EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000011272 (Gene tree)
Gene ID: 420649
Gene Symbol: RAB5A
Alias: -
Full Name: Gallus gallus RAB5A%2C member RAS oncogene family (RAB5A)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 16943 bases
Position: chr2:35764554-35781496
Accession: NM_001006363
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000018371	MMR_HSR1	PF01926.23	8.4e-05	1	1
ENSGALP00000062187	MMR_HSR1	PF01926.23	8.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000018393	-	2356	XM_015281490	ENSGALP00000018371	215 (aa)	XP_015136976	Q5ZIP7
ENSGALT00000088079	-	2213	-	ENSGALP00000062187	215 (aa)	-	Q5ZIP7

Gene Model

Click here to download ENSGALG00000011272's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga04144	Endocytosis	KEGG
gga04145	Phagosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000011272's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000011272	RAB5A	100	95.814	ENSG00000144566	RAB5A	100	95.814	Homo_sapiens
ENSGALG00000011272	RAB5A	100	91.667	ENSAPOG00000021391	rab5aa	100	91.667	Acanthochromis_polyacanthus
ENSGALG00000011272	RAB5A	100	96.744	ENSAMEG00000000954	RAB5A	100	96.744	Ailuropoda_melanoleuca
ENSGALG00000011272	RAB5A	100	92.130	ENSACIG00000019251	rab5aa	100	92.130	Amphilophus_citrinellus
ENSGALG00000011272	RAB5A	100	92.593	ENSAOCG00000000090	rab5aa	100	92.593	Amphiprion_ocellaris
ENSGALG00000011272	RAB5A	100	92.593	ENSAPEG00000013376	rab5aa	100	92.593	Amphiprion_percula
ENSGALG00000011272	RAB5A	100	92.130	ENSATEG00000014748	rab5aa	100	92.130	Anabas_testudineus
ENSGALG00000011272	RAB5A	100	96.744	ENSACAG00000000017	RAB5A	100	96.744	Anolis_carolinensis
ENSGALG00000011272	RAB5A	100	96.744	ENSANAG00000025120	RAB5A	100	96.744	Aotus_nancymaae
ENSGALG00000011272	RAB5A	100	92.593	ENSACLG00000018066	rab5aa	100	92.593	Astatotilapia_calliptera
ENSGALG00000011272	RAB5A	100	91.667	ENSAMXG00000036179	rab5aa	100	91.667	Astyanax_mexicanus
ENSGALG00000011272	RAB5A	100	91.244	ENSAMXG00000035919	rab5ab	100	91.244	Astyanax_mexicanus
ENSGALG00000011272	RAB5A	100	96.279	ENSBTAG00000046385	RAB5A	100	96.279	Bos_taurus
ENSGALG00000011272	RAB5A	100	96.744	ENSCJAG00000048394	RAB5A	100	96.744	Callithrix_jacchus
ENSGALG00000011272	RAB5A	100	96.744	ENSCAFG00000005814	RAB5A	100	96.744	Canis_familiaris
ENSGALG00000011272	RAB5A	100	96.744	ENSCAFG00020027287	RAB5A	100	96.744	Canis_lupus_dingo
ENSGALG00000011272	RAB5A	100	95.814	ENSCHIG00000025419	-	100	95.814	Capra_hircus
ENSGALG00000011272	RAB5A	100	96.279	ENSTSYG00000007642	-	100	96.279	Carlito_syrichta
ENSGALG00000011272	RAB5A	100	90.233	ENSTSYG00000030238	-	100	90.233	Carlito_syrichta
ENSGALG00000011272	RAB5A	100	96.744	ENSCCAG00000022405	RAB5A	100	96.744	Cebus_capucinus
ENSGALG00000011272	RAB5A	100	96.744	ENSCATG00000033588	-	100	96.744	Cercocebus_atys
ENSGALG00000011272	RAB5A	100	95.814	ENSCLAG00000006053	-	100	95.814	Chinchilla_lanigera
ENSGALG00000011272	RAB5A	100	96.744	ENSCSAG00000009831	RAB5A	100	96.744	Chlorocebus_sabaeus
ENSGALG00000011272	RAB5A	100	96.744	ENSCPBG00000022559	RAB5A	100	96.744	Chrysemys_picta_bellii
ENSGALG00000011272	RAB5A	100	96.744	ENSCANG00000043514	RAB5A	100	96.744	Colobus_angolensis_palliatus
ENSGALG00000011272	RAB5A	100	95.349	ENSCGRG00001020018	-	100	95.349	Cricetulus_griseus_chok1gshd
ENSGALG00000011272	RAB5A	100	95.349	ENSCGRG00000002786	-	100	95.349	Cricetulus_griseus_crigri
ENSGALG00000011272	RAB5A	99	92.093	ENSCVAG00000008239	rab5aa	99	92.093	Cyprinodon_variegatus
ENSGALG00000011272	RAB5A	100	92.130	ENSDARG00000018602	rab5aa	100	92.130	Danio_rerio
ENSGALG00000011272	RAB5A	99	91.628	ENSDARG00000007257	rab5ab	99	91.628	Danio_rerio
ENSGALG00000011272	RAB5A	100	96.279	ENSDNOG00000038467	RAB5A	100	96.279	Dasypus_novemcinctus
ENSGALG00000011272	RAB5A	100	96.744	ENSDORG00000024958	-	100	96.744	Dipodomys_ordii
ENSGALG00000011272	RAB5A	100	96.279	ENSEASG00005005818	RAB5A	100	96.279	Equus_asinus_asinus
ENSGALG00000011272	RAB5A	100	96.744	ENSECAG00000019062	RAB5A	100	96.744	Equus_caballus
ENSGALG00000011272	RAB5A	100	95.814	ENSEEUG00000009044	RAB5A	100	95.814	Erinaceus_europaeus
ENSGALG00000011272	RAB5A	100	92.130	ENSELUG00000006462	rab5aa	100	92.130	Esox_lucius
ENSGALG00000011272	RAB5A	99	91.163	ENSELUG00000013436	rab5ab	99	91.163	Esox_lucius
ENSGALG00000011272	RAB5A	100	96.744	ENSFCAG00000039795	-	100	96.744	Felis_catus
ENSGALG00000011272	RAB5A	100	99.535	ENSFALG00000009239	RAB5A	100	99.535	Ficedula_albicollis
ENSGALG00000011272	RAB5A	100	95.814	ENSFDAG00000005631	-	100	95.814	Fukomys_damarensis
ENSGALG00000011272	RAB5A	99	93.023	ENSFHEG00000014070	rab5aa	99	93.023	Fundulus_heteroclitus
ENSGALG00000011272	RAB5A	84	94.475	ENSGMOG00000007127	RAB5A	99	94.475	Gadus_morhua
ENSGALG00000011272	RAB5A	99	90.698	ENSGMOG00000002868	rab5aa	99	90.698	Gadus_morhua
ENSGALG00000011272	RAB5A	99	92.093	ENSGAFG00000011619	rab5aa	99	92.093	Gambusia_affinis
ENSGALG00000011272	RAB5A	100	90.741	ENSGACG00000004997	rab5aa	100	90.741	Gasterosteus_aculeatus
ENSGALG00000011272	RAB5A	100	97.209	ENSGAGG00000005319	RAB5A	100	97.209	Gopherus_agassizii
ENSGALG00000011272	RAB5A	100	95.814	ENSGGOG00000015981	RAB5A	100	95.814	Gorilla_gorilla
ENSGALG00000011272	RAB5A	100	92.593	ENSHBUG00000003752	rab5aa	100	92.593	Haplochromis_burtoni
ENSGALG00000011272	RAB5A	99	88.318	ENSHGLG00000017749	-	97	88.318	Heterocephalus_glaber_female
ENSGALG00000011272	RAB5A	96	97.585	ENSHGLG00000006357	-	99	97.585	Heterocephalus_glaber_female
ENSGALG00000011272	RAB5A	100	96.744	ENSHGLG00100007553	RAB5A	100	96.744	Heterocephalus_glaber_male
ENSGALG00000011272	RAB5A	99	88.318	ENSHGLG00100008816	-	97	88.318	Heterocephalus_glaber_male
ENSGALG00000011272	RAB5A	100	90.783	ENSIPUG00000023392	rab5a	100	90.783	Ictalurus_punctatus
ENSGALG00000011272	RAB5A	100	96.279	ENSSTOG00000026229	RAB5A	100	96.279	Ictidomys_tridecemlineatus
ENSGALG00000011272	RAB5A	100	94.884	ENSJJAG00000020190	Rab5a	100	94.884	Jaculus_jaculus
ENSGALG00000011272	RAB5A	100	92.130	ENSKMAG00000005111	rab5aa	100	92.130	Kryptolebias_marmoratus
ENSGALG00000011272	RAB5A	98	92.381	ENSLBEG00000002516	rab5aa	93	92.381	Labrus_bergylta
ENSGALG00000011272	RAB5A	100	93.519	ENSLACG00000004663	RAB5A	100	93.519	Latimeria_chalumnae
ENSGALG00000011272	RAB5A	100	93.981	ENSLOCG00000006591	rab5ab	100	93.981	Lepisosteus_oculatus
ENSGALG00000011272	RAB5A	100	96.279	ENSLAFG00000008321	RAB5A	100	96.279	Loxodonta_africana
ENSGALG00000011272	RAB5A	100	96.744	ENSMFAG00000002326	RAB5A	100	96.744	Macaca_fascicularis
ENSGALG00000011272	RAB5A	83	97.765	ENSMMUG00000006992	RAB5A	91	97.765	Macaca_mulatta
ENSGALG00000011272	RAB5A	69	95.302	ENSMMUG00000032398	-	87	95.302	Macaca_mulatta
ENSGALG00000011272	RAB5A	100	96.744	ENSMNEG00000039149	-	100	96.744	Macaca_nemestrina
ENSGALG00000011272	RAB5A	100	96.744	ENSMLEG00000028944	RAB5A	100	96.744	Mandrillus_leucophaeus
ENSGALG00000011272	RAB5A	100	92.593	ENSMAMG00000012573	rab5aa	100	92.593	Mastacembelus_armatus
ENSGALG00000011272	RAB5A	100	92.593	ENSMZEG00005005205	rab5aa	100	92.593	Maylandia_zebra
ENSGALG00000011272	RAB5A	100	99.535	ENSMGAG00000010961	RAB5A	100	99.535	Meleagris_gallopavo
ENSGALG00000011272	RAB5A	100	96.279	ENSMAUG00000011242	-	100	96.279	Mesocricetus_auratus
ENSGALG00000011272	RAB5A	100	96.744	ENSMICG00000049130	RAB5A	100	96.744	Microcebus_murinus
ENSGALG00000011272	RAB5A	100	96.279	ENSMOCG00000009706	Rab5a	100	96.279	Microtus_ochrogaster
ENSGALG00000011272	RAB5A	100	92.130	ENSMMOG00000019135	rab5aa	100	92.130	Mola_mola
ENSGALG00000011272	RAB5A	100	96.279	ENSMODG00000014793	RAB5A	100	96.279	Monodelphis_domestica
ENSGALG00000011272	RAB5A	100	92.130	ENSMALG00000014929	rab5aa	100	92.130	Monopterus_albus
ENSGALG00000011272	RAB5A	100	96.279	MGP_CAROLIEiJ_G0021741	Rab5a	100	96.279	Mus_caroli
ENSGALG00000011272	RAB5A	100	96.279	ENSMUSG00000017831	Rab5a	100	96.279	Mus_musculus
ENSGALG00000011272	RAB5A	87	94.624	MGP_PahariEiJ_G0020730	Rab5a	99	94.624	Mus_pahari
ENSGALG00000011272	RAB5A	100	96.744	ENSMPUG00000013147	RAB5A	100	96.744	Mustela_putorius_furo
ENSGALG00000011272	RAB5A	100	96.744	ENSMLUG00000011716	RAB5A	100	96.744	Myotis_lucifugus
ENSGALG00000011272	RAB5A	100	95.814	ENSNGAG00000021245	-	100	95.814	Nannospalax_galili
ENSGALG00000011272	RAB5A	100	92.593	ENSNBRG00000011763	rab5aa	100	92.593	Neolamprologus_brichardi
ENSGALG00000011272	RAB5A	100	96.279	ENSNLEG00000003434	RAB5A	100	96.279	Nomascus_leucogenys
ENSGALG00000011272	RAB5A	82	97.740	ENSOPRG00000011278	RAB5A	100	97.740	Ochotona_princeps
ENSGALG00000011272	RAB5A	68	98.630	ENSODEG00000000290	-	99	98.630	Octodon_degus
ENSGALG00000011272	RAB5A	87	87.895	ENSODEG00000019065	-	100	87.895	Octodon_degus
ENSGALG00000011272	RAB5A	100	92.593	ENSONIG00000002425	rab5aa	100	92.593	Oreochromis_niloticus
ENSGALG00000011272	RAB5A	99	95.283	ENSOANG00000004989	RAB5A	97	95.283	Ornithorhynchus_anatinus
ENSGALG00000011272	RAB5A	100	96.279	ENSOCUG00000012200	RAB5A	100	96.279	Oryctolagus_cuniculus
ENSGALG00000011272	RAB5A	100	92.593	ENSORLG00000012261	rab5aa	100	92.593	Oryzias_latipes
ENSGALG00000011272	RAB5A	100	92.593	ENSORLG00020020922	rab5aa	100	92.593	Oryzias_latipes_hni
ENSGALG00000011272	RAB5A	100	91.667	ENSORLG00015017737	rab5ab	100	91.667	Oryzias_latipes_hsok
ENSGALG00000011272	RAB5A	100	92.593	ENSORLG00015012854	rab5aa	100	92.593	Oryzias_latipes_hsok
ENSGALG00000011272	RAB5A	100	92.130	ENSOMEG00000010692	rab5aa	100	92.130	Oryzias_melastigma
ENSGALG00000011272	RAB5A	100	95.814	ENSOARG00000015722	RAB5A	100	95.814	Ovis_aries
ENSGALG00000011272	RAB5A	100	95.370	ENSPPAG00000041763	RAB5A	100	95.370	Pan_paniscus
ENSGALG00000011272	RAB5A	100	96.744	ENSPPRG00000001655	-	100	96.744	Panthera_pardus
ENSGALG00000011272	RAB5A	100	96.744	ENSPTIG00000021685	RAB5A	100	96.744	Panthera_tigris_altaica
ENSGALG00000011272	RAB5A	100	95.370	ENSPTRG00000014682	RAB5A	100	95.370	Pan_troglodytes
ENSGALG00000011272	RAB5A	100	96.744	ENSPANG00000001328	RAB5A	100	96.744	Papio_anubis
ENSGALG00000011272	RAB5A	100	92.593	ENSPKIG00000009578	rab5ab	100	92.593	Paramormyrops_kingsleyae
ENSGALG00000011272	RAB5A	100	89.352	ENSPKIG00000010291	RAB5A	100	89.352	Paramormyrops_kingsleyae
ENSGALG00000011272	RAB5A	100	97.674	ENSPSIG00000007157	RAB5A	100	97.674	Pelodiscus_sinensis
ENSGALG00000011272	RAB5A	100	91.667	ENSPMGG00000001915	rab5aa	100	91.667	Periophthalmus_magnuspinnatus
ENSGALG00000011272	RAB5A	100	97.209	ENSPCIG00000018321	RAB5A	100	97.209	Phascolarctos_cinereus
ENSGALG00000011272	RAB5A	99	92.558	ENSPFOG00000011263	rab5aa	99	92.558	Poecilia_formosa
ENSGALG00000011272	RAB5A	99	92.558	ENSPLAG00000017838	rab5aa	99	92.558	Poecilia_latipinna
ENSGALG00000011272	RAB5A	99	92.558	ENSPMEG00000007238	rab5aa	99	92.558	Poecilia_mexicana
ENSGALG00000011272	RAB5A	100	96.279	ENSPPYG00000014074	RAB5A	100	96.279	Pongo_abelii
ENSGALG00000011272	RAB5A	100	96.744	ENSPCOG00000013289	RAB5A	100	96.744	Propithecus_coquereli
ENSGALG00000011272	RAB5A	100	96.279	ENSPVAG00000006730	RAB5A	100	96.279	Pteropus_vampyrus
ENSGALG00000011272	RAB5A	100	92.593	ENSPNYG00000010612	rab5aa	100	92.593	Pundamilia_nyererei
ENSGALG00000011272	RAB5A	100	90.783	ENSPNAG00000009496	rab5ab	100	90.783	Pygocentrus_nattereri
ENSGALG00000011272	RAB5A	100	91.667	ENSPNAG00000023223	rab5aa	100	91.667	Pygocentrus_nattereri
ENSGALG00000011272	RAB5A	100	96.744	ENSRBIG00000036122	RAB5A	100	96.744	Rhinopithecus_bieti
ENSGALG00000011272	RAB5A	100	96.744	ENSRROG00000037687	RAB5A	100	96.744	Rhinopithecus_roxellana
ENSGALG00000011272	RAB5A	100	96.759	ENSSHAG00000006787	RAB5A	100	96.759	Sarcophilus_harrisii
ENSGALG00000011272	RAB5A	100	92.593	ENSSFOG00015014517	rab5a	100	92.593	Scleropages_formosus
ENSGALG00000011272	RAB5A	98	93.365	ENSSFOG00015021115	-	98	93.365	Scleropages_formosus
ENSGALG00000011272	RAB5A	100	92.130	ENSSMAG00000009229	rab5aa	100	92.130	Scophthalmus_maximus
ENSGALG00000011272	RAB5A	100	92.593	ENSSDUG00000009835	rab5aa	100	92.593	Seriola_dumerili
ENSGALG00000011272	RAB5A	100	92.593	ENSSLDG00000011069	rab5aa	100	92.593	Seriola_lalandi_dorsalis
ENSGALG00000011272	RAB5A	87	98.930	ENSSPUG00000001173	RAB5A	96	98.930	Sphenodon_punctatus
ENSGALG00000011272	RAB5A	100	92.593	ENSSPAG00000015678	rab5aa	100	92.593	Stegastes_partitus
ENSGALG00000011272	RAB5A	100	95.349	ENSSSCG00000037653	RAB5A	100	95.349	Sus_scrofa
ENSGALG00000011272	RAB5A	100	99.070	ENSTGUG00000003236	RAB5A	100	99.070	Taeniopygia_guttata
ENSGALG00000011272	RAB5A	99	91.628	ENSTRUG00000024368	rab5aa	99	91.628	Takifugu_rubripes
ENSGALG00000011272	RAB5A	100	91.667	ENSTNIG00000009196	rab5aa	100	91.667	Tetraodon_nigroviridis
ENSGALG00000011272	RAB5A	100	96.744	ENSTTRG00000001374	RAB5A	100	96.744	Tursiops_truncatus
ENSGALG00000011272	RAB5A	100	90.830	ENSUAMG00000027471	RAB5A	99	96.175	Ursus_americanus
ENSGALG00000011272	RAB5A	100	96.744	ENSUMAG00000018295	RAB5A	100	96.744	Ursus_maritimus
ENSGALG00000011272	RAB5A	100	96.744	ENSVVUG00000000489	RAB5A	100	96.744	Vulpes_vulpes
ENSGALG00000011272	RAB5A	100	93.519	ENSXETG00000002305	rab5a	100	93.519	Xenopus_tropicalis
ENSGALG00000011272	RAB5A	99	92.093	ENSXCOG00000020121	rab5aa	99	92.093	Xiphophorus_couchianus
ENSGALG00000011272	RAB5A	99	92.558	ENSXMAG00000028889	rab5aa	99	92.558	Xiphophorus_maculatus