EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000009228 (Gene tree)
Gene ID: 396199
Gene Symbol: PARP1
Alias: ADPRT|ARTD1|PARP-1
Full Name: poly (ADP-ribose) polymerase 1
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 29240 bases
Position: chr3:17119785-17149024
Accession: 396199
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000038037	PARP	PF00644.20	4e-75	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
					(aa)

Gene Model

Click here to download ENSGALG00000009228's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03410	Base excision repair	KEGG
gga04210	Apoptosis	KEGG
gga04217	Necroptosis	KEGG

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000009228	PARP1	100	79.371	ENSG00000143799	PARP1	100	78.466	Homo_sapiens
ENSGALG00000009228	PARP1	100	73.994	ENSAPOG00000006414	parp1	100	73.700	Acanthochromis_polyacanthus
ENSGALG00000009228	PARP1	99	77.033	ENSAMEG00000014451	PARP1	100	76.626	Ailuropoda_melanoleuca
ENSGALG00000009228	PARP1	99	74.308	ENSACIG00000005651	parp1	99	73.762	Amphilophus_citrinellus
ENSGALG00000009228	PARP1	99	74.630	ENSAOCG00000021005	parp1	99	74.432	Amphiprion_ocellaris
ENSGALG00000009228	PARP1	99	74.630	ENSAPEG00000004784	parp1	99	74.432	Amphiprion_percula
ENSGALG00000009228	PARP1	99	74.235	ENSATEG00000010457	parp1	99	74.038	Anabas_testudineus
ENSGALG00000009228	PARP1	87	96.123	ENSAPLG00000014039	PARP1	100	96.123	Anas_platyrhynchos
ENSGALG00000009228	PARP1	100	82.806	ENSACAG00000006189	PARP1	100	82.905	Anolis_carolinensis
ENSGALG00000009228	PARP1	100	79.449	ENSANAG00000032699	PARP1	100	79.232	Aotus_nancymaae
ENSGALG00000009228	PARP1	99	75.050	ENSACLG00000015489	parp1	99	74.553	Astatotilapia_calliptera
ENSGALG00000009228	PARP1	99	72.495	ENSAMXG00000006465	parp1	99	73.084	Astyanax_mexicanus
ENSGALG00000009228	PARP1	100	77.581	ENSBTAG00000000837	PARP1	100	77.483	Bos_taurus
ENSGALG00000009228	PARP1	83	44.246	WBGene00004049	parp-1	100	45.627	Caenorhabditis_elegans
ENSGALG00000009228	PARP1	100	79.449	ENSCJAG00000012831	PARP1	100	79.232	Callithrix_jacchus
ENSGALG00000009228	PARP1	99	77.641	ENSCAFG00000016089	PARP1	100	77.641	Canis_familiaris
ENSGALG00000009228	PARP1	100	78.128	ENSCAFG00020001660	PARP1	100	78.128	Canis_lupus_dingo
ENSGALG00000009228	PARP1	100	77.953	ENSCHIG00000018072	PARP1	100	77.876	Capra_hircus
ENSGALG00000009228	PARP1	99	80.828	ENSTSYG00000003699	PARP1	99	80.811	Carlito_syrichta
ENSGALG00000009228	PARP1	99	65.781	ENSCAPG00000011113	-	99	65.677	Cavia_aperea
ENSGALG00000009228	PARP1	100	78.642	ENSCPOG00000015643	-	100	78.227	Cavia_porcellus
ENSGALG00000009228	PARP1	100	79.744	ENSCCAG00000033484	PARP1	100	79.331	Cebus_capucinus
ENSGALG00000009228	PARP1	100	79.175	ENSCATG00000038981	PARP1	100	78.564	Cercocebus_atys
ENSGALG00000009228	PARP1	100	78.094	ENSCLAG00000006637	PARP1	100	77.134	Chinchilla_lanigera
ENSGALG00000009228	PARP1	65	90.625	ENSCHOG00000003539	PARP1	66	90.625	Choloepus_hoffmanni
ENSGALG00000009228	PARP1	100	89.614	ENSCPBG00000011958	PARP1	100	89.614	Chrysemys_picta_bellii
ENSGALG00000009228	PARP1	99	78.834	ENSCANG00000041340	PARP1	100	78.199	Colobus_angolensis_palliatus
ENSGALG00000009228	PARP1	100	77.778	ENSCGRG00001020559	Parp1	100	77.286	Cricetulus_griseus_chok1gshd
ENSGALG00000009228	PARP1	99	77.892	ENSCGRG00000004864	Parp1	100	77.380	Cricetulus_griseus_crigri
ENSGALG00000009228	PARP1	100	73.359	ENSCSEG00000020665	parp1	99	81.984	Cynoglossus_semilaevis
ENSGALG00000009228	PARP1	99	72.912	ENSCVAG00000021372	parp1	99	73.116	Cyprinodon_variegatus
ENSGALG00000009228	PARP1	100	73.107	ENSDARG00000019529	parp1	99	73.767	Danio_rerio
ENSGALG00000009228	PARP1	99	77.515	ENSDNOG00000012059	PARP1	100	77.310	Dasypus_novemcinctus
ENSGALG00000009228	PARP1	99	77.641	ENSDORG00000005234	Parp1	100	77.231	Dipodomys_ordii
ENSGALG00000009228	PARP1	99	42.235	FBgn0010247	Parp	99	41.240	Drosophila_melanogaster
ENSGALG00000009228	PARP1	87	90.625	ENSETEG00000013254	PARP1	88	90.625	Echinops_telfairi
ENSGALG00000009228	PARP1	99	60.585	ENSEBUG00000005820	parp1	100	60.282	Eptatretus_burgeri
ENSGALG00000009228	PARP1	98	78.078	ENSEASG00005013275	PARP1	99	78.100	Equus_asinus_asinus
ENSGALG00000009228	PARP1	100	78.269	ENSECAG00000019207	PARP1	100	78.564	Equus_caballus
ENSGALG00000009228	PARP1	100	75.246	ENSEEUG00000012253	PARP1	100	75.246	Erinaceus_europaeus
ENSGALG00000009228	PARP1	99	73.973	ENSELUG00000017336	parp1	99	73.062	Esox_lucius
ENSGALG00000009228	PARP1	99	77.902	ENSFCAG00000005777	PARP1	100	77.393	Felis_catus
ENSGALG00000009228	PARP1	99	95.057	ENSFALG00000011578	PARP1	100	95.057	Ficedula_albicollis
ENSGALG00000009228	PARP1	99	77.301	ENSFDAG00000017662	PARP1	100	76.459	Fukomys_damarensis
ENSGALG00000009228	PARP1	99	73.741	ENSFHEG00000001117	parp1	99	73.741	Fundulus_heteroclitus
ENSGALG00000009228	PARP1	99	73.596	ENSGMOG00000014929	parp1	99	73.084	Gadus_morhua
ENSGALG00000009228	PARP1	100	73.111	ENSGAFG00000010450	parp1	100	72.718	Gambusia_affinis
ENSGALG00000009228	PARP1	99	73.202	ENSGACG00000011280	parp1	99	73.103	Gasterosteus_aculeatus
ENSGALG00000009228	PARP1	100	89.219	ENSGAGG00000010066	PARP1	100	88.823	Gopherus_agassizii
ENSGALG00000009228	PARP1	100	79.077	ENSGGOG00000006308	PARP1	100	78.171	Gorilla_gorilla
ENSGALG00000009228	PARP1	99	75.321	ENSHBUG00000010490	parp1	99	74.729	Haplochromis_burtoni
ENSGALG00000009228	PARP1	99	77.301	ENSHGLG00000003992	PARP1	93	76.434	Heterocephalus_glaber_female
ENSGALG00000009228	PARP1	99	77.301	ENSHGLG00100016965	PARP1	93	76.434	Heterocephalus_glaber_male
ENSGALG00000009228	PARP1	99	72.718	ENSHCOG00000011619	parp1	99	72.075	Hippocampus_comes
ENSGALG00000009228	PARP1	99	73.288	ENSIPUG00000020250	parp1	99	73.190	Ictalurus_punctatus
ENSGALG00000009228	PARP1	100	79.470	ENSSTOG00000016000	PARP1	100	78.564	Ictidomys_tridecemlineatus
ENSGALG00000009228	PARP1	100	77.603	ENSJJAG00000023497	Parp1	100	77.308	Jaculus_jaculus
ENSGALG00000009228	PARP1	99	74.334	ENSKMAG00000011627	parp1	99	74.334	Kryptolebias_marmoratus
ENSGALG00000009228	PARP1	99	74.704	ENSLBEG00000013376	parp1	99	73.913	Labrus_bergylta
ENSGALG00000009228	PARP1	99	62.072	ENSLACG00000002735	PARP1	99	62.562	Latimeria_chalumnae
ENSGALG00000009228	PARP1	99	76.143	ENSLOCG00000015798	parp1	99	76.143	Lepisosteus_oculatus
ENSGALG00000009228	PARP1	99	76.459	ENSLAFG00000007830	PARP1	100	76.766	Loxodonta_africana
ENSGALG00000009228	PARP1	100	79.175	ENSMFAG00000002526	PARP1	100	78.564	Macaca_fascicularis
ENSGALG00000009228	PARP1	100	79.273	ENSMMUG00000021820	PARP1	100	78.663	Macaca_mulatta
ENSGALG00000009228	PARP1	100	79.175	ENSMNEG00000034074	PARP1	100	78.564	Macaca_nemestrina
ENSGALG00000009228	PARP1	100	77.277	ENSMLEG00000012344	PARP1	100	76.667	Mandrillus_leucophaeus
ENSGALG00000009228	PARP1	99	74.926	ENSMAMG00000020652	parp1	99	74.727	Mastacembelus_armatus
ENSGALG00000009228	PARP1	99	75.518	ENSMZEG00005016907	parp1	99	74.926	Maylandia_zebra
ENSGALG00000009228	PARP1	99	98.558	ENSMGAG00000007760	PARP1	100	98.558	Meleagris_gallopavo
ENSGALG00000009228	PARP1	100	78.094	ENSMAUG00000008306	Parp1	100	77.581	Mesocricetus_auratus
ENSGALG00000009228	PARP1	100	76.008	ENSMICG00000017076	PARP1	100	75.320	Microcebus_murinus
ENSGALG00000009228	PARP1	100	77.581	ENSMOCG00000014315	Parp1	100	76.991	Microtus_ochrogaster
ENSGALG00000009228	PARP1	99	73.471	ENSMMOG00000015966	parp1	99	73.294	Mola_mola
ENSGALG00000009228	PARP1	100	81.854	ENSMODG00000006076	PARP1	100	81.755	Monodelphis_domestica
ENSGALG00000009228	PARP1	99	72.557	ENSMALG00000004057	parp1	99	72.359	Monopterus_albus
ENSGALG00000009228	PARP1	100	78.094	MGP_CAROLIEiJ_G0014978	Parp1	100	86.735	Mus_caroli
ENSGALG00000009228	PARP1	100	77.691	ENSMUSG00000026496	Parp1	99	86.735	Mus_musculus
ENSGALG00000009228	PARP1	100	77.691	MGP_SPRETEiJ_G0015777	Parp1	100	86.735	Mus_spretus
ENSGALG00000009228	PARP1	100	78.445	ENSMPUG00000004585	PARP1	100	78.445	Mustela_putorius_furo
ENSGALG00000009228	PARP1	90	65.060	ENSMLUG00000012285	PARP1	100	65.389	Myotis_lucifugus
ENSGALG00000009228	PARP1	100	78.761	ENSNGAG00000003885	Parp1	100	78.193	Nannospalax_galili
ENSGALG00000009228	PARP1	99	74.950	ENSNBRG00000017434	parp1	99	74.453	Neolamprologus_brichardi
ENSGALG00000009228	PARP1	95	85.450	ENSNLEG00000013905	PARP1	100	85.450	Nomascus_leucogenys
ENSGALG00000009228	PARP1	67	87.761	ENSMEUG00000007720	PARP1	87	87.761	Notamacropus_eugenii
ENSGALG00000009228	PARP1	100	79.273	ENSOPRG00000011722	PARP1	100	78.859	Ochotona_princeps
ENSGALG00000009228	PARP1	100	75.689	ENSODEG00000007424	PARP1	100	75.886	Octodon_degus
ENSGALG00000009228	PARP1	99	75.518	ENSONIG00000013486	parp1	99	75.222	Oreochromis_niloticus
ENSGALG00000009228	PARP1	99	85.817	ENSOANG00000001488	PARP1	100	85.817	Ornithorhynchus_anatinus
ENSGALG00000009228	PARP1	100	79.646	ENSOCUG00000017820	PARP1	100	79.253	Oryctolagus_cuniculus
ENSGALG00000009228	PARP1	100	73.209	ENSORLG00000013691	parp1	100	73.209	Oryzias_latipes
ENSGALG00000009228	PARP1	99	72.948	ENSORLG00020001074	parp1	99	72.948	Oryzias_latipes_hni
ENSGALG00000009228	PARP1	100	73.013	ENSORLG00015007090	parp1	100	73.013	Oryzias_latipes_hsok
ENSGALG00000009228	PARP1	100	79.175	ENSOGAG00000016206	PARP1	100	78.684	Otolemur_garnettii
ENSGALG00000009228	PARP1	100	77.876	ENSOARG00000000811	PARP1	100	77.974	Ovis_aries
ENSGALG00000009228	PARP1	100	78.978	ENSPPAG00000040862	PARP1	100	78.073	Pan_paniscus
ENSGALG00000009228	PARP1	99	77.766	ENSPPRG00000003528	PARP1	100	77.459	Panthera_pardus
ENSGALG00000009228	PARP1	97	66.632	ENSPTIG00000009102	PARP1	98	65.792	Panthera_tigris_altaica
ENSGALG00000009228	PARP1	100	78.978	ENSPTRG00000002049	PARP1	100	78.073	Pan_troglodytes
ENSGALG00000009228	PARP1	100	79.293	ENSPANG00000011198	PARP1	100	78.684	Papio_anubis
ENSGALG00000009228	PARP1	99	73.518	ENSPKIG00000006039	parp1	100	73.333	Paramormyrops_kingsleyae
ENSGALG00000009228	PARP1	99	88.718	ENSPSIG00000016374	PARP1	100	88.718	Pelodiscus_sinensis
ENSGALG00000009228	PARP1	99	70.490	ENSPMGG00000008936	parp1	99	70.542	Periophthalmus_magnuspinnatus
ENSGALG00000009228	PARP1	100	77.963	ENSPEMG00000020230	Parp1	100	77.286	Peromyscus_maniculatus_bairdii
ENSGALG00000009228	PARP1	100	81.164	ENSPCIG00000006436	PARP1	100	80.966	Phascolarctos_cinereus
ENSGALG00000009228	PARP1	99	72.853	ENSPFOG00000002342	parp1	99	72.162	Poecilia_formosa
ENSGALG00000009228	PARP1	99	73.445	ENSPLAG00000000909	parp1	99	73.149	Poecilia_latipinna
ENSGALG00000009228	PARP1	99	73.544	ENSPMEG00000013979	parp1	99	73.149	Poecilia_mexicana
ENSGALG00000009228	PARP1	99	73.050	ENSPREG00000001114	parp1	99	72.655	Poecilia_reticulata
ENSGALG00000009228	PARP1	99	79.303	ENSPPYG00000000164	PARP1	100	78.359	Pongo_abelii
ENSGALG00000009228	PARP1	56	87.346	ENSPCAG00000005558	-	56	87.346	Procavia_capensis
ENSGALG00000009228	PARP1	100	78.978	ENSPCOG00000016918	PARP1	100	78.761	Propithecus_coquereli
ENSGALG00000009228	PARP1	92	88.208	ENSPVAG00000005543	PARP1	85	88.208	Pteropus_vampyrus
ENSGALG00000009228	PARP1	99	75.050	ENSPNYG00000009702	parp1	99	74.553	Pundamilia_nyererei
ENSGALG00000009228	PARP1	99	74.336	ENSPNAG00000002787	parp1	99	74.216	Pygocentrus_nattereri
ENSGALG00000009228	PARP1	100	77.112	ENSRNOG00000003084	Parp1	100	76.916	Rattus_norvegicus
ENSGALG00000009228	PARP1	100	78.880	ENSRBIG00000044893	PARP1	100	79.147	Rhinopithecus_bieti
ENSGALG00000009228	PARP1	100	57.859	ENSRROG00000040615	-	100	63.504	Rhinopithecus_roxellana
ENSGALG00000009228	PARP1	100	78.880	ENSRROG00000029280	PARP1	100	79.147	Rhinopithecus_roxellana
ENSGALG00000009228	PARP1	100	79.646	ENSSBOG00000010144	PARP1	100	79.528	Saimiri_boliviensis_boliviensis
ENSGALG00000009228	PARP1	99	81.070	ENSSHAG00000001991	PARP1	100	80.967	Sarcophilus_harrisii
ENSGALG00000009228	PARP1	99	73.913	ENSSFOG00015020017	parp1	99	73.814	Scleropages_formosus
ENSGALG00000009228	PARP1	99	74.334	ENSSMAG00000013799	parp1	99	73.741	Scophthalmus_maximus
ENSGALG00000009228	PARP1	99	74.630	ENSSDUG00000016626	parp1	99	74.089	Seriola_dumerili
ENSGALG00000009228	PARP1	99	74.630	ENSSLDG00000006384	parp1	99	74.089	Seriola_lalandi_dorsalis
ENSGALG00000009228	PARP1	53	86.574	ENSSARG00000009436	-	58	86.667	Sorex_araneus
ENSGALG00000009228	PARP1	100	83.202	ENSSPUG00000007790	PARP1	100	83.103	Sphenodon_punctatus
ENSGALG00000009228	PARP1	99	72.890	ENSSPAG00000019074	parp1	99	73.922	Stegastes_partitus
ENSGALG00000009228	PARP1	100	78.094	ENSSSCG00000023660	PARP1	100	77.679	Sus_scrofa
ENSGALG00000009228	PARP1	98	93.645	ENSTGUG00000004260	-	100	93.645	Taeniopygia_guttata
ENSGALG00000009228	PARP1	100	73.438	ENSTRUG00000014490	parp1	100	73.281	Takifugu_rubripes
ENSGALG00000009228	PARP1	100	72.736	ENSTNIG00000016384	parp1	100	71.973	Tetraodon_nigroviridis
ENSGALG00000009228	PARP1	82	87.698	ENSTBEG00000002364	PARP1	92	82.727	Tupaia_belangeri
ENSGALG00000009228	PARP1	100	74.140	ENSTTRG00000000188	PARP1	100	73.720	Tursiops_truncatus
ENSGALG00000009228	PARP1	99	77.607	ENSUAMG00000014388	PARP1	100	77.198	Ursus_americanus
ENSGALG00000009228	PARP1	96	70.102	ENSUMAG00000014555	PARP1	99	70.276	Ursus_maritimus
ENSGALG00000009228	PARP1	84	89.474	ENSVPAG00000011411	PARP1	84	89.474	Vicugna_pacos
ENSGALG00000009228	PARP1	99	77.641	ENSVVUG00000001655	PARP1	100	77.641	Vulpes_vulpes
ENSGALG00000009228	PARP1	98	77.666	ENSXETG00000022610	parp1	99	76.861	Xenopus_tropicalis
ENSGALG00000009228	PARP1	99	72.853	ENSXMAG00000003632	parp1	99	72.458	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	IEA	Function
GO:0003950	NAD+ ADP-ribosyltransferase activity	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005694	chromosome	-	IEA	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0006302	double-strand break repair	21873635.	IBA	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0018312	peptidyl-serine ADP-ribosylation	-	ISS	Process
GO:0018424	peptidyl-glutamic acid poly-ADP-ribosylation	-	ISS	Process
GO:0030592	DNA ADP-ribosylation	-	ISS	Process
GO:0051287	NAD binding	-	IEA	Function
GO:0070212	protein poly-ADP-ribosylation	21873635.	IBA	Process
GO:0070212	protein poly-ADP-ribosylation	15674325.	IDA	Process
GO:0070213	protein auto-ADP-ribosylation	-	ISS	Process
GO:1905168	positive regulation of double-strand break repair via homologous recombination	-	ISS	Process
GO:1990404	protein ADP-ribosylase activity	21873635.	IBA	Function
GO:1990404	protein ADP-ribosylase activity	-	ISS	Function
GO:1990966	ATP generation from poly-ADP-D-ribose	-	ISS	Process