EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000010783 (Gene tree)
Gene ID: 423416
Gene Symbol: CPSF2
Alias: -
Full Name: Gallus gallus cleavage and polyadenylation specific factor 2 (CPSF2)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 13511 bases
Position: chr5:44776755-44790265
Accession: NM_001031208
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000017517	Beta-Casp	PF10996.8	2.5e-20	1	1
ENSGALP00000017517	Lactamase_B	PF00753.27	4.6e-06	1	1
ENSGALP00000017517	RMMBL	PF07521.12	7.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000017538	-	3745	-	ENSGALP00000017517	782 (aa)	XP_015142938	F1NMN0

Gene Model

Click here to download ENSGALG00000010783's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000010783's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000010783	CPSF2	100	96.041	ENSG00000165934	CPSF2	100	95.530	Homo_sapiens
ENSGALG00000010783	CPSF2	100	85.787	ENSAPOG00000001242	cpsf2	100	85.787	Acanthochromis_polyacanthus
ENSGALG00000010783	CPSF2	100	86.439	ENSACIG00000009331	cpsf2	100	86.439	Amphilophus_citrinellus
ENSGALG00000010783	CPSF2	100	86.041	ENSAOCG00000014095	cpsf2	100	86.041	Amphiprion_ocellaris
ENSGALG00000010783	CPSF2	100	86.041	ENSAPEG00000009158	cpsf2	100	86.041	Amphiprion_percula
ENSGALG00000010783	CPSF2	96	86.298	ENSATEG00000017644	cpsf2	100	84.615	Anabas_testudineus
ENSGALG00000010783	CPSF2	100	98.852	ENSAPLG00000006330	CPSF2	100	98.852	Anas_platyrhynchos
ENSGALG00000010783	CPSF2	100	95.658	ENSACAG00000009245	CPSF2	100	95.019	Anolis_carolinensis
ENSGALG00000010783	CPSF2	100	96.041	ENSANAG00000022915	CPSF2	100	95.530	Aotus_nancymaae
ENSGALG00000010783	CPSF2	100	86.150	ENSAMXG00000018696	cpsf2	100	86.023	Astyanax_mexicanus
ENSGALG00000010783	CPSF2	100	96.424	ENSBTAG00000010227	CPSF2	100	95.913	Bos_taurus
ENSGALG00000010783	CPSF2	100	41.197	WBGene00017313	cpsf-2	100	40.898	Caenorhabditis_elegans
ENSGALG00000010783	CPSF2	100	96.041	ENSCJAG00000018069	CPSF2	100	95.530	Callithrix_jacchus
ENSGALG00000010783	CPSF2	100	96.041	ENSCAFG00000010909	CPSF2	100	95.530	Canis_familiaris
ENSGALG00000010783	CPSF2	100	96.041	ENSCAFG00020020670	CPSF2	100	95.530	Canis_lupus_dingo
ENSGALG00000010783	CPSF2	100	96.424	ENSCHIG00000023848	CPSF2	100	95.913	Capra_hircus
ENSGALG00000010783	CPSF2	100	95.530	ENSTSYG00000009036	CPSF2	100	95.019	Carlito_syrichta
ENSGALG00000010783	CPSF2	100	96.169	ENSCPOG00000010899	CPSF2	100	95.658	Cavia_porcellus
ENSGALG00000010783	CPSF2	100	96.041	ENSCCAG00000028088	CPSF2	100	95.530	Cebus_capucinus
ENSGALG00000010783	CPSF2	100	96.169	ENSCATG00000030132	CPSF2	100	95.658	Cercocebus_atys
ENSGALG00000010783	CPSF2	100	96.041	ENSCLAG00000012404	CPSF2	100	95.530	Chinchilla_lanigera
ENSGALG00000010783	CPSF2	100	96.169	ENSCSAG00000011300	CPSF2	100	95.658	Chlorocebus_sabaeus
ENSGALG00000010783	CPSF2	100	89.783	ENSCHOG00000012904	CPSF2	100	89.783	Choloepus_hoffmanni
ENSGALG00000010783	CPSF2	100	97.573	ENSCPBG00000008766	CPSF2	97	97.573	Chrysemys_picta_bellii
ENSGALG00000010783	CPSF2	100	54.750	ENSCING00000007881	-	100	54.375	Ciona_intestinalis
ENSGALG00000010783	CPSF2	94	96.180	ENSCANG00000041651	CPSF2	100	95.634	Colobus_angolensis_palliatus
ENSGALG00000010783	CPSF2	100	95.913	ENSCGRG00001006901	Cpsf2	100	95.402	Cricetulus_griseus_chok1gshd
ENSGALG00000010783	CPSF2	100	95.913	ENSCGRG00000012416	Cpsf2	100	95.402	Cricetulus_griseus_crigri
ENSGALG00000010783	CPSF2	100	84.157	ENSCSEG00000004116	cpsf2	100	83.904	Cynoglossus_semilaevis
ENSGALG00000010783	CPSF2	100	84.956	ENSCVAG00000000095	cpsf2	100	85.533	Cyprinodon_variegatus
ENSGALG00000010783	CPSF2	100	85.570	ENSDARG00000028971	cpsf2	100	85.443	Danio_rerio
ENSGALG00000010783	CPSF2	100	96.169	ENSDNOG00000042757	CPSF2	100	95.658	Dasypus_novemcinctus
ENSGALG00000010783	CPSF2	100	95.785	ENSDORG00000013709	Cpsf2	100	95.275	Dipodomys_ordii
ENSGALG00000010783	CPSF2	100	53.367	FBgn0027873	Cpsf100	100	53.000	Drosophila_melanogaster
ENSGALG00000010783	CPSF2	100	87.117	ENSETEG00000012123	CPSF2	100	86.990	Echinops_telfairi
ENSGALG00000010783	CPSF2	52	76.225	ENSEBUG00000012098	cpsf2	93	76.225	Eptatretus_burgeri
ENSGALG00000010783	CPSF2	91	96.246	ENSEASG00005021193	CPSF2	100	96.246	Equus_asinus_asinus
ENSGALG00000010783	CPSF2	100	95.913	ENSECAG00000023935	CPSF2	100	95.402	Equus_caballus
ENSGALG00000010783	CPSF2	100	84.818	ENSELUG00000008442	cpsf2	100	84.065	Esox_lucius
ENSGALG00000010783	CPSF2	100	95.913	ENSFCAG00000007886	CPSF2	100	95.402	Felis_catus
ENSGALG00000010783	CPSF2	100	98.593	ENSFALG00000002412	CPSF2	100	98.593	Ficedula_albicollis
ENSGALG00000010783	CPSF2	100	96.041	ENSFDAG00000006327	CPSF2	100	95.530	Fukomys_damarensis
ENSGALG00000010783	CPSF2	96	84.766	ENSFHEG00000015465	cpsf2	98	85.229	Fundulus_heteroclitus
ENSGALG00000010783	CPSF2	100	83.965	ENSGMOG00000008761	cpsf2	100	83.439	Gadus_morhua
ENSGALG00000010783	CPSF2	100	85.533	ENSGAFG00000001407	cpsf2	100	85.533	Gambusia_affinis
ENSGALG00000010783	CPSF2	100	85.152	ENSGACG00000008418	cpsf2	100	85.152	Gasterosteus_aculeatus
ENSGALG00000010783	CPSF2	100	97.446	ENSGAGG00000008287	CPSF2	100	97.446	Gopherus_agassizii
ENSGALG00000010783	CPSF2	100	96.041	ENSGGOG00000011799	CPSF2	100	95.530	Gorilla_gorilla
ENSGALG00000010783	CPSF2	100	86.041	ENSHBUG00000023466	cpsf2	100	86.041	Haplochromis_burtoni
ENSGALG00000010783	CPSF2	100	95.913	ENSHGLG00000018311	CPSF2	100	95.402	Heterocephalus_glaber_female
ENSGALG00000010783	CPSF2	100	95.913	ENSHGLG00100016460	CPSF2	100	95.402	Heterocephalus_glaber_male
ENSGALG00000010783	CPSF2	100	85.152	ENSHCOG00000019527	cpsf2	98	85.152	Hippocampus_comes
ENSGALG00000010783	CPSF2	100	86.277	ENSIPUG00000020857	cpsf2	100	85.769	Ictalurus_punctatus
ENSGALG00000010783	CPSF2	100	96.041	ENSSTOG00000009528	CPSF2	100	95.530	Ictidomys_tridecemlineatus
ENSGALG00000010783	CPSF2	100	96.169	ENSJJAG00000017925	Cpsf2	100	95.658	Jaculus_jaculus
ENSGALG00000010783	CPSF2	100	84.645	ENSKMAG00000019429	cpsf2	100	84.645	Kryptolebias_marmoratus
ENSGALG00000010783	CPSF2	95	84.739	ENSLBEG00000011585	cpsf2	100	84.739	Labrus_bergylta
ENSGALG00000010783	CPSF2	100	91.432	ENSLACG00000019024	CPSF2	100	91.432	Latimeria_chalumnae
ENSGALG00000010783	CPSF2	100	88.340	ENSLOCG00000014102	cpsf2	100	88.213	Lepisosteus_oculatus
ENSGALG00000010783	CPSF2	100	95.796	ENSLAFG00000004891	CPSF2	100	95.796	Loxodonta_africana
ENSGALG00000010783	CPSF2	100	96.169	ENSMFAG00000041212	CPSF2	100	95.658	Macaca_fascicularis
ENSGALG00000010783	CPSF2	100	96.169	ENSMMUG00000000699	CPSF2	100	95.658	Macaca_mulatta
ENSGALG00000010783	CPSF2	100	96.169	ENSMNEG00000031584	CPSF2	100	95.658	Macaca_nemestrina
ENSGALG00000010783	CPSF2	100	96.169	ENSMLEG00000029394	CPSF2	100	95.658	Mandrillus_leucophaeus
ENSGALG00000010783	CPSF2	100	86.041	ENSMAMG00000004235	cpsf2	100	86.041	Mastacembelus_armatus
ENSGALG00000010783	CPSF2	100	86.168	ENSMZEG00005001769	cpsf2	100	86.168	Maylandia_zebra
ENSGALG00000010783	CPSF2	100	99.745	ENSMGAG00000013122	CPSF2	100	99.745	Meleagris_gallopavo
ENSGALG00000010783	CPSF2	100	95.913	ENSMAUG00000015160	Cpsf2	100	95.402	Mesocricetus_auratus
ENSGALG00000010783	CPSF2	100	96.296	ENSMICG00000016441	CPSF2	100	95.785	Microcebus_murinus
ENSGALG00000010783	CPSF2	100	95.913	ENSMOCG00000015372	Cpsf2	100	95.402	Microtus_ochrogaster
ENSGALG00000010783	CPSF2	100	81.091	ENSMMOG00000015590	cpsf2	100	81.091	Mola_mola
ENSGALG00000010783	CPSF2	100	96.552	ENSMODG00000002042	CPSF2	100	96.041	Monodelphis_domestica
ENSGALG00000010783	CPSF2	100	82.741	ENSMALG00000022275	cpsf2	100	82.741	Monopterus_albus
ENSGALG00000010783	CPSF2	100	95.275	ENSMUSG00000041781	Cpsf2	100	94.764	Mus_musculus
ENSGALG00000010783	CPSF2	100	95.530	MGP_PahariEiJ_G0029791	Cpsf2	100	95.019	Mus_pahari
ENSGALG00000010783	CPSF2	100	95.275	MGP_SPRETEiJ_G0018877	Cpsf2	100	94.764	Mus_spretus
ENSGALG00000010783	CPSF2	100	96.041	ENSMPUG00000007617	CPSF2	98	95.530	Mustela_putorius_furo
ENSGALG00000010783	CPSF2	100	95.785	ENSMLUG00000005570	CPSF2	100	95.275	Myotis_lucifugus
ENSGALG00000010783	CPSF2	100	96.296	ENSNGAG00000020312	Cpsf2	100	95.785	Nannospalax_galili
ENSGALG00000010783	CPSF2	100	86.312	ENSNBRG00000022402	cpsf2	100	86.312	Neolamprologus_brichardi
ENSGALG00000010783	CPSF2	100	95.147	ENSNLEG00000017132	CPSF2	100	94.636	Nomascus_leucogenys
ENSGALG00000010783	CPSF2	91	99.029	ENSMEUG00000008138	CPSF2	91	99.029	Notamacropus_eugenii
ENSGALG00000010783	CPSF2	94	89.344	ENSOPRG00000008484	-	100	89.344	Ochotona_princeps
ENSGALG00000010783	CPSF2	100	96.041	ENSODEG00000008682	CPSF2	100	95.530	Octodon_degus
ENSGALG00000010783	CPSF2	100	86.675	ENSONIG00000005901	cpsf2	100	86.675	Oreochromis_niloticus
ENSGALG00000010783	CPSF2	100	96.296	ENSOANG00000003822	CPSF2	100	95.785	Ornithorhynchus_anatinus
ENSGALG00000010783	CPSF2	100	96.169	ENSOCUG00000005713	CPSF2	100	95.658	Oryctolagus_cuniculus
ENSGALG00000010783	CPSF2	100	80.076	ENSORLG00000011628	cpsf2	100	80.076	Oryzias_latipes
ENSGALG00000010783	CPSF2	100	85.025	ENSORLG00020016980	cpsf2	100	85.025	Oryzias_latipes_hni
ENSGALG00000010783	CPSF2	100	85.025	ENSORLG00015011910	cpsf2	100	85.025	Oryzias_latipes_hsok
ENSGALG00000010783	CPSF2	100	84.557	ENSOMEG00000022876	cpsf2	100	84.557	Oryzias_melastigma
ENSGALG00000010783	CPSF2	100	93.376	ENSOARG00000012889	CPSF2	100	92.866	Ovis_aries
ENSGALG00000010783	CPSF2	100	96.041	ENSPPAG00000039666	CPSF2	100	95.530	Pan_paniscus
ENSGALG00000010783	CPSF2	99	95.908	ENSPPRG00000010869	CPSF2	100	95.396	Panthera_pardus
ENSGALG00000010783	CPSF2	100	95.913	ENSPTIG00000021202	CPSF2	100	95.402	Panthera_tigris_altaica
ENSGALG00000010783	CPSF2	100	96.041	ENSPTRG00000006651	CPSF2	100	95.530	Pan_troglodytes
ENSGALG00000010783	CPSF2	100	96.169	ENSPANG00000017417	CPSF2	100	95.658	Papio_anubis
ENSGALG00000010783	CPSF2	100	81.957	ENSPKIG00000021453	cpsf2	100	81.703	Paramormyrops_kingsleyae
ENSGALG00000010783	CPSF2	100	96.807	ENSPSIG00000006289	CPSF2	100	96.807	Pelodiscus_sinensis
ENSGALG00000010783	CPSF2	76	80.233	ENSPMGG00000002511	cpsf2	100	80.233	Periophthalmus_magnuspinnatus
ENSGALG00000010783	CPSF2	100	96.041	ENSPEMG00000007917	Cpsf2	100	95.530	Peromyscus_maniculatus_bairdii
ENSGALG00000010783	CPSF2	100	74.083	ENSPMAG00000006205	cpsf2	100	74.083	Petromyzon_marinus
ENSGALG00000010783	CPSF2	100	96.552	ENSPCIG00000011393	CPSF2	100	96.041	Phascolarctos_cinereus
ENSGALG00000010783	CPSF2	100	85.533	ENSPFOG00000018648	cpsf2	100	85.533	Poecilia_formosa
ENSGALG00000010783	CPSF2	100	85.533	ENSPLAG00000019199	cpsf2	99	85.533	Poecilia_latipinna
ENSGALG00000010783	CPSF2	96	85.771	ENSPMEG00000012100	cpsf2	100	85.141	Poecilia_mexicana
ENSGALG00000010783	CPSF2	100	85.533	ENSPREG00000008960	cpsf2	100	85.533	Poecilia_reticulata
ENSGALG00000010783	CPSF2	63	94.567	ENSPPYG00000029685	-	100	94.567	Pongo_abelii
ENSGALG00000010783	CPSF2	100	95.913	ENSPCAG00000012477	CPSF2	100	95.913	Procavia_capensis
ENSGALG00000010783	CPSF2	100	96.169	ENSPCOG00000026387	CPSF2	100	95.658	Propithecus_coquereli
ENSGALG00000010783	CPSF2	65	97.959	ENSPVAG00000004223	CPSF2	65	97.959	Pteropus_vampyrus
ENSGALG00000010783	CPSF2	100	86.185	ENSPNYG00000023356	cpsf2	100	86.185	Pundamilia_nyererei
ENSGALG00000010783	CPSF2	100	87.166	ENSPNAG00000001849	cpsf2	100	86.785	Pygocentrus_nattereri
ENSGALG00000010783	CPSF2	100	95.913	ENSRNOG00000005733	Cpsf2	100	95.402	Rattus_norvegicus
ENSGALG00000010783	CPSF2	100	96.169	ENSRBIG00000044792	CPSF2	100	95.658	Rhinopithecus_bieti
ENSGALG00000010783	CPSF2	100	96.169	ENSRROG00000034875	CPSF2	100	95.658	Rhinopithecus_roxellana
ENSGALG00000010783	CPSF2	100	96.041	ENSSBOG00000024571	CPSF2	100	95.530	Saimiri_boliviensis_boliviensis
ENSGALG00000010783	CPSF2	100	96.552	ENSSHAG00000010458	CPSF2	100	96.041	Sarcophilus_harrisii
ENSGALG00000010783	CPSF2	100	86.929	ENSSFOG00015002117	cpsf2	100	87.056	Scleropages_formosus
ENSGALG00000010783	CPSF2	100	84.343	ENSSMAG00000002001	cpsf2	100	84.284	Scophthalmus_maximus
ENSGALG00000010783	CPSF2	100	86.421	ENSSDUG00000004084	cpsf2	100	86.421	Seriola_dumerili
ENSGALG00000010783	CPSF2	100	86.312	ENSSLDG00000024330	cpsf2	100	85.914	Seriola_lalandi_dorsalis
ENSGALG00000010783	CPSF2	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSGALG00000010783	CPSF2	100	96.935	ENSSPUG00000013485	CPSF2	100	96.935	Sphenodon_punctatus
ENSGALG00000010783	CPSF2	100	85.406	ENSSPAG00000013284	cpsf2	100	85.406	Stegastes_partitus
ENSGALG00000010783	CPSF2	100	96.041	ENSSSCG00000002447	CPSF2	100	95.530	Sus_scrofa
ENSGALG00000010783	CPSF2	100	98.721	ENSTGUG00000012571	-	100	98.721	Taeniopygia_guttata
ENSGALG00000010783	CPSF2	100	85.660	ENSTRUG00000003742	cpsf2	100	85.152	Takifugu_rubripes
ENSGALG00000010783	CPSF2	100	84.684	ENSTNIG00000012228	cpsf2	100	84.810	Tetraodon_nigroviridis
ENSGALG00000010783	CPSF2	91	93.333	ENSTBEG00000004530	CPSF2	94	93.333	Tupaia_belangeri
ENSGALG00000010783	CPSF2	88	95.833	ENSTTRG00000008697	CPSF2	88	95.833	Tursiops_truncatus
ENSGALG00000010783	CPSF2	100	96.169	ENSUAMG00000028071	CPSF2	100	95.658	Ursus_americanus
ENSGALG00000010783	CPSF2	100	96.169	ENSUMAG00000005029	CPSF2	100	95.658	Ursus_maritimus
ENSGALG00000010783	CPSF2	99	96.036	ENSVPAG00000003503	CPSF2	100	95.524	Vicugna_pacos
ENSGALG00000010783	CPSF2	100	96.041	ENSVVUG00000024642	CPSF2	100	95.530	Vulpes_vulpes
ENSGALG00000010783	CPSF2	100	92.465	ENSXETG00000010289	cpsf2	100	92.082	Xenopus_tropicalis
ENSGALG00000010783	CPSF2	100	85.787	ENSXCOG00000001764	cpsf2	100	85.787	Xiphophorus_couchianus
ENSGALG00000010783	CPSF2	100	85.914	ENSXMAG00000017048	cpsf2	100	85.914	Xiphophorus_maculatus