EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000011000 (Gene tree)
Gene ID: 421517
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 32622 bases
Position: chr3:38524569-38557190
Accession: 11568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000017892	SpoU_methylase	PF00588.19	4.1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
					(aa)

Gene Model

Click here to download ENSGALG00000011000's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000011000's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000011000	TARBP1	100	64.600	ENSG00000059588	TARBP1	97	64.800	Homo_sapiens
ENSGALG00000011000	TARBP1	99	40.813	ENSAPOG00000016419	si:dkey-85a20.4	84	43.369	Acanthochromis_polyacanthus
ENSGALG00000011000	TARBP1	85	61.898	ENSAMEG00000003359	TARBP1	99	61.898	Ailuropoda_melanoleuca
ENSGALG00000011000	TARBP1	99	43.968	ENSATEG00000020266	si:dkey-85a20.4	80	50.301	Anabas_testudineus
ENSGALG00000011000	TARBP1	84	77.193	ENSAPLG00000007666	TARBP1	99	75.455	Anas_platyrhynchos
ENSGALG00000011000	TARBP1	99	58.867	ENSACAG00000001142	TARBP1	99	57.872	Anolis_carolinensis
ENSGALG00000011000	TARBP1	87	65.100	ENSANAG00000022031	TARBP1	86	65.300	Aotus_nancymaae
ENSGALG00000011000	TARBP1	95	73.161	ENSBTAG00000004517	TARBP1	99	73.161	Bos_taurus
ENSGALG00000011000	TARBP1	100	59.594	ENSCJAG00000018155	TARBP1	99	58.820	Callithrix_jacchus
ENSGALG00000011000	TARBP1	89	62.491	ENSCAFG00000011533	TARBP1	99	61.987	Canis_familiaris
ENSGALG00000011000	TARBP1	88	62.333	ENSCAFG00020027141	TARBP1	99	59.055	Canis_lupus_dingo
ENSGALG00000011000	TARBP1	99	57.415	ENSCHIG00000011437	TARBP1	99	57.345	Capra_hircus
ENSGALG00000011000	TARBP1	82	72.243	ENSTSYG00000010382	TARBP1	93	72.243	Carlito_syrichta
ENSGALG00000011000	TARBP1	79	58.091	ENSCAPG00000010831	TARBP1	99	58.091	Cavia_aperea
ENSGALG00000011000	TARBP1	99	56.433	ENSCPOG00000013995	TARBP1	99	55.652	Cavia_porcellus
ENSGALG00000011000	TARBP1	100	64.100	ENSCCAG00000037278	TARBP1	97	64.300	Cebus_capucinus
ENSGALG00000011000	TARBP1	100	60.233	ENSCATG00000011754	TARBP1	99	59.411	Cercocebus_atys
ENSGALG00000011000	TARBP1	81	60.886	ENSCLAG00000003655	TARBP1	96	60.886	Chinchilla_lanigera
ENSGALG00000011000	TARBP1	80	64.009	ENSCSAG00000010100	TARBP1	99	64.009	Chlorocebus_sabaeus
ENSGALG00000011000	TARBP1	94	68.954	ENSCPBG00000005587	TARBP1	99	68.886	Chrysemys_picta_bellii
ENSGALG00000011000	TARBP1	85	63.470	ENSCANG00000034343	TARBP1	99	63.470	Colobus_angolensis_palliatus
ENSGALG00000011000	TARBP1	99	57.760	ENSCGRG00001016690	Tarbp1	99	57.367	Cricetulus_griseus_chok1gshd
ENSGALG00000011000	TARBP1	89	59.189	ENSCGRG00000016893	Tarbp1	96	59.270	Cricetulus_griseus_crigri
ENSGALG00000011000	TARBP1	97	43.158	ENSCSEG00000005255	si:dkey-85a20.4	84	46.107	Cynoglossus_semilaevis
ENSGALG00000011000	TARBP1	99	44.320	ENSDARG00000079055	si:dkey-85a20.4	99	53.952	Danio_rerio
ENSGALG00000011000	TARBP1	99	64.772	ENSDNOG00000008637	TARBP1	97	64.542	Dasypus_novemcinctus
ENSGALG00000011000	TARBP1	81	59.132	ENSDORG00000007984	Tarbp1	99	65.574	Dipodomys_ordii
ENSGALG00000011000	TARBP1	99	65.091	ENSEASG00005000252	TARBP1	96	65.091	Equus_asinus_asinus
ENSGALG00000011000	TARBP1	99	64.889	ENSECAG00000023673	TARBP1	96	65.191	Equus_caballus
ENSGALG00000011000	TARBP1	86	43.295	ENSELUG00000012193	si:dkey-85a20.4	85	43.096	Esox_lucius
ENSGALG00000011000	TARBP1	99	56.863	ENSFCAG00000014183	TARBP1	99	55.787	Felis_catus
ENSGALG00000011000	TARBP1	81	79.570	ENSFALG00000013565	TARBP1	100	79.573	Ficedula_albicollis
ENSGALG00000011000	TARBP1	80	59.633	ENSFDAG00000001308	TARBP1	99	59.542	Fukomys_damarensis
ENSGALG00000011000	TARBP1	99	37.053	ENSFHEG00000007565	si:dkey-85a20.4	75	52.958	Fundulus_heteroclitus
ENSGALG00000011000	TARBP1	86	41.977	ENSGMOG00000004549	si:dkey-85a20.4	98	42.282	Gadus_morhua
ENSGALG00000011000	TARBP1	99	40.973	ENSGAFG00000007387	si:dkey-85a20.4	84	44.444	Gambusia_affinis
ENSGALG00000011000	TARBP1	86	47.714	ENSGACG00000005865	si:dkey-85a20.4	92	49.688	Gasterosteus_aculeatus
ENSGALG00000011000	TARBP1	100	70.431	ENSGAGG00000012102	TARBP1	100	70.241	Gopherus_agassizii
ENSGALG00000011000	TARBP1	86	71.779	ENSGGOG00000022879	TARBP1	99	61.477	Gorilla_gorilla
ENSGALG00000011000	TARBP1	97	46.784	ENSHBUG00000008877	si:dkey-85a20.4	84	45.323	Haplochromis_burtoni
ENSGALG00000011000	TARBP1	99	61.833	ENSHGLG00000011592	TARBP1	96	61.833	Heterocephalus_glaber_female
ENSGALG00000011000	TARBP1	94	67.847	ENSHGLG00100015169	TARBP1	91	70.948	Heterocephalus_glaber_male
ENSGALG00000011000	TARBP1	96	42.936	ENSIPUG00000005249	si:dkey-85a20.4	82	42.784	Ictalurus_punctatus
ENSGALG00000011000	TARBP1	84	58.346	ENSSTOG00000032291	TARBP1	92	69.900	Ictidomys_tridecemlineatus
ENSGALG00000011000	TARBP1	91	56.808	ENSJJAG00000017840	Tarbp1	94	56.808	Jaculus_jaculus
ENSGALG00000011000	TARBP1	89	46.806	ENSKMAG00000017546	si:dkey-85a20.4	79	46.806	Kryptolebias_marmoratus
ENSGALG00000011000	TARBP1	73	50.067	ENSLBEG00000012132	si:dkey-85a20.4	77	50.269	Labrus_bergylta
ENSGALG00000011000	TARBP1	99	49.604	ENSLACG00000004337	TARBP1	84	53.421	Latimeria_chalumnae
ENSGALG00000011000	TARBP1	99	43.222	ENSLOCG00000016214	si:dkey-85a20.4	83	47.131	Lepisosteus_oculatus
ENSGALG00000011000	TARBP1	96	60.467	ENSLAFG00000011394	TARBP1	96	64.995	Loxodonta_africana
ENSGALG00000011000	TARBP1	100	56.895	ENSMFAG00000041068	TARBP1	97	64.500	Macaca_fascicularis
ENSGALG00000011000	TARBP1	100	58.185	ENSMMUG00000021703	TARBP1	97	64.500	Macaca_mulatta
ENSGALG00000011000	TARBP1	100	59.975	ENSMNEG00000045002	TARBP1	97	64.500	Macaca_nemestrina
ENSGALG00000011000	TARBP1	85	63.409	ENSMLEG00000044182	TARBP1	99	63.409	Mandrillus_leucophaeus
ENSGALG00000011000	TARBP1	95	42.313	ENSMAMG00000021760	si:dkey-85a20.4	84	44.331	Mastacembelus_armatus
ENSGALG00000011000	TARBP1	97	46.784	ENSMZEG00005005751	si:dkey-85a20.4	84	45.323	Maylandia_zebra
ENSGALG00000011000	TARBP1	99	59.540	ENSMAUG00000020968	Tarbp1	96	59.540	Mesocricetus_auratus
ENSGALG00000011000	TARBP1	99	55.735	ENSMICG00000015280	TARBP1	99	54.484	Microcebus_murinus
ENSGALG00000011000	TARBP1	99	55.250	ENSMOCG00000004128	Tarbp1	99	54.984	Microtus_ochrogaster
ENSGALG00000011000	TARBP1	96	43.789	ENSMMOG00000007795	si:dkey-85a20.4	84	42.493	Mola_mola
ENSGALG00000011000	TARBP1	100	60.072	ENSMODG00000008504	TARBP1	100	59.590	Monodelphis_domestica
ENSGALG00000011000	TARBP1	96	45.992	ENSMALG00000002916	si:dkey-85a20.4	84	44.331	Monopterus_albus
ENSGALG00000011000	TARBP1	99	55.875	MGP_CAROLIEiJ_G0031729	Tarbp1	99	55.354	Mus_caroli
ENSGALG00000011000	TARBP1	99	56.125	ENSMUSG00000090290	Tarbp1	99	55.091	Mus_musculus
ENSGALG00000011000	TARBP1	99	56.269	MGP_PahariEiJ_G0023326	Tarbp1	99	55.750	Mus_pahari
ENSGALG00000011000	TARBP1	99	56.000	MGP_SPRETEiJ_G0032846	Tarbp1	99	54.966	Mus_spretus
ENSGALG00000011000	TARBP1	77	62.069	ENSMPUG00000002802	TARBP1	99	61.828	Mustela_putorius_furo
ENSGALG00000011000	TARBP1	85	65.839	ENSMLUG00000002414	TARBP1	95	65.839	Myotis_lucifugus
ENSGALG00000011000	TARBP1	100	60.442	ENSNLEG00000002518	TARBP1	96	65.100	Nomascus_leucogenys
ENSGALG00000011000	TARBP1	65	72.458	ENSMEUG00000011370	-	67	72.458	Notamacropus_eugenii
ENSGALG00000011000	TARBP1	70	69.435	ENSOPRG00000013822	TARBP1	71	69.435	Ochotona_princeps
ENSGALG00000011000	TARBP1	99	56.893	ENSODEG00000005238	TARBP1	99	57.036	Octodon_degus
ENSGALG00000011000	TARBP1	83	48.718	ENSONIG00000009789	si:dkey-85a20.4	97	45.238	Oreochromis_niloticus
ENSGALG00000011000	TARBP1	99	59.717	ENSOCUG00000017418	TARBP1	99	58.538	Oryctolagus_cuniculus
ENSGALG00000011000	TARBP1	97	44.870	ENSORLG00000010529	si:dkey-85a20.4	84	44.421	Oryzias_latipes
ENSGALG00000011000	TARBP1	97	45.031	ENSORLG00020019264	si:dkey-85a20.4	84	44.261	Oryzias_latipes_hni
ENSGALG00000011000	TARBP1	97	44.595	ENSORLG00015003276	si:dkey-85a20.4	84	43.768	Oryzias_latipes_hsok
ENSGALG00000011000	TARBP1	99	58.606	ENSOGAG00000002379	TARBP1	99	57.557	Otolemur_garnettii
ENSGALG00000011000	TARBP1	89	59.554	ENSOARG00000003434	TARBP1	95	59.749	Ovis_aries
ENSGALG00000011000	TARBP1	85	72.555	ENSPPAG00000028097	TARBP1	99	63.842	Pan_paniscus
ENSGALG00000011000	TARBP1	99	57.416	ENSPPRG00000013561	TARBP1	92	61.334	Panthera_pardus
ENSGALG00000011000	TARBP1	84	60.386	ENSPTIG00000009281	TARBP1	99	60.608	Panthera_tigris_altaica
ENSGALG00000011000	TARBP1	100	64.600	ENSPTRG00000002124	TARBP1	97	64.800	Pan_troglodytes
ENSGALG00000011000	TARBP1	100	60.037	ENSPANG00000021933	TARBP1	97	64.600	Papio_anubis
ENSGALG00000011000	TARBP1	99	47.065	ENSPKIG00000016716	si:dkey-85a20.4	79	51.603	Paramormyrops_kingsleyae
ENSGALG00000011000	TARBP1	80	71.108	ENSPSIG00000010699	TARBP1	100	70.333	Pelodiscus_sinensis
ENSGALG00000011000	TARBP1	99	59.986	ENSPEMG00000006888	Tarbp1	94	59.986	Peromyscus_maniculatus_bairdii
ENSGALG00000011000	TARBP1	92	83.981	ENSPCIG00000029710	TARBP1	99	83.981	Phascolarctos_cinereus
ENSGALG00000011000	TARBP1	87	43.980	ENSPFOG00000013020	si:dkey-85a20.4	98	44.046	Poecilia_formosa
ENSGALG00000011000	TARBP1	99	40.815	ENSPLAG00000006044	si:dkey-85a20.4	84	44.006	Poecilia_latipinna
ENSGALG00000011000	TARBP1	99	40.901	ENSPMEG00000017857	si:dkey-85a20.4	84	44.006	Poecilia_mexicana
ENSGALG00000011000	TARBP1	99	41.348	ENSPREG00000022753	si:dkey-85a20.4	84	44.229	Poecilia_reticulata
ENSGALG00000011000	TARBP1	90	61.490	ENSPPYG00000000102	TARBP1	99	61.580	Pongo_abelii
ENSGALG00000011000	TARBP1	89	63.258	ENSPCAG00000004808	TARBP1	85	63.258	Procavia_capensis
ENSGALG00000011000	TARBP1	99	58.544	ENSPCOG00000005666	TARBP1	96	62.111	Propithecus_coquereli
ENSGALG00000011000	TARBP1	99	50.310	ENSPVAG00000014798	TARBP1	99	50.961	Pteropus_vampyrus
ENSGALG00000011000	TARBP1	99	42.125	ENSPNYG00000019135	si:dkey-85a20.4	83	45.381	Pundamilia_nyererei
ENSGALG00000011000	TARBP1	99	53.188	ENSRNOG00000053574	Tarbp1	99	52.378	Rattus_norvegicus
ENSGALG00000011000	TARBP1	89	58.547	ENSRBIG00000043362	TARBP1	97	58.513	Rhinopithecus_bieti
ENSGALG00000011000	TARBP1	100	64.500	ENSRROG00000029527	TARBP1	96	64.500	Rhinopithecus_roxellana
ENSGALG00000011000	TARBP1	84	62.666	ENSSBOG00000034503	TARBP1	97	62.666	Saimiri_boliviensis_boliviensis
ENSGALG00000011000	TARBP1	84	64.438	ENSSHAG00000000013	TARBP1	99	64.438	Sarcophilus_harrisii
ENSGALG00000011000	TARBP1	85	45.501	ENSSFOG00015002660	si:dkey-85a20.4	97	43.475	Scleropages_formosus
ENSGALG00000011000	TARBP1	99	45.500	ENSSMAG00000007081	si:dkey-85a20.4	79	52.632	Scophthalmus_maximus
ENSGALG00000011000	TARBP1	99	41.129	ENSSDUG00000023566	si:dkey-85a20.4	83	43.847	Seriola_dumerili
ENSGALG00000011000	TARBP1	99	41.941	ENSSLDG00000020200	si:dkey-85a20.4	84	44.840	Seriola_lalandi_dorsalis
ENSGALG00000011000	TARBP1	89	73.488	ENSSARG00000012207	TARBP1	88	73.488	Sorex_araneus
ENSGALG00000011000	TARBP1	100	66.242	ENSSPUG00000015364	TARBP1	100	65.689	Sphenodon_punctatus
ENSGALG00000011000	TARBP1	99	44.896	ENSSPAG00000007213	si:dkey-85a20.4	83	43.269	Stegastes_partitus
ENSGALG00000011000	TARBP1	95	63.041	ENSSSCG00000010160	TARBP1	96	63.380	Sus_scrofa
ENSGALG00000011000	TARBP1	81	79.878	ENSTGUG00000010214	TARBP1	100	77.464	Taeniopygia_guttata
ENSGALG00000011000	TARBP1	91	42.522	ENSTNIG00000016586	si:dkey-85a20.4	99	44.818	Tetraodon_nigroviridis
ENSGALG00000011000	TARBP1	89	62.609	ENSTTRG00000008707	TARBP1	87	62.717	Tursiops_truncatus
ENSGALG00000011000	TARBP1	84	59.805	ENSUMAG00000006730	TARBP1	98	61.498	Ursus_maritimus
ENSGALG00000011000	TARBP1	70	85.417	ENSVPAG00000007665	TARBP1	74	85.417	Vicugna_pacos
ENSGALG00000011000	TARBP1	87	62.010	ENSVVUG00000007460	TARBP1	99	61.120	Vulpes_vulpes
ENSGALG00000011000	TARBP1	85	60.883	ENSXETG00000016224	tarbp1	95	60.883	Xenopus_tropicalis
ENSGALG00000011000	TARBP1	80	49.863	ENSXCOG00000011779	si:dkey-85a20.4	91	49.863	Xiphophorus_couchianus
ENSGALG00000011000	TARBP1	64	59.649	ENSXMAG00000009600	si:dkey-85a20.4	91	59.649	Xiphophorus_maculatus