196	Propithecus_coquereli
ENSGALG00000008857	PRPF4	96	86.550	ENSPVAG00000004708	PRPF4	98	86.888	Pteropus_vampyrus
ENSGALG00000008857	PRPF4	94	76.726	ENSPNYG00000008013	prpf4	99	76.726	Pundamilia_nyererei
ENSGALG00000008857	PRPF4	94	80.040	ENSPNAG00000000697	prpf4	99	80.040	Pygocentrus_nattereri
ENSGALG00000008857	PRPF4	96	88.953	ENSRNOG00000014777	Prpf4	98	89.628	Rattus_norvegicus
ENSGALG00000008857	PRPF4	98	88.091	ENSRBIG00000040221	PRPF4	98	90.215	Rhinopithecus_bieti
ENSGALG00000008857	PRPF4	98	88.091	ENSRROG00000040240	PRPF4	98	90.215	Rhinopithecus_roxellana
ENSGALG00000008857	PRPF4	97	88.697	ENSSHAG00000017658	PRPF4	98	89.824	Sarcophilus_harrisii
ENSGALG00000008857	PRPF4	94	83.004	ENSSFOG00015008963	prpf4	99	83.004	Scleropages_formosus
ENSGALG00000008857	PRPF4	94	76.331	ENSSMAG00000008889	prpf4	99	76.331	Scophthalmus_maximus
ENSGALG00000008857	PRPF4	94	73.767	ENSSDUG00000022083	prpf4	94	76.556	Seriola_dumerili
ENSGALG00000008857	PRPF4	94	73.663	ENSSLDG00000008115	prpf4	93	76.458	Seriola_lalandi_dorsalis
ENSGALG00000008857	PRPF4	100	88.641	ENSSPUG00000015582	PRPF4	100	88.641	Sphenodon_punctatus
ENSGALG00000008857	PRPF4	94	71.176	ENSSPAG00000011286	prpf4	99	71.176	Stegastes_partitus
ENSGALG00000008857	PRPF4	96	89.535	ENSSSCG00000024648	PRPF4	98	90.215	Sus_scrofa
ENSGALG00000008857	PRPF4	96	95.155	ENSTGUG00000002623	PRPF4	100	97.546	Taeniopygia_guttata
ENSGALG00000008857	PRPF4	94	75.692	ENSTRUG00000008853	prpf4	99	75.692	Takifugu_rubripes
ENSGALG00000008857	PRPF4	94	76.040	ENSTNIG00000013250	prpf4	99	76.040	Tetraodon_nigroviridis
ENSGALG00000008857	PRPF4	96	81.871	ENSTBEG00000000821	PRPF4	98	82.192	Tupaia_belangeri
ENSGALG00000008857	PRPF4	79	93.023	ENSTTRG00000003246	PRPF4	85	93.023	Tursiops_truncatus
ENSGALG00000008857	PRPF4	57	88.274	ENSUAMG00000018288	PRPF4	88	88.274	Ursus_americanus
ENSGALG00000008857	PRPF4	95	89.628	ENSUMAG00000019375	PRPF4	98	89.628	Ursus_maritimus
ENSGALG00000008857	PRPF4	96	90.058	ENSVPAG00000005281	PRPF4	98	90.411	Vicugna_pacos
ENSGALG00000008857	PRPF4	96	88.462	ENSVVUG00000002476	PRPF4	99	90.297	Vulpes_vulpes
ENSGALG00000008857	PRPF4	67	57.735	ENSXCOG00000006101	prpf4	93	59.753	Xiphophorus_couchianus
ENSGALG00000008857	PRPF4	86	64.286	ENSXMAG00000002750	prpf4	99	65.089	Xiphophorus_maculatus