EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000011652 (Gene tree)
Gene ID: 395955
Gene Symbol: TSN
Alias: C3PO
Full Name: translin
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 5439 bases
Position: chr7:26247147-26252585
Accession: 12379
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000019018	Translin	PF01997.16	8.2e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000019041	TSN-201	2003	-	ENSGALP00000019018	229 (aa)	-	F1NT44

Gene Model

Click here to download ENSGALG00000011652's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000011652's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000011652	TSN	100	86.463	ENSG00000211460	TSN	100	86.463	Homo_sapiens
ENSGALG00000011652	TSN	100	78.166	ENSAPOG00000002063	tsn	100	78.166	Acanthochromis_polyacanthus
ENSGALG00000011652	TSN	100	86.026	ENSAMEG00000005055	TSN	100	86.026	Ailuropoda_melanoleuca
ENSGALG00000011652	TSN	100	79.039	ENSACIG00000021694	tsn	100	79.039	Amphilophus_citrinellus
ENSGALG00000011652	TSN	100	78.166	ENSAOCG00000015574	tsn	100	79.710	Amphiprion_ocellaris
ENSGALG00000011652	TSN	100	78.166	ENSAPEG00000001677	tsn	100	78.166	Amphiprion_percula
ENSGALG00000011652	TSN	98	79.556	ENSATEG00000004115	tsn	99	79.556	Anabas_testudineus
ENSGALG00000011652	TSN	93	88.584	ENSACAG00000004757	TSN	99	88.584	Anolis_carolinensis
ENSGALG00000011652	TSN	100	86.900	ENSANAG00000026842	TSN	100	86.900	Aotus_nancymaae
ENSGALG00000011652	TSN	100	79.039	ENSACLG00000020831	tsn	100	79.039	Astatotilapia_calliptera
ENSGALG00000011652	TSN	100	77.293	ENSAMXG00000035417	tsn	100	77.293	Astyanax_mexicanus
ENSGALG00000011652	TSN	100	86.026	ENSBTAG00000006059	TSN	100	86.026	Bos_taurus
ENSGALG00000011652	TSN	100	86.900	ENSCJAG00000047222	-	100	86.900	Callithrix_jacchus
ENSGALG00000011652	TSN	100	86.463	ENSCJAG00000044533	-	100	86.463	Callithrix_jacchus
ENSGALG00000011652	TSN	99	85.965	ENSCAFG00000004700	TSN	94	85.965	Canis_familiaris
ENSGALG00000011652	TSN	100	86.026	ENSCAFG00020011747	TSN	100	86.026	Canis_lupus_dingo
ENSGALG00000011652	TSN	100	86.026	ENSCHIG00000010715	TSN	100	86.026	Capra_hircus
ENSGALG00000011652	TSN	100	86.026	ENSTSYG00000004395	TSN	100	86.026	Carlito_syrichta
ENSGALG00000011652	TSN	90	71.014	ENSCAPG00000015595	TSN	81	71.014	Cavia_aperea
ENSGALG00000011652	TSN	100	86.463	ENSCPOG00000035645	TSN	100	86.463	Cavia_porcellus
ENSGALG00000011652	TSN	100	86.463	ENSCCAG00000026371	TSN	100	86.463	Cebus_capucinus
ENSGALG00000011652	TSN	66	75.000	ENSCCAG00000034886	-	84	75.000	Cebus_capucinus
ENSGALG00000011652	TSN	100	86.463	ENSCATG00000032155	TSN	100	86.463	Cercocebus_atys
ENSGALG00000011652	TSN	100	86.463	ENSCLAG00000006171	TSN	100	86.463	Chinchilla_lanigera
ENSGALG00000011652	TSN	100	86.463	ENSCSAG00000016712	TSN	100	86.463	Chlorocebus_sabaeus
ENSGALG00000011652	TSN	97	79.638	ENSCPBG00000018116	-	96	79.638	Chrysemys_picta_bellii
ENSGALG00000011652	TSN	66	91.391	ENSCPBG00000013741	-	80	91.391	Chrysemys_picta_bellii
ENSGALG00000011652	TSN	95	46.789	ENSCING00000012612	-	100	46.789	Ciona_intestinalis
ENSGALG00000011652	TSN	95	45.872	ENSCSAVG00000009485	-	97	45.872	Ciona_savignyi
ENSGALG00000011652	TSN	100	86.463	ENSCANG00000041881	TSN	100	86.463	Colobus_angolensis_palliatus
ENSGALG00000011652	TSN	100	86.463	ENSCGRG00001018233	Tsn	100	86.463	Cricetulus_griseus_chok1gshd
ENSGALG00000011652	TSN	100	86.463	ENSCGRG00000008331	Tsn	100	86.463	Cricetulus_griseus_crigri
ENSGALG00000011652	TSN	97	78.733	ENSCSEG00000005825	tsn	97	78.733	Cynoglossus_semilaevis
ENSGALG00000011652	TSN	98	70.222	ENSCVAG00000022024	tsn	100	70.354	Cyprinodon_variegatus
ENSGALG00000011652	TSN	98	78.571	ENSDARG00000041830	tsn	99	78.571	Danio_rerio
ENSGALG00000011652	TSN	98	85.778	ENSDNOG00000025740	TSN	99	85.778	Dasypus_novemcinctus
ENSGALG00000011652	TSN	100	86.463	ENSDORG00000026251	-	100	86.463	Dipodomys_ordii
ENSGALG00000011652	TSN	94	52.558	FBgn0033528	trsn	91	52.558	Drosophila_melanogaster
ENSGALG00000011652	TSN	100	86.026	ENSEASG00005004774	TSN	100	86.026	Equus_asinus_asinus
ENSGALG00000011652	TSN	100	86.026	ENSECAG00000015930	TSN	100	86.026	Equus_caballus
ENSGALG00000011652	TSN	76	85.714	ENSEEUG00000013935	TSN	100	85.714	Erinaceus_europaeus
ENSGALG00000011652	TSN	100	78.166	ENSELUG00000007669	tsn	100	78.166	Esox_lucius
ENSGALG00000011652	TSN	74	65.089	ENSFCAG00000022306	-	94	66.071	Felis_catus
ENSGALG00000011652	TSN	100	86.026	ENSFCAG00000027149	TSN	100	86.026	Felis_catus
ENSGALG00000011652	TSN	91	95.215	ENSFALG00000013247	TSN	100	89.130	Ficedula_albicollis
ENSGALG00000011652	TSN	100	86.463	ENSFDAG00000012302	TSN	100	86.463	Fukomys_damarensis
ENSGALG00000011652	TSN	100	80.349	ENSFHEG00000015531	tsn	100	80.349	Fundulus_heteroclitus
ENSGALG00000011652	TSN	97	78.733	ENSGMOG00000009247	tsn	98	78.733	Gadus_morhua
ENSGALG00000011652	TSN	100	78.166	ENSGAFG00000003816	tsn	100	78.166	Gambusia_affinis
ENSGALG00000011652	TSN	97	79.638	ENSGACG00000000235	tsn	97	79.638	Gasterosteus_aculeatus
ENSGALG00000011652	TSN	100	86.463	ENSGGOG00000002216	TSN	99	87.500	Gorilla_gorilla
ENSGALG00000011652	TSN	100	78.166	ENSHBUG00000002340	tsn	85	78.166	Haplochromis_burtoni
ENSGALG00000011652	TSN	100	86.463	ENSHGLG00000007038	TSN	100	86.463	Heterocephalus_glaber_female
ENSGALG00000011652	TSN	100	86.463	ENSHGLG00100000069	TSN	100	86.463	Heterocephalus_glaber_male
ENSGALG00000011652	TSN	97	80.090	ENSHCOG00000001756	tsn	98	80.090	Hippocampus_comes
ENSGALG00000011652	TSN	100	79.039	ENSIPUG00000021370	tsn	100	79.039	Ictalurus_punctatus
ENSGALG00000011652	TSN	100	86.463	ENSSTOG00000000972	TSN	100	86.463	Ictidomys_tridecemlineatus
ENSGALG00000011652	TSN	100	86.026	ENSJJAG00000006730	Tsn	100	86.026	Jaculus_jaculus
ENSGALG00000011652	TSN	100	77.729	ENSKMAG00000004996	tsn	100	77.729	Kryptolebias_marmoratus
ENSGALG00000011652	TSN	96	79.545	ENSLBEG00000012620	tsn	97	79.545	Labrus_bergylta
ENSGALG00000011652	TSN	98	61.233	ENSLACG00000005246	TSN	99	61.233	Latimeria_chalumnae
ENSGALG00000011652	TSN	100	79.039	ENSLOCG00000002191	tsn	99	79.039	Lepisosteus_oculatus
ENSGALG00000011652	TSN	98	79.736	ENSLAFG00000032428	TSN	98	79.736	Loxodonta_africana
ENSGALG00000011652	TSN	100	86.463	ENSMFAG00000044217	TSN	100	86.463	Macaca_fascicularis
ENSGALG00000011652	TSN	100	86.463	ENSMMUG00000021119	TSN	100	86.463	Macaca_mulatta
ENSGALG00000011652	TSN	100	86.463	ENSMNEG00000040632	TSN	100	86.463	Macaca_nemestrina
ENSGALG00000011652	TSN	54	86.290	ENSMLEG00000038656	TSN	96	86.290	Mandrillus_leucophaeus
ENSGALG00000011652	TSN	100	79.039	ENSMAMG00000019536	tsn	100	79.039	Mastacembelus_armatus
ENSGALG00000011652	TSN	100	79.039	ENSMZEG00005018715	tsn	85	79.039	Maylandia_zebra
ENSGALG00000011652	TSN	77	97.175	ENSMGAG00000011956	TSN	90	97.175	Meleagris_gallopavo
ENSGALG00000011652	TSN	92	86.256	ENSMAUG00000018800	Tsn	100	87.440	Mesocricetus_auratus
ENSGALG00000011652	TSN	100	86.463	ENSMICG00000015793	TSN	100	86.463	Microcebus_murinus
ENSGALG00000011652	TSN	100	86.900	ENSMOCG00000013248	Tsn	100	86.900	Microtus_ochrogaster
ENSGALG00000011652	TSN	90	79.710	ENSMMOG00000019661	tsn	100	79.710	Mola_mola
ENSGALG00000011652	TSN	96	85.520	ENSMODG00000000147	TSN	100	83.913	Monodelphis_domestica
ENSGALG00000011652	TSN	100	79.476	ENSMALG00000001827	tsn	100	79.476	Monopterus_albus
ENSGALG00000011652	TSN	100	86.026	ENSMUSG00000026374	Tsn	100	86.026	Mus_musculus
ENSGALG00000011652	TSN	100	86.026	MGP_PahariEiJ_G0027742	Tsn	100	86.026	Mus_pahari
ENSGALG00000011652	TSN	100	86.026	MGP_SPRETEiJ_G0015313	Tsn	100	86.026	Mus_spretus
ENSGALG00000011652	TSN	100	86.026	ENSMPUG00000001056	TSN	100	86.026	Mustela_putorius_furo
ENSGALG00000011652	TSN	90	87.440	ENSMLUG00000012656	TSN	100	87.440	Myotis_lucifugus
ENSGALG00000011652	TSN	53	30.496	ENSMLUG00000028551	-	83	30.496	Myotis_lucifugus
ENSGALG00000011652	TSN	100	86.463	ENSNGAG00000010353	Tsn	100	86.463	Nannospalax_galili
ENSGALG00000011652	TSN	100	78.603	ENSNBRG00000001193	tsn	100	78.603	Neolamprologus_brichardi
ENSGALG00000011652	TSN	100	86.463	ENSNLEG00000032773	TSN	100	86.463	Nomascus_leucogenys
ENSGALG00000011652	TSN	98	64.889	ENSMEUG00000006228	TSN	99	64.889	Notamacropus_eugenii
ENSGALG00000011652	TSN	61	72.662	ENSOPRG00000004858	-	99	72.662	Ochotona_princeps
ENSGALG00000011652	TSN	100	86.463	ENSODEG00000008386	-	100	86.463	Octodon_degus
ENSGALG00000011652	TSN	100	68.559	ENSODEG00000005998	-	100	68.559	Octodon_degus
ENSGALG00000011652	TSN	100	78.603	ENSONIG00000017060	tsn	100	78.603	Oreochromis_niloticus
ENSGALG00000011652	TSN	87	89.447	ENSOANG00000003457	TSN	99	87.317	Ornithorhynchus_anatinus
ENSGALG00000011652	TSN	100	86.463	ENSOCUG00000023529	TSN	100	86.463	Oryctolagus_cuniculus
ENSGALG00000011652	TSN	97	80.543	ENSORLG00000010049	tsn	97	80.543	Oryzias_latipes
ENSGALG00000011652	TSN	97	80.090	ENSORLG00020016476	tsn	97	80.090	Oryzias_latipes_hni
ENSGALG00000011652	TSN	64	73.288	ENSORLG00020017000	-	85	73.288	Oryzias_latipes_hni
ENSGALG00000011652	TSN	97	80.090	ENSORLG00015019192	tsn	97	80.090	Oryzias_latipes_hsok
ENSGALG00000011652	TSN	97	79.638	ENSOMEG00000016335	tsn	97	79.638	Oryzias_melastigma
ENSGALG00000011652	TSN	100	86.463	ENSOGAG00000030436	TSN	100	86.463	Otolemur_garnettii
ENSGALG00000011652	TSN	100	86.026	ENSOARG00000013339	TSN	100	86.026	Ovis_aries
ENSGALG00000011652	TSN	100	86.463	ENSPPAG00000032878	TSN	100	86.463	Pan_paniscus
ENSGALG00000011652	TSN	100	86.026	ENSPPRG00000006531	TSN	99	86.026	Panthera_pardus
ENSGALG00000011652	TSN	80	65.574	ENSPPRG00000004174	-	77	65.574	Panthera_pardus
ENSGALG00000011652	TSN	55	82.677	ENSPTIG00000012953	TSN	88	80.916	Panthera_tigris_altaica
ENSGALG00000011652	TSN	100	86.463	ENSPTRG00000012420	TSN	100	86.463	Pan_troglodytes
ENSGALG00000011652	TSN	100	86.463	ENSPANG00000000733	TSN	100	86.463	Papio_anubis
ENSGALG00000011652	TSN	96	78.182	ENSPKIG00000002005	tsn	97	78.182	Paramormyrops_kingsleyae
ENSGALG00000011652	TSN	77	92.614	ENSPSIG00000006064	TSN	96	92.614	Pelodiscus_sinensis
ENSGALG00000011652	TSN	99	78.761	ENSPMGG00000015287	tsn	99	78.761	Periophthalmus_magnuspinnatus
ENSGALG00000011652	TSN	99	65.368	ENSPMAG00000009161	tsn	99	65.368	Petromyzon_marinus
ENSGALG00000011652	TSN	89	88.725	ENSPCIG00000023491	TSN	99	88.670	Phascolarctos_cinereus
ENSGALG00000011652	TSN	100	78.603	ENSPFOG00000016063	tsn	100	78.603	Poecilia_formosa
ENSGALG00000011652	TSN	100	78.603	ENSPLAG00000010654	tsn	100	78.603	Poecilia_latipinna
ENSGALG00000011652	TSN	100	78.166	ENSPMEG00000023570	tsn	100	78.166	Poecilia_mexicana
ENSGALG00000011652	TSN	100	78.166	ENSPREG00000003481	tsn	100	78.166	Poecilia_reticulata
ENSGALG00000011652	TSN	100	86.463	ENSPPYG00000012774	TSN	100	86.463	Pongo_abelii
ENSGALG00000011652	TSN	74	87.059	ENSPCAG00000003549	TSN	98	87.059	Procavia_capensis
ENSGALG00000011652	TSN	100	86.463	ENSPCOG00000011045	TSN	100	86.463	Propithecus_coquereli
ENSGALG00000011652	TSN	100	86.026	ENSPVAG00000016702	TSN	100	86.026	Pteropus_vampyrus
ENSGALG00000011652	TSN	100	79.039	ENSPNYG00000012396	tsn	85	79.039	Pundamilia_nyererei
ENSGALG00000011652	TSN	100	78.166	ENSPNAG00000018140	tsn	100	78.166	Pygocentrus_nattereri
ENSGALG00000011652	TSN	100	86.463	ENSRNOG00000002319	Tsn	100	86.463	Rattus_norvegicus
ENSGALG00000011652	TSN	100	86.463	ENSRBIG00000041316	TSN	100	86.463	Rhinopithecus_bieti
ENSGALG00000011652	TSN	100	86.463	ENSRROG00000029954	TSN	100	86.463	Rhinopithecus_roxellana
ENSGALG00000011652	TSN	82	70.053	ENSSBOG00000015719	-	90	73.939	Saimiri_boliviensis_boliviensis
ENSGALG00000011652	TSN	100	86.900	ENSSBOG00000028579	TSN	100	86.900	Saimiri_boliviensis_boliviensis
ENSGALG00000011652	TSN	98	87.111	ENSSHAG00000011707	TSN	99	87.111	Sarcophilus_harrisii
ENSGALG00000011652	TSN	96	79.452	ENSSFOG00015020668	tsn	96	79.452	Scleropages_formosus
ENSGALG00000011652	TSN	100	76.419	ENSSMAG00000005822	tsn	100	76.419	Scophthalmus_maximus
ENSGALG00000011652	TSN	100	78.166	ENSSDUG00000011388	tsn	100	78.166	Seriola_dumerili
ENSGALG00000011652	TSN	100	78.166	ENSSLDG00000008206	tsn	100	78.166	Seriola_lalandi_dorsalis
ENSGALG00000011652	TSN	100	56.332	ENSSARG00000007193	-	100	56.332	Sorex_araneus
ENSGALG00000011652	TSN	99	88.053	ENSSPUG00000017518	TSN	99	88.053	Sphenodon_punctatus
ENSGALG00000011652	TSN	97	80.543	ENSSPAG00000009283	tsn	97	80.543	Stegastes_partitus
ENSGALG00000011652	TSN	100	85.590	ENSSSCG00000015729	TSN	100	86.957	Sus_scrofa
ENSGALG00000011652	TSN	100	94.323	ENSTGUG00000004445	TSN	100	94.323	Taeniopygia_guttata
ENSGALG00000011652	TSN	97	76.923	ENSTRUG00000013691	tsn	98	76.923	Takifugu_rubripes
ENSGALG00000011652	TSN	97	79.186	ENSTNIG00000015707	tsn	97	79.186	Tetraodon_nigroviridis
ENSGALG00000011652	TSN	98	85.778	ENSTBEG00000015319	TSN	99	85.778	Tupaia_belangeri
ENSGALG00000011652	TSN	100	86.026	ENSTTRG00000005854	TSN	100	86.026	Tursiops_truncatus
ENSGALG00000011652	TSN	100	86.026	ENSUAMG00000021618	TSN	100	86.026	Ursus_americanus
ENSGALG00000011652	TSN	100	84.716	ENSUMAG00000008516	TSN	100	84.716	Ursus_maritimus
ENSGALG00000011652	TSN	56	67.442	ENSVPAG00000009874	-	100	67.442	Vicugna_pacos
ENSGALG00000011652	TSN	91	87.019	ENSVVUG00000027555	TSN	99	87.440	Vulpes_vulpes
ENSGALG00000011652	TSN	99	78.947	ENSXETG00000000838	tsn	100	78.947	Xenopus_tropicalis
ENSGALG00000011652	TSN	54	72.581	ENSXCOG00000018514	tsn	95	72.581	Xiphophorus_couchianus
ENSGALG00000011652	TSN	100	77.729	ENSXMAG00000022538	tsn	100	77.729	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003697	single-stranded DNA binding	21873635.	IBA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0004521	endoribonuclease activity	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0043565	sequence-specific DNA binding	21873635.	IBA	Function
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	-	IEA	Process