EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000011685 (Gene tree)
Gene ID: 421595
Gene Symbol: CSTF3
Alias: -
Full Name: Gallus gallus cleavage stimulation factor subunit 3 (CSTF3)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 43598 bases
Position: chr5:7254514-7298111
Accession: NM_001012568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000019081	Suf	PF05843.14	2.9e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000019104	-	2811	-	ENSGALP00000019081	718 (aa)	-	Q5F4A0

Gene Model

Click here to download ENSGALG00000011685's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000011685's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000011685	CSTF3	100	98.050	ENSG00000176102	CSTF3	100	98.050	Homo_sapiens
ENSGALG00000011685	CSTF3	100	91.086	ENSAPOG00000014054	cstf3	100	91.086	Acanthochromis_polyacanthus
ENSGALG00000011685	CSTF3	99	98.590	ENSAMEG00000007187	CSTF3	98	98.590	Ailuropoda_melanoleuca
ENSGALG00000011685	CSTF3	87	85.920	ENSACIG00000005539	cstf3	100	85.920	Amphilophus_citrinellus
ENSGALG00000011685	CSTF3	100	90.947	ENSAOCG00000010930	cstf3	100	90.947	Amphiprion_ocellaris
ENSGALG00000011685	CSTF3	100	90.947	ENSAPEG00000007903	cstf3	100	90.947	Amphiprion_percula
ENSGALG00000011685	CSTF3	100	91.226	ENSATEG00000000190	cstf3	100	91.226	Anabas_testudineus
ENSGALG00000011685	CSTF3	99	99.294	ENSAPLG00000007217	CSTF3	100	99.294	Anas_platyrhynchos
ENSGALG00000011685	CSTF3	100	96.379	ENSACAG00000002823	CSTF3	100	96.379	Anolis_carolinensis
ENSGALG00000011685	CSTF3	100	98.050	ENSANAG00000020699	CSTF3	100	98.240	Aotus_nancymaae
ENSGALG00000011685	CSTF3	98	91.631	ENSACLG00000007820	cstf3	100	90.808	Astatotilapia_calliptera
ENSGALG00000011685	CSTF3	100	90.264	ENSAMXG00000014198	cstf3	100	90.542	Astyanax_mexicanus
ENSGALG00000011685	CSTF3	100	98.050	ENSBTAG00000008617	CSTF3	100	98.368	Bos_taurus
ENSGALG00000011685	CSTF3	97	49.178	WBGene00006307	suf-1	99	49.178	Caenorhabditis_elegans
ENSGALG00000011685	CSTF3	100	98.050	ENSCJAG00000005533	CSTF3	100	98.240	Callithrix_jacchus
ENSGALG00000011685	CSTF3	100	97.911	ENSCAFG00000007264	CSTF3	100	97.911	Canis_familiaris
ENSGALG00000011685	CSTF3	99	98.449	ENSCAFG00020002715	CSTF3	99	98.449	Canis_lupus_dingo
ENSGALG00000011685	CSTF3	98	96.871	ENSCHIG00000016418	CSTF3	100	98.240	Capra_hircus
ENSGALG00000011685	CSTF3	99	98.166	ENSTSYG00000000451	CSTF3	99	100.000	Carlito_syrichta
ENSGALG00000011685	CSTF3	83	91.943	ENSCAPG00000010958	CSTF3	98	91.943	Cavia_aperea
ENSGALG00000011685	CSTF3	100	97.772	ENSCPOG00000005545	CSTF3	100	97.896	Cavia_porcellus
ENSGALG00000011685	CSTF3	100	98.050	ENSCCAG00000024790	CSTF3	100	98.240	Cebus_capucinus
ENSGALG00000011685	CSTF3	100	98.050	ENSCATG00000007080	CSTF3	100	98.240	Cercocebus_atys
ENSGALG00000011685	CSTF3	100	98.050	ENSCLAG00000016179	CSTF3	100	98.050	Chinchilla_lanigera
ENSGALG00000011685	CSTF3	78	100.000	ENSCHOG00000002497	CSTF3	79	100.000	Choloepus_hoffmanni
ENSGALG00000011685	CSTF3	100	98.189	ENSCPBG00000006753	CSTF3	100	98.189	Chrysemys_picta_bellii
ENSGALG00000011685	CSTF3	98	62.378	ENSCING00000006401	-	98	62.378	Ciona_intestinalis
ENSGALG00000011685	CSTF3	98	62.064	ENSCSAVG00000004851	-	100	62.064	Ciona_savignyi
ENSGALG00000011685	CSTF3	100	98.050	ENSCANG00000035468	CSTF3	100	98.240	Colobus_angolensis_palliatus
ENSGALG00000011685	CSTF3	100	97.354	ENSCGRG00001014773	Cstf3	100	97.354	Cricetulus_griseus_chok1gshd
ENSGALG00000011685	CSTF3	100	97.354	ENSCGRG00000004142	Cstf3	100	97.354	Cricetulus_griseus_crigri
ENSGALG00000011685	CSTF3	100	90.808	ENSCSEG00000014283	cstf3	100	90.808	Cynoglossus_semilaevis
ENSGALG00000011685	CSTF3	100	90.111	ENSCVAG00000019739	cstf3	100	90.111	Cyprinodon_variegatus
ENSGALG00000011685	CSTF3	99	91.972	ENSDARG00000018904	cstf3	99	91.972	Danio_rerio
ENSGALG00000011685	CSTF3	99	97.756	ENSDNOG00000007366	CSTF3	99	97.756	Dasypus_novemcinctus
ENSGALG00000011685	CSTF3	99	90.550	ENSDORG00000005898	Cstf3	99	90.550	Dipodomys_ordii
ENSGALG00000011685	CSTF3	98	57.320	FBgn0003559	su(f)	98	57.320	Drosophila_melanogaster
ENSGALG00000011685	CSTF3	89	92.523	ENSETEG00000017097	CSTF3	90	92.523	Echinops_telfairi
ENSGALG00000011685	CSTF3	84	74.050	ENSEBUG00000015459	cstf3	96	74.050	Eptatretus_burgeri
ENSGALG00000011685	CSTF3	99	96.897	ENSEASG00005019884	CSTF3	100	98.286	Equus_asinus_asinus
ENSGALG00000011685	CSTF3	99	96.897	ENSECAG00000023338	CSTF3	100	98.286	Equus_caballus
ENSGALG00000011685	CSTF3	100	92.479	ENSEEUG00000015167	CSTF3	100	92.479	Erinaceus_europaeus
ENSGALG00000011685	CSTF3	100	89.694	ENSELUG00000023393	cstf3	100	89.694	Esox_lucius
ENSGALG00000011685	CSTF3	100	97.911	ENSFCAG00000030711	CSTF3	100	97.911	Felis_catus
ENSGALG00000011685	CSTF3	93	99.399	ENSFALG00000010764	CSTF3	100	98.464	Ficedula_albicollis
ENSGALG00000011685	CSTF3	100	98.050	ENSFDAG00000012082	CSTF3	100	98.050	Fukomys_damarensis
ENSGALG00000011685	CSTF3	100	90.251	ENSFHEG00000020623	cstf3	100	90.251	Fundulus_heteroclitus
ENSGALG00000011685	CSTF3	100	89.430	ENSGMOG00000012275	cstf3	100	89.430	Gadus_morhua
ENSGALG00000011685	CSTF3	100	90.529	ENSGAFG00000002181	cstf3	100	90.529	Gambusia_affinis
ENSGALG00000011685	CSTF3	100	90.251	ENSGACG00000015997	cstf3	100	90.251	Gasterosteus_aculeatus
ENSGALG00000011685	CSTF3	100	97.911	ENSGAGG00000006200	CSTF3	100	97.911	Gopherus_agassizii
ENSGALG00000011685	CSTF3	99	92.525	ENSGGOG00000026591	CSTF3	99	92.525	Gorilla_gorilla
ENSGALG00000011685	CSTF3	98	91.631	ENSHBUG00000016656	cstf3	100	90.808	Haplochromis_burtoni
ENSGALG00000011685	CSTF3	100	97.772	ENSHGLG00000017834	CSTF3	100	97.772	Heterocephalus_glaber_female
ENSGALG00000011685	CSTF3	100	97.772	ENSHGLG00100018042	CSTF3	100	97.772	Heterocephalus_glaber_male
ENSGALG00000011685	CSTF3	100	88.162	ENSHCOG00000015218	cstf3	100	88.162	Hippocampus_comes
ENSGALG00000011685	CSTF3	99	90.678	ENSIPUG00000013170	CSTF3	99	90.678	Ictalurus_punctatus
ENSGALG00000011685	CSTF3	100	98.050	ENSSTOG00000013306	CSTF3	100	98.050	Ictidomys_tridecemlineatus
ENSGALG00000011685	CSTF3	99	86.115	ENSJJAG00000018430	Cstf3	99	86.115	Jaculus_jaculus
ENSGALG00000011685	CSTF3	100	89.415	ENSKMAG00000010916	cstf3	100	89.415	Kryptolebias_marmoratus
ENSGALG00000011685	CSTF3	100	89.833	ENSLBEG00000002306	cstf3	100	89.833	Labrus_bergylta
ENSGALG00000011685	CSTF3	100	93.733	ENSLACG00000017296	CSTF3	100	93.733	Latimeria_chalumnae
ENSGALG00000011685	CSTF3	100	93.315	ENSLOCG00000004415	cstf3	100	93.315	Lepisosteus_oculatus
ENSGALG00000011685	CSTF3	100	97.911	ENSLAFG00000008712	CSTF3	100	97.911	Loxodonta_africana
ENSGALG00000011685	CSTF3	100	98.050	ENSMFAG00000029516	CSTF3	100	98.240	Macaca_fascicularis
ENSGALG00000011685	CSTF3	100	98.050	ENSMMUG00000002542	CSTF3	100	98.050	Macaca_mulatta
ENSGALG00000011685	CSTF3	100	98.050	ENSMNEG00000021807	CSTF3	100	98.240	Macaca_nemestrina
ENSGALG00000011685	CSTF3	100	98.050	ENSMLEG00000039594	CSTF3	100	98.240	Mandrillus_leucophaeus
ENSGALG00000011685	CSTF3	100	90.947	ENSMAMG00000020423	cstf3	100	90.947	Mastacembelus_armatus
ENSGALG00000011685	CSTF3	98	91.631	ENSMZEG00005012082	cstf3	100	90.808	Maylandia_zebra
ENSGALG00000011685	CSTF3	100	99.861	ENSMGAG00000001383	CSTF3	100	99.861	Meleagris_gallopavo
ENSGALG00000011685	CSTF3	100	97.214	ENSMAUG00000002487	Cstf3	100	97.214	Mesocricetus_auratus
ENSGALG00000011685	CSTF3	100	98.050	ENSMICG00000004784	CSTF3	100	98.240	Microcebus_murinus
ENSGALG00000011685	CSTF3	100	97.354	ENSMOCG00000017583	Cstf3	100	97.354	Microtus_ochrogaster
ENSGALG00000011685	CSTF3	99	91.127	ENSMMOG00000016026	cstf3	95	91.127	Mola_mola
ENSGALG00000011685	CSTF3	100	97.354	ENSMODG00000009745	-	100	97.354	Monodelphis_domestica
ENSGALG00000011685	CSTF3	99	83.754	ENSMODG00000025205	-	99	83.754	Monodelphis_domestica
ENSGALG00000011685	CSTF3	100	90.669	ENSMALG00000012050	cstf3	100	90.669	Monopterus_albus
ENSGALG00000011685	CSTF3	100	97.354	MGP_CAROLIEiJ_G0024026	Cstf3	100	97.354	Mus_caroli
ENSGALG00000011685	CSTF3	100	97.354	ENSMUSG00000027176	Cstf3	100	97.354	Mus_musculus
ENSGALG00000011685	CSTF3	100	97.354	MGP_PahariEiJ_G0025464	Cstf3	100	97.354	Mus_pahari
ENSGALG00000011685	CSTF3	100	97.354	MGP_SPRETEiJ_G0024939	Cstf3	100	97.354	Mus_spretus
ENSGALG00000011685	CSTF3	100	98.050	ENSMPUG00000011457	CSTF3	100	98.050	Mustela_putorius_furo
ENSGALG00000011685	CSTF3	100	94.986	ENSMLUG00000026022	-	100	94.986	Myotis_lucifugus
ENSGALG00000011685	CSTF3	99	98.172	ENSMLUG00000003073	-	99	98.172	Myotis_lucifugus
ENSGALG00000011685	CSTF3	100	97.354	ENSNGAG00000010677	Cstf3	100	97.354	Nannospalax_galili
ENSGALG00000011685	CSTF3	87	90.880	ENSNBRG00000007345	cstf3	100	90.880	Neolamprologus_brichardi
ENSGALG00000011685	CSTF3	100	98.050	ENSNLEG00000017901	CSTF3	100	98.240	Nomascus_leucogenys
ENSGALG00000011685	CSTF3	73	95.029	ENSMEUG00000005640	-	100	95.029	Notamacropus_eugenii
ENSGALG00000011685	CSTF3	67	93.421	ENSOPRG00000000199	-	67	93.421	Ochotona_princeps
ENSGALG00000011685	CSTF3	89	85.692	ENSODEG00000006311	-	97	85.692	Octodon_degus
ENSGALG00000011685	CSTF3	100	97.911	ENSODEG00000016737	-	100	97.911	Octodon_degus
ENSGALG00000011685	CSTF3	98	91.631	ENSONIG00000005563	cstf3	100	90.808	Oreochromis_niloticus
ENSGALG00000011685	CSTF3	90	97.077	ENSOANG00000015140	CSTF3	100	97.077	Ornithorhynchus_anatinus
ENSGALG00000011685	CSTF3	100	97.911	ENSOCUG00000015417	CSTF3	100	97.911	Oryctolagus_cuniculus
ENSGALG00000011685	CSTF3	100	90.251	ENSORLG00000009762	cstf3	100	90.251	Oryzias_latipes
ENSGALG00000011685	CSTF3	100	90.251	ENSORLG00020005540	cstf3	100	90.251	Oryzias_latipes_hni
ENSGALG00000011685	CSTF3	100	90.111	ENSORLG00015003551	cstf3	100	90.111	Oryzias_latipes_hsok
ENSGALG00000011685	CSTF3	100	89.694	ENSOMEG00000003848	cstf3	100	89.694	Oryzias_melastigma
ENSGALG00000011685	CSTF3	100	97.642	ENSOGAG00000010229	CSTF3	100	97.642	Otolemur_garnettii
ENSGALG00000011685	CSTF3	90	98.134	ENSOARG00000017271	CSTF3	99	98.134	Ovis_aries
ENSGALG00000011685	CSTF3	99	94.922	ENSPPAG00000027358	CSTF3	99	94.922	Pan_paniscus
ENSGALG00000011685	CSTF3	100	97.911	ENSPPRG00000016852	CSTF3	100	97.911	Panthera_pardus
ENSGALG00000011685	CSTF3	100	97.911	ENSPTIG00000008716	CSTF3	100	97.911	Panthera_tigris_altaica
ENSGALG00000011685	CSTF3	100	98.050	ENSPTRG00000003485	CSTF3	100	98.050	Pan_troglodytes
ENSGALG00000011685	CSTF3	100	98.050	ENSPANG00000013722	CSTF3	100	98.050	Papio_anubis
ENSGALG00000011685	CSTF3	100	92.061	ENSPKIG00000023648	cstf3	100	92.061	Paramormyrops_kingsleyae
ENSGALG00000011685	CSTF3	100	97.772	ENSPSIG00000009173	CSTF3	100	97.772	Pelodiscus_sinensis
ENSGALG00000011685	CSTF3	76	94.526	ENSPMGG00000000164	cstf3	99	94.526	Periophthalmus_magnuspinnatus
ENSGALG00000011685	CSTF3	100	97.214	ENSPEMG00000011481	Cstf3	100	97.214	Peromyscus_maniculatus_bairdii
ENSGALG00000011685	CSTF3	99	80.337	ENSPMAG00000007282	cstf3	100	79.750	Petromyzon_marinus
ENSGALG00000011685	CSTF3	100	80.668	ENSPCIG00000030419	-	90	81.085	Phascolarctos_cinereus
ENSGALG00000011685	CSTF3	99	95.205	ENSPCIG00000026406	-	100	97.280	Phascolarctos_cinereus
ENSGALG00000011685	CSTF3	100	90.669	ENSPFOG00000017239	cstf3	100	90.669	Poecilia_formosa
ENSGALG00000011685	CSTF3	100	90.669	ENSPLAG00000009456	cstf3	100	90.669	Poecilia_latipinna
ENSGALG00000011685	CSTF3	100	90.669	ENSPMEG00000010320	cstf3	100	90.669	Poecilia_mexicana
ENSGALG00000011685	CSTF3	100	90.669	ENSPREG00000013549	cstf3	100	90.669	Poecilia_reticulata
ENSGALG00000011685	CSTF3	100	98.050	ENSPPYG00000003375	CSTF3	100	98.050	Pongo_abelii
ENSGALG00000011685	CSTF3	71	100.000	ENSPCAG00000008025	-	71	100.000	Procavia_capensis
ENSGALG00000011685	CSTF3	100	92.897	ENSPCOG00000014417	CSTF3	100	92.897	Propithecus_coquereli
ENSGALG00000011685	CSTF3	100	92.618	ENSPVAG00000002350	CSTF3	100	92.618	Pteropus_vampyrus
ENSGALG00000011685	CSTF3	98	91.631	ENSPNYG00000018259	cstf3	100	90.808	Pundamilia_nyererei
ENSGALG00000011685	CSTF3	100	91.783	ENSPNAG00000020182	cstf3	100	91.783	Pygocentrus_nattereri
ENSGALG00000011685	CSTF3	87	97.440	ENSRNOG00000012089	Cstf3	100	97.440	Rattus_norvegicus
ENSGALG00000011685	CSTF3	99	97.038	ENSRBIG00000044258	CSTF3	100	98.240	Rhinopithecus_bieti
ENSGALG00000011685	CSTF3	100	98.050	ENSRROG00000043450	CSTF3	100	98.240	Rhinopithecus_roxellana
ENSGALG00000011685	CSTF3	100	98.050	ENSSBOG00000024764	CSTF3	100	98.240	Saimiri_boliviensis_boliviensis
ENSGALG00000011685	CSTF3	99	96.788	ENSSHAG00000018128	-	99	96.788	Sarcophilus_harrisii
ENSGALG00000011685	CSTF3	100	84.958	ENSSHAG00000003135	-	99	84.958	Sarcophilus_harrisii
ENSGALG00000011685	CSTF3	100	92.479	ENSSFOG00015022133	cstf3	100	92.479	Scleropages_formosus
ENSGALG00000011685	CSTF3	100	90.251	ENSSMAG00000002197	cstf3	100	90.251	Scophthalmus_maximus
ENSGALG00000011685	CSTF3	100	91.086	ENSSDUG00000020426	cstf3	100	91.086	Seriola_dumerili
ENSGALG00000011685	CSTF3	100	91.086	ENSSLDG00000025649	cstf3	100	91.086	Seriola_lalandi_dorsalis
ENSGALG00000011685	CSTF3	100	97.911	ENSSARG00000000391	CSTF3	100	97.911	Sorex_araneus
ENSGALG00000011685	CSTF3	96	97.974	ENSSPUG00000010546	CSTF3	100	97.974	Sphenodon_punctatus
ENSGALG00000011685	CSTF3	100	90.947	ENSSPAG00000004958	cstf3	100	90.947	Stegastes_partitus
ENSGALG00000011685	CSTF3	99	97.896	ENSSSCG00000040954	CSTF3	99	97.896	Sus_scrofa
ENSGALG00000011685	CSTF3	99	99.153	ENSTGUG00000005010	CSTF3	100	99.153	Taeniopygia_guttata
ENSGALG00000011685	CSTF3	100	89.276	ENSTRUG00000004959	cstf3	100	89.276	Takifugu_rubripes
ENSGALG00000011685	CSTF3	99	90.563	ENSTNIG00000013811	cstf3	99	90.563	Tetraodon_nigroviridis
ENSGALG00000011685	CSTF3	89	95.016	ENSTBEG00000001544	CSTF3	90	95.016	Tupaia_belangeri
ENSGALG00000011685	CSTF3	100	95.265	ENSTTRG00000016366	CSTF3	100	95.265	Tursiops_truncatus
ENSGALG00000011685	CSTF3	99	98.449	ENSUMAG00000018971	CSTF3	100	98.240	Ursus_maritimus
ENSGALG00000011685	CSTF3	100	97.911	ENSVPAG00000007800	CSTF3	100	97.911	Vicugna_pacos
ENSGALG00000011685	CSTF3	99	98.449	ENSVVUG00000014938	CSTF3	100	98.240	Vulpes_vulpes
ENSGALG00000011685	CSTF3	88	79.844	ENSXETG00000021399	cstf3	100	81.068	Xenopus_tropicalis
ENSGALG00000011685	CSTF3	66	43.595	ENSXETG00000017946	-	99	43.595	Xenopus_tropicalis
ENSGALG00000011685	CSTF3	87	90.400	ENSXCOG00000011741	cstf3	100	90.400	Xiphophorus_couchianus
ENSGALG00000011685	CSTF3	100	90.669	ENSXMAG00000009545	cstf3	100	90.669	Xiphophorus_maculatus