EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000009001 (Gene tree)
Gene ID: 424123
Gene Symbol: CWC22
Alias: -
Full Name: CWC22 spliceosome associated protein homolog
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 29509 bases
Position: chr7:14780212-14809720
Accession: 424123
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000014627	MA3	PF02847.17	2.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000014643	-	4774	-	ENSGALP00000014627	926 (aa)	XP_015144924	F1NI57

Gene Model

Click here to download ENSGALG00000009001's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000009001's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000009001	CWC22	100	69.542	ENSG00000163510	CWC22	89	80.896	Homo_sapiens
ENSGALG00000009001	CWC22	62	78.984	ENSAPOG00000004200	cwc22	86	67.829	Acanthochromis_polyacanthus
ENSGALG00000009001	CWC22	100	69.436	ENSAMEG00000011004	CWC22	100	68.750	Ailuropoda_melanoleuca
ENSGALG00000009001	CWC22	63	81.615	ENSACIG00000020055	cwc22	91	67.931	Amphilophus_citrinellus
ENSGALG00000009001	CWC22	62	81.913	ENSAPEG00000002673	cwc22	77	71.146	Amphiprion_percula
ENSGALG00000009001	CWC22	62	81.456	ENSATEG00000005176	cwc22	79	68.886	Anabas_testudineus
ENSGALG00000009001	CWC22	100	70.632	ENSACAG00000009438	CWC22	100	71.413	Anolis_carolinensis
ENSGALG00000009001	CWC22	100	70.256	ENSANAG00000028324	CWC22	100	69.723	Aotus_nancymaae
ENSGALG00000009001	CWC22	63	81.067	ENSACLG00000025447	cwc22	87	80.099	Astatotilapia_calliptera
ENSGALG00000009001	CWC22	100	70.011	ENSBTAG00000021726	CWC22	99	70.011	Bos_taurus
ENSGALG00000009001	CWC22	57	54.887	WBGene00002957	let-858	59	55.327	Caenorhabditis_elegans
ENSGALG00000009001	CWC22	100	70.181	ENSCAFG00000014160	CWC22	99	69.321	Canis_familiaris
ENSGALG00000009001	CWC22	100	67.949	ENSCAFG00020007223	CWC22	93	76.102	Canis_lupus_dingo
ENSGALG00000009001	CWC22	100	69.968	ENSCHIG00000017150	CWC22	99	70.181	Capra_hircus
ENSGALG00000009001	CWC22	90	64.810	ENSTSYG00000035591	-	95	63.699	Carlito_syrichta
ENSGALG00000009001	CWC22	100	70.181	ENSTSYG00000000218	-	100	69.947	Carlito_syrichta
ENSGALG00000009001	CWC22	95	62.883	ENSTSYG00000026635	-	95	63.531	Carlito_syrichta
ENSGALG00000009001	CWC22	95	63.688	ENSTSYG00000028686	-	98	62.642	Carlito_syrichta
ENSGALG00000009001	CWC22	90	68.496	ENSCAPG00000002064	CWC22	95	68.999	Cavia_aperea
ENSGALG00000009001	CWC22	99	69.040	ENSCPOG00000007492	CWC22	99	68.280	Cavia_porcellus
ENSGALG00000009001	CWC22	100	66.524	ENSCCAG00000021239	CWC22	100	66.309	Cebus_capucinus
ENSGALG00000009001	CWC22	100	69.862	ENSCATG00000035788	CWC22	100	69.542	Cercocebus_atys
ENSGALG00000009001	CWC22	99	68.167	ENSCLAG00000011118	CWC22	99	68.697	Chinchilla_lanigera
ENSGALG00000009001	CWC22	100	69.755	ENSCSAG00000012925	CWC22	100	68.856	Chlorocebus_sabaeus
ENSGALG00000009001	CWC22	90	71.813	ENSCHOG00000006362	CWC22	91	71.893	Choloepus_hoffmanni
ENSGALG00000009001	CWC22	99	79.039	ENSCPBG00000001765	CWC22	100	78.533	Chrysemys_picta_bellii
ENSGALG00000009001	CWC22	58	66.111	ENSCSAVG00000003537	-	78	74.634	Ciona_savignyi
ENSGALG00000009001	CWC22	100	69.755	ENSCANG00000013762	CWC22	100	69.329	Colobus_angolensis_palliatus
ENSGALG00000009001	CWC22	100	68.837	ENSCGRG00001017005	-	91	82.105	Cricetulus_griseus_chok1gshd
ENSGALG00000009001	CWC22	100	68.837	ENSCGRG00000001934	-	100	69.157	Cricetulus_griseus_crigri
ENSGALG00000009001	CWC22	59	75.273	ENSCSEG00000005257	cwc22	81	66.986	Cynoglossus_semilaevis
ENSGALG00000009001	CWC22	62	82.435	ENSCVAG00000009836	cwc22	76	69.075	Cyprinodon_variegatus
ENSGALG00000009001	CWC22	62	81.928	ENSDARG00000014008	cwc22	83	66.053	Danio_rerio
ENSGALG00000009001	CWC22	72	62.725	ENSDNOG00000032640	-	89	62.295	Dasypus_novemcinctus
ENSGALG00000009001	CWC22	100	69.141	ENSDNOG00000003020	-	100	69.565	Dasypus_novemcinctus
ENSGALG00000009001	CWC22	99	68.030	ENSDORG00000011483	-	99	68.642	Dipodomys_ordii
ENSGALG00000009001	CWC22	72	71.749	ENSETEG00000013355	CWC22	93	70.808	Echinops_telfairi
ENSGALG00000009001	CWC22	100	70.607	ENSEASG00005022287	CWC22	99	70.181	Equus_asinus_asinus
ENSGALG00000009001	CWC22	100	70.394	ENSECAG00000010769	CWC22	99	70.181	Equus_caballus
ENSGALG00000009001	CWC22	76	87.500	ENSEEUG00000005336	CWC22	77	88.172	Erinaceus_europaeus
ENSGALG00000009001	CWC22	89	67.141	ENSELUG00000010536	cwc22	91	77.931	Esox_lucius
ENSGALG00000009001	CWC22	100	70.362	ENSFCAG00000018982	CWC22	99	69.607	Felis_catus
ENSGALG00000009001	CWC22	97	87.721	ENSFALG00000003495	CWC22	99	85.684	Ficedula_albicollis
ENSGALG00000009001	CWC22	99	69.214	ENSFDAG00000010857	CWC22	99	68.958	Fukomys_damarensis
ENSGALG00000009001	CWC22	59	84.899	ENSFHEG00000009620	cwc22	75	71.850	Fundulus_heteroclitus
ENSGALG00000009001	CWC22	66	76.998	ENSGMOG00000009084	cwc22	91	80.668	Gadus_morhua
ENSGALG00000009001	CWC22	59	84.346	ENSGAFG00000021155	cwc22	86	71.923	Gambusia_affinis
ENSGALG00000009001	CWC22	100	79.117	ENSGAGG00000013471	CWC22	100	79.117	Gopherus_agassizii
ENSGALG00000009001	CWC22	100	69.862	ENSGGOG00000012484	CWC22	100	69.002	Gorilla_gorilla
ENSGALG00000009001	CWC22	60	80.570	ENSHBUG00000010504	cwc22	88	64.039	Haplochromis_burtoni
ENSGALG00000009001	CWC22	99	69.421	ENSHGLG00000005692	CWC22	99	68.517	Heterocephalus_glaber_female
ENSGALG00000009001	CWC22	99	69.421	ENSHGLG00100016497	CWC22	95	79.285	Heterocephalus_glaber_male
ENSGALG00000009001	CWC22	59	82.633	ENSHCOG00000004206	cwc22	80	73.792	Hippocampus_comes
ENSGALG00000009001	CWC22	100	68.943	ENSSTOG00000009788	CWC22	100	68.511	Ictidomys_tridecemlineatus
ENSGALG00000009001	CWC22	100	69.453	ENSJJAG00000017012	-	100	69.914	Jaculus_jaculus
ENSGALG00000009001	CWC22	63	80.475	ENSKMAG00000005228	cwc22	75	71.812	Kryptolebias_marmoratus
ENSGALG00000009001	CWC22	62	82.007	ENSLBEG00000020518	cwc22	87	63.729	Labrus_bergylta
ENSGALG00000009001	CWC22	88	66.146	ENSLACG00000005916	CWC22	68	68.107	Latimeria_chalumnae
ENSGALG00000009001	CWC22	100	63.389	ENSLOCG00000006456	cwc22	94	64.836	Lepisosteus_oculatus
ENSGALG00000009001	CWC22	100	68.034	ENSLAFG00000014802	CWC22	100	68.076	Loxodonta_africana
ENSGALG00000009001	CWC22	99	70.141	ENSMFAG00000000590	CWC22	99	71.068	Macaca_fascicularis
ENSGALG00000009001	CWC22	90	72.781	ENSMMUG00000020642	CWC22	100	67.838	Macaca_mulatta
ENSGALG00000009001	CWC22	100	69.542	ENSMNEG00000034567	CWC22	100	69.436	Macaca_nemestrina
ENSGALG00000009001	CWC22	100	69.862	ENSMLEG00000042344	CWC22	100	69.542	Mandrillus_leucophaeus
ENSGALG00000009001	CWC22	64	80.135	ENSMAMG00000018888	cwc22	74	71.916	Mastacembelus_armatus
ENSGALG00000009001	CWC22	63	81.067	ENSMZEG00005021449	cwc22	78	68.362	Maylandia_zebra
ENSGALG00000009001	CWC22	97	96.875	ENSMGAG00000009220	CWC22	100	96.875	Meleagris_gallopavo
ENSGALG00000009001	CWC22	79	68.407	ENSMAUG00000016154	-	95	70.476	Mesocricetus_auratus
ENSGALG00000009001	CWC22	99	70.206	ENSMICG00000016919	CWC22	99	69.438	Microcebus_murinus
ENSGALG00000009001	CWC22	64	75.377	ENSMMOG00000019720	cwc22	87	73.529	Mola_mola
ENSGALG00000009001	CWC22	59	80.874	ENSMODG00000003711	-	99	80.874	Monodelphis_domestica
ENSGALG00000009001	CWC22	60	80.581	ENSMODG00000020117	-	99	80.581	Monodelphis_domestica
ENSGALG00000009001	CWC22	100	69.616	ENSMODG00000010233	-	100	70.043	Monodelphis_domestica
ENSGALG00000009001	CWC22	100	67.663	MGP_CAROLIEiJ_G0023696	-	90	80.602	Mus_caroli
ENSGALG00000009001	CWC22	91	68.946	ENSMUSG00000079247	Gm13691	99	68.397	Mus_musculus
ENSGALG00000009001	CWC22	91	68.946	ENSMUSG00000096484	Gm13696	99	68.397	Mus_musculus
ENSGALG00000009001	CWC22	91	68.946	ENSMUSG00000094336	Gm13693	99	68.397	Mus_musculus
ENSGALG00000009001	CWC22	91	68.946	ENSMUSG00000095824	Gm13697	99	68.397	Mus_musculus
ENSGALG00000009001	CWC22	91	68.946	ENSMUSG00000096337	Gm13694	99	68.397	Mus_musculus
ENSGALG00000009001	CWC22	91	68.946	ENSMUSG00000096729	Gm13695	99	68.281	Mus_musculus
ENSGALG00000009001	CWC22	91	68.946	ENSMUSG00000094125	Gm13698	99	68.397	Mus_musculus
ENSGALG00000009001	CWC22	100	66.738	ENSMUSG00000027014	Cwc22	91	81.053	Mus_musculus
ENSGALG00000009001	CWC22	100	68.017	MGP_PahariEiJ_G0025147	-	89	81.203	Mus_pahari
ENSGALG00000009001	CWC22	100	69.477	ENSMPUG00000002432	CWC22	99	69.723	Mustela_putorius_furo
ENSGALG00000009001	CWC22	82	75.065	ENSMLUG00000024966	-	96	74.352	Myotis_lucifugus
ENSGALG00000009001	CWC22	89	72.749	ENSMLUG00000013437	-	100	72.338	Myotis_lucifugus
ENSGALG00000009001	CWC22	88	81.157	ENSNGAG00000013881	-	97	79.605	Nannospalax_galili
ENSGALG00000009001	CWC22	100	69.542	ENSNLEG00000006248	CWC22	100	68.644	Nomascus_leucogenys
ENSGALG00000009001	CWC22	60	80.824	ENSMEUG00000011026	CWC22	97	81.468	Notamacropus_eugenii
ENSGALG00000009001	CWC22	70	78.894	ENSOPRG00000007844	CWC22	73	79.229	Ochotona_princeps
ENSGALG00000009001	CWC22	55	88.672	ENSODEG00000007673	CWC22	82	89.041	Octodon_degus
ENSGALG00000009001	CWC22	57	84.335	ENSODEG00000005934	-	72	84.301	Octodon_degus
ENSGALG00000009001	CWC22	97	72.707	ENSOANG00000008649	CWC22	100	76.172	Ornithorhynchus_anatinus
ENSGALG00000009001	CWC22	64	80.808	ENSORLG00000010538	cwc22	60	83.808	Oryzias_latipes
ENSGALG00000009001	CWC22	64	80.808	ENSORLG00020015117	cwc22	60	83.808	Oryzias_latipes_hni
ENSGALG00000009001	CWC22	66	79.310	ENSORLG00015018073	cwc22	60	83.808	Oryzias_latipes_hsok
ENSGALG00000009001	CWC22	62	82.118	ENSOMEG00000015199	cwc22	76	70.692	Oryzias_melastigma
ENSGALG00000009001	CWC22	99	70.021	ENSOGAG00000015287	CWC22	99	69.700	Otolemur_garnettii
ENSGALG00000009001	CWC22	100	69.894	ENSOARG00000016905	CWC22	99	69.894	Ovis_aries
ENSGALG00000009001	CWC22	100	69.668	ENSPPAG00000027833	CWC22	100	68.803	Pan_paniscus
ENSGALG00000009001	CWC22	100	70.362	ENSPPRG00000001389	CWC22	99	69.607	Panthera_pardus
ENSGALG00000009001	CWC22	100	70.362	ENSPTIG00000019139	CWC22	99	69.501	Panthera_tigris_altaica
ENSGALG00000009001	CWC22	100	69.862	ENSPTRG00000012698	CWC22	100	69.002	Pan_troglodytes
ENSGALG00000009001	CWC22	100	69.862	ENSPANG00000018976	CWC22	100	69.542	Papio_anubis
ENSGALG00000009001	CWC22	95	62.111	ENSPKIG00000021346	cwc22	93	66.391	Paramormyrops_kingsleyae
ENSGALG00000009001	CWC22	100	78.471	ENSPSIG00000008632	CWC22	100	77.219	Pelodiscus_sinensis
ENSGALG00000009001	CWC22	62	75.742	ENSPMGG00000020129	cwc22	79	64.046	Periophthalmus_magnuspinnatus
ENSGALG00000009001	CWC22	99	63.018	ENSPEMG00000023936	-	89	76.524	Peromyscus_maniculatus_bairdii
ENSGALG00000009001	CWC22	90	61.198	ENSPMAG00000005914	cwc22	92	60.694	Petromyzon_marinus
ENSGALG00000009001	CWC22	99	70.054	ENSPCIG00000009903	-	91	80.621	Phascolarctos_cinereus
ENSGALG00000009001	CWC22	60	83.906	ENSPFOG00000015025	cwc22	74	83.692	Poecilia_formosa
ENSGALG00000009001	CWC22	59	84.335	ENSPLAG00000021405	cwc22	79	67.801	Poecilia_latipinna
ENSGALG00000009001	CWC22	60	83.906	ENSPMEG00000007850	cwc22	75	70.665	Poecilia_mexicana
ENSGALG00000009001	CWC22	60	80.144	ENSPREG00000004312	cwc22	89	68.620	Poecilia_reticulata
ENSGALG00000009001	CWC22	100	69.862	ENSPPYG00000012986	CWC22	100	69.542	Pongo_abelii
ENSGALG00000009001	CWC22	99	66.486	ENSPCAG00000011882	CWC22	100	66.595	Procavia_capensis
ENSGALG00000009001	CWC22	93	69.094	ENSPCOG00000010195	CWC22	100	57.097	Propithecus_coquereli
ENSGALG00000009001	CWC22	100	69.050	ENSPVAG00000011497	CWC22	99	68.000	Pteropus_vampyrus
ENSGALG00000009001	CWC22	63	79.002	ENSPNYG00000010435	cwc22	87	77.303	Pundamilia_nyererei
ENSGALG00000009001	CWC22	99	66.089	ENSRNOG00000012651	Cwc22	100	65.339	Rattus_norvegicus
ENSGALG00000009001	CWC22	99	65.764	ENSRNOG00000038322	LOC500684	99	64.617	Rattus_norvegicus
ENSGALG00000009001	CWC22	99	67.749	ENSRBIG00000036751	CWC22	99	67.603	Rhinopithecus_bieti
ENSGALG00000009001	CWC22	100	69.936	ENSRROG00000037520	CWC22	100	69.616	Rhinopithecus_roxellana
ENSGALG00000009001	CWC22	99	67.484	ENSSBOG00000021683	CWC22	100	67.377	Saimiri_boliviensis_boliviensis
ENSGALG00000009001	CWC22	96	71.032	ENSSHAG00000016596	-	99	69.967	Sarcophilus_harrisii
ENSGALG00000009001	CWC22	72	68.318	ENSSHAG00000004040	-	90	68.358	Sarcophilus_harrisii
ENSGALG00000009001	CWC22	63	78.498	ENSSMAG00000004724	cwc22	61	76.316	Scophthalmus_maximus
ENSGALG00000009001	CWC22	62	81.739	ENSSDUG00000010656	cwc22	76	67.123	Seriola_dumerili
ENSGALG00000009001	CWC22	59	83.942	ENSSLDG00000023157	cwc22	85	79.564	Seriola_lalandi_dorsalis
ENSGALG00000009001	CWC22	61	85.520	ENSSARG00000013596	-	64	84.513	Sorex_araneus
ENSGALG00000009001	CWC22	96	74.025	ENSSPUG00000006395	CWC22	98	73.893	Sphenodon_punctatus
ENSGALG00000009001	CWC22	63	81.897	ENSSPAG00000008746	cwc22	75	70.942	Stegastes_partitus
ENSGALG00000009001	CWC22	100	69.565	ENSSSCG00000016008	CWC22	99	70.213	Sus_scrofa
ENSGALG00000009001	CWC22	97	86.845	ENSTGUG00000009340	-	100	86.845	Taeniopygia_guttata
ENSGALG00000009001	CWC22	64	78.073	ENSTRUG00000014411	cwc22	69	76.372	Takifugu_rubripes
ENSGALG00000009001	CWC22	59	80.576	ENSTNIG00000005074	cwc22	73	81.115	Tetraodon_nigroviridis
ENSGALG00000009001	CWC22	95	57.830	ENSTBEG00000014539	CWC22	94	58.305	Tupaia_belangeri
ENSGALG00000009001	CWC22	100	69.149	ENSTTRG00000012142	CWC22	99	67.838	Tursiops_truncatus
ENSGALG00000009001	CWC22	94	77.723	ENSUAMG00000010342	CWC22	99	76.733	Ursus_americanus
ENSGALG00000009001	CWC22	100	69.968	ENSUMAG00000016730	CWC22	99	69.280	Ursus_maritimus
ENSGALG00000009001	CWC22	72	82.635	ENSVPAG00000008565	CWC22	73	81.493	Vicugna_pacos
ENSGALG00000009001	CWC22	100	69.968	ENSVVUG00000009738	CWC22	99	69.649	Vulpes_vulpes
ENSGALG00000009001	CWC22	83	73.121	ENSXETG00000014099	cwc22	86	78.900	Xenopus_tropicalis
ENSGALG00000009001	CWC22	59	83.971	ENSXMAG00000013201	cwc22	74	70.196	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000398	mRNA splicing, via spliceosome	-	ISS	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003723	RNA binding	-	ISS	Function
GO:0005634	nucleus	-	ISS	Component
GO:0005681	spliceosomal complex	-	ISS	Component
GO:0016607	nuclear speck	-	IEA	Component
GO:0071005	U2-type precatalytic spliceosome	-	ISS	Component
GO:0071006	U2-type catalytic step 1 spliceosome	21873635.	IBA	Component
GO:0071006	U2-type catalytic step 1 spliceosome	-	ISS	Component
GO:0071007	U2-type catalytic step 2 spliceosome	-	ISS	Component
GO:0071013	catalytic step 2 spliceosome	21873635.	IBA	Component