EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000011682 (Gene tree)
Gene ID: 417936
Gene Symbol: CNOT4
Alias: -
Full Name: CCR4-NOT transcription complex subunit 4
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 71062 bases
Position: chr1:47775838-47846899
Accession: 417936
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000066607	RRM_1	PF00076.22	1.1e-05	1	1
ENSGALP00000070405	RRM_1	PF00076.22	1.2e-05	1	1
ENSGALP00000037377	RRM_1	PF00076.22	1.2e-05	1	1
ENSGALP00000069679	RRM_1	PF00076.22	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000108336	-	3370	-	ENSGALP00000070405	713 (aa)	XP_015140283	UPI000739BEEF
ENSGALT00000102864	-	2782	XM_015284791	ENSGALP00000069679	762 (aa)	XP_015140277	UPI00004437B6
ENSGALT00000090791	-	2561	-	ENSGALP00000066607	691 (aa)	-	-
ENSGALT00000038170	-	2571	-	ENSGALP00000037377	856 (aa)	-	Q5ZJC9

Gene Model

Click here to download ENSGALG00000011682's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000011682's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000011682	CNOT4	100	95.372	ENSG00000080802	CNOT4	100	95.372	Homo_sapiens
ENSGALG00000011682	CNOT4	94	89.299	ENSAPOG00000016272	cnot4a	87	89.299	Acanthochromis_polyacanthus
ENSGALG00000011682	CNOT4	94	95.685	ENSAMEG00000012081	CNOT4	92	97.260	Ailuropoda_melanoleuca
ENSGALG00000011682	CNOT4	100	69.297	ENSACIG00000003011	cnot4a	100	69.544	Amphilophus_citrinellus
ENSGALG00000011682	CNOT4	99	89.299	ENSAOCG00000010792	cnot4a	92	89.299	Amphiprion_ocellaris
ENSGALG00000011682	CNOT4	99	89.299	ENSAPEG00000004680	cnot4a	92	89.299	Amphiprion_percula
ENSGALG00000011682	CNOT4	99	88.930	ENSATEG00000017580	cnot4a	92	88.930	Anabas_testudineus
ENSGALG00000011682	CNOT4	100	98.819	ENSAPLG00000016441	CNOT4	100	98.819	Anas_platyrhynchos
ENSGALG00000011682	CNOT4	100	94.882	ENSACAG00000011154	CNOT4	100	94.882	Anolis_carolinensis
ENSGALG00000011682	CNOT4	100	94.951	ENSANAG00000032156	CNOT4	98	98.039	Aotus_nancymaae
ENSGALG00000011682	CNOT4	100	88.321	ENSACLG00000002514	cnot4a	92	88.321	Astatotilapia_calliptera
ENSGALG00000011682	CNOT4	100	70.502	ENSAMXG00000011473	cnot4b	100	70.813	Astyanax_mexicanus
ENSGALG00000011682	CNOT4	100	71.169	ENSAMXG00000001373	cnot4a	100	70.588	Astyanax_mexicanus
ENSGALG00000011682	CNOT4	100	94.811	ENSBTAG00000017919	CNOT4	100	94.811	Bos_taurus
ENSGALG00000011682	CNOT4	100	94.951	ENSCJAG00000012532	CNOT4	99	96.037	Callithrix_jacchus
ENSGALG00000011682	CNOT4	100	94.951	ENSCAFG00000003223	CNOT4	100	94.951	Canis_familiaris
ENSGALG00000011682	CNOT4	100	88.712	ENSCAFG00020000093	CNOT4	94	96.310	Canis_lupus_dingo
ENSGALG00000011682	CNOT4	100	94.951	ENSCHIG00000010955	CNOT4	100	94.951	Capra_hircus
ENSGALG00000011682	CNOT4	100	95.091	ENSTSYG00000000893	CNOT4	100	95.091	Carlito_syrichta
ENSGALG00000011682	CNOT4	100	92.006	ENSCAPG00000006213	CNOT4	100	92.006	Cavia_aperea
ENSGALG00000011682	CNOT4	100	94.390	ENSCPOG00000011526	CNOT4	100	94.390	Cavia_porcellus
ENSGALG00000011682	CNOT4	100	95.372	ENSCCAG00000024414	CNOT4	100	95.372	Cebus_capucinus
ENSGALG00000011682	CNOT4	100	95.372	ENSCATG00000022607	CNOT4	100	95.372	Cercocebus_atys
ENSGALG00000011682	CNOT4	100	94.811	ENSCLAG00000001857	CNOT4	100	94.811	Chinchilla_lanigera
ENSGALG00000011682	CNOT4	100	94.951	ENSCSAG00000009096	CNOT4	100	94.951	Chlorocebus_sabaeus
ENSGALG00000011682	CNOT4	68	99.465	ENSCHOG00000010412	CNOT4	65	99.465	Choloepus_hoffmanni
ENSGALG00000011682	CNOT4	100	97.335	ENSCPBG00000004959	CNOT4	100	97.335	Chrysemys_picta_bellii
ENSGALG00000011682	CNOT4	100	95.231	ENSCANG00000029319	CNOT4	100	95.231	Colobus_angolensis_palliatus
ENSGALG00000011682	CNOT4	100	94.390	ENSCGRG00001014651	Cnot4	100	94.390	Cricetulus_griseus_chok1gshd
ENSGALG00000011682	CNOT4	100	94.390	ENSCGRG00000005727	Cnot4	100	94.390	Cricetulus_griseus_crigri
ENSGALG00000011682	CNOT4	95	89.299	ENSCSEG00000015080	cnot4a	88	89.299	Cynoglossus_semilaevis
ENSGALG00000011682	CNOT4	100	88.321	ENSCVAG00000009399	cnot4a	100	70.170	Cyprinodon_variegatus
ENSGALG00000011682	CNOT4	100	70.698	ENSDARG00000007045	cnot4a	100	70.911	Danio_rerio
ENSGALG00000011682	CNOT4	100	71.411	ENSDARG00000007639	cnot4b	100	71.411	Danio_rerio
ENSGALG00000011682	CNOT4	100	94.951	ENSDNOG00000009409	CNOT4	100	94.951	Dasypus_novemcinctus
ENSGALG00000011682	CNOT4	100	94.250	ENSDORG00000012268	Cnot4	100	94.250	Dipodomys_ordii
ENSGALG00000011682	CNOT4	100	89.902	ENSETEG00000013407	CNOT4	94	89.902	Echinops_telfairi
ENSGALG00000011682	CNOT4	100	89.720	ENSEASG00005014430	CNOT4	94	96.125	Equus_asinus_asinus
ENSGALG00000011682	CNOT4	100	94.670	ENSECAG00000020262	CNOT4	100	94.670	Equus_caballus
ENSGALG00000011682	CNOT4	99	90.637	ENSELUG00000008742	cnot4a	90	90.637	Esox_lucius
ENSGALG00000011682	CNOT4	98	86.397	ENSELUG00000011540	cnot4b	100	66.010	Esox_lucius
ENSGALG00000011682	CNOT4	100	94.811	ENSFCAG00000011904	CNOT4	100	94.811	Felis_catus
ENSGALG00000011682	CNOT4	100	98.950	ENSFALG00000011194	CNOT4	100	98.950	Ficedula_albicollis
ENSGALG00000011682	CNOT4	100	94.530	ENSFDAG00000013525	CNOT4	100	94.530	Fukomys_damarensis
ENSGALG00000011682	CNOT4	100	88.321	ENSFHEG00000006608	cnot4a	100	69.252	Fundulus_heteroclitus
ENSGALG00000011682	CNOT4	95	65.269	ENSGMOG00000001329	cnot4a	99	65.769	Gadus_morhua
ENSGALG00000011682	CNOT4	100	70.950	ENSGACG00000004276	cnot4a	100	71.218	Gasterosteus_aculeatus
ENSGALG00000011682	CNOT4	100	97.118	ENSGAGG00000017331	CNOT4	100	97.118	Gopherus_agassizii
ENSGALG00000011682	CNOT4	96	91.185	ENSGGOG00000000142	CNOT4	97	97.238	Gorilla_gorilla
ENSGALG00000011682	CNOT4	100	88.321	ENSHBUG00000000027	cnot4a	92	88.321	Haplochromis_burtoni
ENSGALG00000011682	CNOT4	100	94.530	ENSHGLG00000011533	CNOT4	100	94.530	Heterocephalus_glaber_female
ENSGALG00000011682	CNOT4	86	88.007	ENSHGLG00100013058	CNOT4	94	96.310	Heterocephalus_glaber_male
ENSGALG00000011682	CNOT4	99	87.226	ENSHCOG00000015815	cnot4a	92	87.226	Hippocampus_comes
ENSGALG00000011682	CNOT4	100	68.083	ENSIPUG00000016994	cnot4b	100	68.987	Ictalurus_punctatus
ENSGALG00000011682	CNOT4	100	68.364	ENSIPUG00000006393	cnot4	100	71.429	Ictalurus_punctatus
ENSGALG00000011682	CNOT4	100	94.670	ENSSTOG00000007717	CNOT4	100	94.670	Ictidomys_tridecemlineatus
ENSGALG00000011682	CNOT4	86	72.466	ENSJJAG00000019991	-	94	78.967	Jaculus_jaculus
ENSGALG00000011682	CNOT4	100	94.530	ENSJJAG00000016618	Cnot4	100	94.530	Jaculus_jaculus
ENSGALG00000011682	CNOT4	94	89.299	ENSKMAG00000004581	cnot4a	84	89.299	Kryptolebias_marmoratus
ENSGALG00000011682	CNOT4	99	89.668	ENSLBEG00000009999	cnot4a	92	88.686	Labrus_bergylta
ENSGALG00000011682	CNOT4	100	90.909	ENSLACG00000002647	CNOT4	99	90.909	Latimeria_chalumnae
ENSGALG00000011682	CNOT4	100	82.504	ENSLOCG00000016126	cnot4a	100	82.194	Lepisosteus_oculatus
ENSGALG00000011682	CNOT4	100	94.670	ENSLAFG00000000709	CNOT4	100	94.670	Loxodonta_africana
ENSGALG00000011682	CNOT4	100	94.951	ENSMFAG00000046349	CNOT4	99	96.037	Macaca_fascicularis
ENSGALG00000011682	CNOT4	100	95.372	ENSMMUG00000016181	CNOT4	100	95.372	Macaca_mulatta
ENSGALG00000011682	CNOT4	100	95.372	ENSMNEG00000042164	CNOT4	100	95.372	Macaca_nemestrina
ENSGALG00000011682	CNOT4	100	95.372	ENSMLEG00000032709	CNOT4	100	95.372	Mandrillus_leucophaeus
ENSGALG00000011682	CNOT4	99	89.299	ENSMAMG00000023194	cnot4a	92	89.299	Mastacembelus_armatus
ENSGALG00000011682	CNOT4	100	88.321	ENSMZEG00005007312	cnot4a	92	88.321	Maylandia_zebra
ENSGALG00000011682	CNOT4	100	99.475	ENSMGAG00000011788	CNOT4	100	99.475	Meleagris_gallopavo
ENSGALG00000011682	CNOT4	100	94.390	ENSMAUG00000020415	Cnot4	100	94.390	Mesocricetus_auratus
ENSGALG00000011682	CNOT4	100	95.652	ENSMICG00000001667	CNOT4	100	97.183	Microcebus_murinus
ENSGALG00000011682	CNOT4	100	94.109	ENSMOCG00000020955	Cnot4	100	94.109	Microtus_ochrogaster
ENSGALG00000011682	CNOT4	95	74.479	ENSMMOG00000014565	cnot4a	99	74.479	Mola_mola
ENSGALG00000011682	CNOT4	100	96.494	ENSMODG00000014068	CNOT4	100	96.494	Monodelphis_domestica
ENSGALG00000011682	CNOT4	93	89.299	ENSMALG00000011662	cnot4a	81	89.299	Monopterus_albus
ENSGALG00000011682	CNOT4	100	93.706	MGP_CAROLIEiJ_G0028217	Cnot4	100	93.706	Mus_caroli
ENSGALG00000011682	CNOT4	100	93.969	ENSMUSG00000038784	Cnot4	100	93.969	Mus_musculus
ENSGALG00000011682	CNOT4	100	93.829	MGP_PahariEiJ_G0021974	Cnot4	100	93.829	Mus_pahari
ENSGALG00000011682	CNOT4	100	93.829	MGP_SPRETEiJ_G0029216	Cnot4	100	93.829	Mus_spretus
ENSGALG00000011682	CNOT4	100	94.951	ENSMPUG00000004089	CNOT4	100	94.951	Mustela_putorius_furo
ENSGALG00000011682	CNOT4	100	88.712	ENSMLUG00000008260	CNOT4	100	88.712	Myotis_lucifugus
ENSGALG00000011682	CNOT4	100	94.250	ENSNGAG00000015030	Cnot4	100	94.250	Nannospalax_galili
ENSGALG00000011682	CNOT4	100	66.667	ENSNBRG00000021144	cnot4a	100	67.273	Neolamprologus_brichardi
ENSGALG00000011682	CNOT4	100	95.091	ENSNLEG00000013352	CNOT4	100	95.091	Nomascus_leucogenys
ENSGALG00000011682	CNOT4	80	92.348	ENSOPRG00000001023	CNOT4	82	91.940	Ochotona_princeps
ENSGALG00000011682	CNOT4	100	94.390	ENSODEG00000012975	CNOT4	100	94.390	Octodon_degus
ENSGALG00000011682	CNOT4	100	88.321	ENSONIG00000008656	cnot4a	92	88.321	Oreochromis_niloticus
ENSGALG00000011682	CNOT4	100	95.245	ENSOANG00000005006	CNOT4	100	95.245	Ornithorhynchus_anatinus
ENSGALG00000011682	CNOT4	100	95.091	ENSOCUG00000013448	CNOT4	100	95.091	Oryctolagus_cuniculus
ENSGALG00000011682	CNOT4	100	69.372	ENSORLG00000003727	cnot4a	100	68.892	Oryzias_latipes
ENSGALG00000011682	CNOT4	100	69.753	ENSORLG00020015684	cnot4a	100	69.145	Oryzias_latipes_hni
ENSGALG00000011682	CNOT4	100	69.372	ENSORLG00015008470	cnot4a	100	68.842	Oryzias_latipes_hsok
ENSGALG00000011682	CNOT4	100	68.960	ENSOMEG00000011084	cnot4a	100	68.512	Oryzias_melastigma
ENSGALG00000011682	CNOT4	100	95.652	ENSOGAG00000015499	CNOT4	100	95.652	Otolemur_garnettii
ENSGALG00000011682	CNOT4	100	95.091	ENSOARG00000008803	CNOT4	100	95.091	Ovis_aries
ENSGALG00000011682	CNOT4	100	95.091	ENSPPAG00000041937	CNOT4	99	96.270	Pan_paniscus
ENSGALG00000011682	CNOT4	100	95.231	ENSPPRG00000023940	CNOT4	100	95.231	Panthera_pardus
ENSGALG00000011682	CNOT4	100	94.670	ENSPTIG00000016601	CNOT4	100	94.670	Panthera_tigris_altaica
ENSGALG00000011682	CNOT4	100	95.231	ENSPTRG00000019727	CNOT4	100	95.231	Pan_troglodytes
ENSGALG00000011682	CNOT4	100	95.231	ENSPANG00000017724	CNOT4	100	95.231	Papio_anubis
ENSGALG00000011682	CNOT4	100	69.484	ENSPKIG00000018137	cnot4a	100	69.504	Paramormyrops_kingsleyae
ENSGALG00000011682	CNOT4	100	96.330	ENSPSIG00000011256	CNOT4	100	96.330	Pelodiscus_sinensis
ENSGALG00000011682	CNOT4	100	68.022	ENSPMGG00000005671	cnot4a	100	68.022	Periophthalmus_magnuspinnatus
ENSGALG00000011682	CNOT4	100	94.250	ENSPEMG00000021566	Cnot4	100	94.250	Peromyscus_maniculatus_bairdii
ENSGALG00000011682	CNOT4	100	96.213	ENSPCIG00000029622	CNOT4	96	96.213	Phascolarctos_cinereus
ENSGALG00000011682	CNOT4	100	68.997	ENSPFOG00000002228	cnot4a	100	68.949	Poecilia_formosa
ENSGALG00000011682	CNOT4	100	69.155	ENSPLAG00000001780	cnot4a	100	69.155	Poecilia_latipinna
ENSGALG00000011682	CNOT4	100	69.155	ENSPMEG00000006852	cnot4a	100	69.155	Poecilia_mexicana
ENSGALG00000011682	CNOT4	100	71.390	ENSPREG00000008171	cnot4a	100	71.658	Poecilia_reticulata
ENSGALG00000011682	CNOT4	100	94.670	ENSPPYG00000018026	CNOT4	100	94.670	Pongo_abelii
ENSGALG00000011682	CNOT4	100	95.372	ENSPCOG00000019907	CNOT4	100	97.183	Propithecus_coquereli
ENSGALG00000011682	CNOT4	94	93.601	ENSPVAG00000004905	CNOT4	90	93.333	Pteropus_vampyrus
ENSGALG00000011682	CNOT4	100	88.321	ENSPNYG00000004276	cnot4a	92	88.321	Pundamilia_nyererei
ENSGALG00000011682	CNOT4	99	91.882	ENSPNAG00000020433	cnot4a	91	91.882	Pygocentrus_nattereri
ENSGALG00000011682	CNOT4	100	72.283	ENSPNAG00000008679	cnot4b	100	73.039	Pygocentrus_nattereri
ENSGALG00000011682	CNOT4	100	93.689	ENSRNOG00000010795	Cnot4	100	93.689	Rattus_norvegicus
ENSGALG00000011682	CNOT4	100	95.372	ENSRBIG00000043977	CNOT4	100	95.372	Rhinopithecus_bieti
ENSGALG00000011682	CNOT4	100	94.670	ENSSBOG00000020808	CNOT4	99	96.037	Saimiri_boliviensis_boliviensis
ENSGALG00000011682	CNOT4	100	96.353	ENSSHAG00000013639	CNOT4	100	96.353	Sarcophilus_harrisii
ENSGALG00000011682	CNOT4	99	92.251	ENSSFOG00015017285	CNOT4	91	92.251	Scleropages_formosus
ENSGALG00000011682	CNOT4	99	90.406	ENSSFOG00015002019	cnot4a	91	90.406	Scleropages_formosus
ENSGALG00000011682	CNOT4	99	89.299	ENSSMAG00000008614	cnot4a	92	89.299	Scophthalmus_maximus
ENSGALG00000011682	CNOT4	99	89.299	ENSSDUG00000022635	cnot4a	92	89.299	Seriola_dumerili
ENSGALG00000011682	CNOT4	100	66.143	ENSSDUG00000018585	cnot4b	100	66.429	Seriola_dumerili
ENSGALG00000011682	CNOT4	99	89.299	ENSSLDG00000015770	cnot4a	92	89.299	Seriola_lalandi_dorsalis
ENSGALG00000011682	CNOT4	100	60.784	ENSSLDG00000014347	cnot4b	100	60.224	Seriola_lalandi_dorsalis
ENSGALG00000011682	CNOT4	100	89.725	ENSSPUG00000004677	CNOT4	100	89.725	Sphenodon_punctatus
ENSGALG00000011682	CNOT4	99	89.299	ENSSPAG00000012329	cnot4a	92	89.299	Stegastes_partitus
ENSGALG00000011682	CNOT4	100	95.372	ENSSSCG00000021354	CNOT4	100	95.372	Sus_scrofa
ENSGALG00000011682	CNOT4	100	99.081	ENSTGUG00000009161	CNOT4	100	99.081	Taeniopygia_guttata
ENSGALG00000011682	CNOT4	100	69.538	ENSTRUG00000016861	cnot4a	100	69.345	Takifugu_rubripes
ENSGALG00000011682	CNOT4	100	70.596	ENSTNIG00000016000	cnot4a	100	70.867	Tetraodon_nigroviridis
ENSGALG00000011682	CNOT4	94	89.732	ENSTBEG00000002202	CNOT4	88	90.525	Tupaia_belangeri
ENSGALG00000011682	CNOT4	94	94.799	ENSTTRG00000005122	CNOT4	90	94.501	Tursiops_truncatus
ENSGALG00000011682	CNOT4	100	88.857	ENSUAMG00000026759	CNOT4	94	96.863	Ursus_americanus
ENSGALG00000011682	CNOT4	99	95.480	ENSUMAG00000015351	CNOT4	94	96.863	Ursus_maritimus
ENSGALG00000011682	CNOT4	100	95.372	ENSVVUG00000006200	CNOT4	100	95.372	Vulpes_vulpes
ENSGALG00000011682	CNOT4	97	98.909	ENSXETG00000010594	cnot4	90	98.909	Xenopus_tropicalis
ENSGALG00000011682	CNOT4	86	70.928	ENSXCOG00000020824	cnot4a	98	71.233	Xiphophorus_couchianus
ENSGALG00000011682	CNOT4	100	70.981	ENSXMAG00000016984	cnot4a	100	71.935	Xiphophorus_maculatus