EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000011963 (Gene tree)
Gene ID: 422673
Gene Symbol: PRDM5
Alias: PFM2
Full Name: PR/SET domain 5
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 81943 bases
Position: chr4:54227745-54309687
Accession: 422673
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000019484	zf-C2H2	PF00096.26	1.3e-70	1	12
ENSGALP00000019484	zf-C2H2	PF00096.26	1.3e-70	2	12
ENSGALP00000019484	zf-C2H2	PF00096.26	1.3e-70	3	12
ENSGALP00000019484	zf-C2H2	PF00096.26	1.3e-70	4	12
ENSGALP00000019484	zf-C2H2	PF00096.26	1.3e-70	5	12
ENSGALP00000019484	zf-C2H2	PF00096.26	1.3e-70	6	12
ENSGALP00000019484	zf-C2H2	PF00096.26	1.3e-70	7	12
ENSGALP00000019484	zf-C2H2	PF00096.26	1.3e-70	8	12
ENSGALP00000019484	zf-C2H2	PF00096.26	1.3e-70	9	12
ENSGALP00000019484	zf-C2H2	PF00096.26	1.3e-70	10	12
ENSGALP00000019484	zf-C2H2	PF00096.26	1.3e-70	11	12
ENSGALP00000019484	zf-C2H2	PF00096.26	1.3e-70	12	12
ENSGALP00000019484	zf-met	PF12874.7	1.4e-30	1	6
ENSGALP00000019484	zf-met	PF12874.7	1.4e-30	2	6
ENSGALP00000019484	zf-met	PF12874.7	1.4e-30	3	6
ENSGALP00000019484	zf-met	PF12874.7	1.4e-30	4	6
ENSGALP00000019484	zf-met	PF12874.7	1.4e-30	5	6
ENSGALP00000019484	zf-met	PF12874.7	1.4e-30	6	6
ENSGALP00000019484	zf-C2H2_jaz	PF12171.8	4.5e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000019510	PRDM5-201	1902	-	ENSGALP00000019484	633 (aa)	XP_420628	E1BV09

Gene Model

Click here to download ENSGALG00000011963's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000011963's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000011963	PRDM5	100	85.308	ENSG00000138738	PRDM5	100	85.308	Homo_sapiens
ENSGALG00000011963	PRDM5	100	82.177	ENSAPOG00000023220	prdm5	100	80.915	Acanthochromis_polyacanthus
ENSGALG00000011963	PRDM5	91	78.793	ENSAMEG00000003050	PRDM5	100	79.793	Ailuropoda_melanoleuca
ENSGALG00000011963	PRDM5	100	80.757	ENSACIG00000000406	prdm5	100	79.653	Amphilophus_citrinellus
ENSGALG00000011963	PRDM5	100	83.438	ENSAOCG00000014806	prdm5	100	83.281	Amphiprion_ocellaris
ENSGALG00000011963	PRDM5	100	74.504	ENSAPEG00000016846	prdm5	100	75.420	Amphiprion_percula
ENSGALG00000011963	PRDM5	100	85.489	ENSATEG00000013829	prdm5	99	85.489	Anabas_testudineus
ENSGALG00000011963	PRDM5	95	98.173	ENSAPLG00000013828	PRDM5	100	98.173	Anas_platyrhynchos
ENSGALG00000011963	PRDM5	100	89.258	ENSACAG00000012999	PRDM5	100	89.258	Anolis_carolinensis
ENSGALG00000011963	PRDM5	100	90.000	ENSANAG00000027411	PRDM5	100	90.000	Aotus_nancymaae
ENSGALG00000011963	PRDM5	100	82.808	ENSACLG00000017996	prdm5	100	81.546	Astatotilapia_calliptera
ENSGALG00000011963	PRDM5	85	83.333	ENSAMXG00000041864	prdm5	99	82.593	Astyanax_mexicanus
ENSGALG00000011963	PRDM5	100	84.202	ENSBTAG00000012111	PRDM5	100	84.202	Bos_taurus
ENSGALG00000011963	PRDM5	100	89.557	ENSCJAG00000003133	PRDM5	100	89.557	Callithrix_jacchus
ENSGALG00000011963	PRDM5	92	76.976	ENSCAFG00000004179	PRDM5	99	76.976	Canis_familiaris
ENSGALG00000011963	PRDM5	100	84.992	ENSCAFG00020017685	PRDM5	100	84.992	Canis_lupus_dingo
ENSGALG00000011963	PRDM5	100	83.570	ENSCHIG00000018772	PRDM5	100	83.570	Capra_hircus
ENSGALG00000011963	PRDM5	95	85.036	ENSTSYG00000009630	PRDM5	95	85.036	Carlito_syrichta
ENSGALG00000011963	PRDM5	91	89.333	ENSCAPG00000015217	PRDM5	100	89.333	Cavia_aperea
ENSGALG00000011963	PRDM5	95	89.241	ENSCPOG00000012883	PRDM5	100	89.333	Cavia_porcellus
ENSGALG00000011963	PRDM5	100	90.000	ENSCCAG00000023157	PRDM5	100	90.000	Cebus_capucinus
ENSGALG00000011963	PRDM5	100	90.000	ENSCATG00000042510	PRDM5	100	90.000	Cercocebus_atys
ENSGALG00000011963	PRDM5	95	88.924	ENSCLAG00000005392	PRDM5	100	89.333	Chinchilla_lanigera
ENSGALG00000011963	PRDM5	100	81.675	ENSCSAG00000003729	PRDM5	100	81.675	Chlorocebus_sabaeus
ENSGALG00000011963	PRDM5	99	79.720	ENSCHOG00000007801	PRDM5	91	79.720	Choloepus_hoffmanni
ENSGALG00000011963	PRDM5	100	94.852	ENSCPBG00000024735	PRDM5	100	94.852	Chrysemys_picta_bellii
ENSGALG00000011963	PRDM5	100	90.000	ENSCANG00000036807	PRDM5	100	90.000	Colobus_angolensis_palliatus
ENSGALG00000011963	PRDM5	100	90.667	ENSCGRG00001010581	Prdm5	100	90.667	Cricetulus_griseus_chok1gshd
ENSGALG00000011963	PRDM5	95	73.090	ENSCGRG00000010996	-	99	73.090	Cricetulus_griseus_crigri
ENSGALG00000011963	PRDM5	100	82.019	ENSCSEG00000019979	prdm5	100	82.177	Cynoglossus_semilaevis
ENSGALG00000011963	PRDM5	100	80.915	ENSCVAG00000013692	prdm5	100	79.811	Cyprinodon_variegatus
ENSGALG00000011963	PRDM5	100	83.333	ENSDARG00000006288	prdm5	100	83.333	Danio_rerio
ENSGALG00000011963	PRDM5	91	84.256	ENSDNOG00000002009	PRDM5	100	84.256	Dasypus_novemcinctus
ENSGALG00000011963	PRDM5	100	88.291	ENSDORG00000007739	Prdm5	100	88.291	Dipodomys_ordii
ENSGALG00000011963	PRDM5	91	80.702	ENSETEG00000020268	PRDM5	88	80.702	Echinops_telfairi
ENSGALG00000011963	PRDM5	99	71.677	ENSEBUG00000004301	prdm5	100	71.677	Eptatretus_burgeri
ENSGALG00000011963	PRDM5	100	90.667	ENSEASG00005018365	PRDM5	100	90.667	Equus_asinus_asinus
ENSGALG00000011963	PRDM5	99	83.912	ENSECAG00000011516	PRDM5	90	83.912	Equus_caballus
ENSGALG00000011963	PRDM5	100	67.901	ENSECAG00000024747	-	100	77.882	Equus_caballus
ENSGALG00000011963	PRDM5	99	77.893	ENSEEUG00000010306	PRDM5	100	77.893	Erinaceus_europaeus
ENSGALG00000011963	PRDM5	99	83.333	ENSELUG00000005894	prdm5	93	83.700	Esox_lucius
ENSGALG00000011963	PRDM5	100	84.834	ENSFCAG00000025656	PRDM5	100	84.834	Felis_catus
ENSGALG00000011963	PRDM5	99	95.016	ENSFALG00000008381	PRDM5	100	95.016	Ficedula_albicollis
ENSGALG00000011963	PRDM5	100	89.333	ENSFDAG00000021361	PRDM5	100	89.333	Fukomys_damarensis
ENSGALG00000011963	PRDM5	100	82.808	ENSFHEG00000013040	prdm5	100	83.438	Fundulus_heteroclitus
ENSGALG00000011963	PRDM5	95	76.316	ENSGMOG00000012038	prdm5	100	76.316	Gadus_morhua
ENSGALG00000011963	PRDM5	99	84.771	ENSGAFG00000019233	prdm5	95	84.771	Gambusia_affinis
ENSGALG00000011963	PRDM5	99	92.939	ENSGAGG00000020362	PRDM5	99	93.130	Gopherus_agassizii
ENSGALG00000011963	PRDM5	100	90.000	ENSGGOG00000013562	PRDM5	100	90.000	Gorilla_gorilla
ENSGALG00000011963	PRDM5	100	82.650	ENSHBUG00000023375	prdm5	100	81.546	Haplochromis_burtoni
ENSGALG00000011963	PRDM5	100	76.423	ENSHGLG00000003010	PRDM5	100	81.013	Heterocephalus_glaber_female
ENSGALG00000011963	PRDM5	100	89.557	ENSHGLG00100003696	PRDM5	100	89.557	Heterocephalus_glaber_male
ENSGALG00000011963	PRDM5	100	84.567	ENSHCOG00000012131	prdm5	100	84.567	Hippocampus_comes
ENSGALG00000011963	PRDM5	100	84.882	ENSIPUG00000001248	prdm5	99	85.197	Ictalurus_punctatus
ENSGALG00000011963	PRDM5	95	87.342	ENSSTOG00000004741	PRDM5	100	88.000	Ictidomys_tridecemlineatus
ENSGALG00000011963	PRDM5	95	88.924	ENSJJAG00000011464	Prdm5	100	88.924	Jaculus_jaculus
ENSGALG00000011963	PRDM5	100	83.123	ENSKMAG00000013663	prdm5	100	83.281	Kryptolebias_marmoratus
ENSGALG00000011963	PRDM5	100	85.331	ENSLBEG00000022736	prdm5	100	85.331	Labrus_bergylta
ENSGALG00000011963	PRDM5	91	92.042	ENSLACG00000009187	PRDM5	99	92.042	Latimeria_chalumnae
ENSGALG00000011963	PRDM5	100	87.520	ENSLOCG00000009778	prdm5	99	87.520	Lepisosteus_oculatus
ENSGALG00000011963	PRDM5	100	81.675	ENSLAFG00000006532	PRDM5	99	84.177	Loxodonta_africana
ENSGALG00000011963	PRDM5	100	90.000	ENSMFAG00000045845	PRDM5	100	90.000	Macaca_fascicularis
ENSGALG00000011963	PRDM5	100	90.000	ENSMMUG00000003249	PRDM5	100	90.000	Macaca_mulatta
ENSGALG00000011963	PRDM5	100	90.000	ENSMNEG00000019018	PRDM5	100	90.000	Macaca_nemestrina
ENSGALG00000011963	PRDM5	99	81.905	ENSMLEG00000023145	PRDM5	100	84.718	Mandrillus_leucophaeus
ENSGALG00000011963	PRDM5	100	83.754	ENSMAMG00000013419	prdm5	100	83.912	Mastacembelus_armatus
ENSGALG00000011963	PRDM5	100	82.650	ENSMZEG00005020645	prdm5	100	81.546	Maylandia_zebra
ENSGALG00000011963	PRDM5	95	99.336	ENSMGAG00000010710	PRDM5	100	99.336	Meleagris_gallopavo
ENSGALG00000011963	PRDM5	100	90.667	ENSMAUG00000006768	Prdm5	100	90.667	Mesocricetus_auratus
ENSGALG00000011963	PRDM5	100	89.333	ENSMICG00000001459	PRDM5	100	89.333	Microcebus_murinus
ENSGALG00000011963	PRDM5	100	90.667	ENSMOCG00000016267	Prdm5	100	90.667	Microtus_ochrogaster
ENSGALG00000011963	PRDM5	100	82.362	ENSMMOG00000006035	prdm5	100	82.362	Mola_mola
ENSGALG00000011963	PRDM5	100	85.624	ENSMODG00000018942	PRDM5	100	85.624	Monodelphis_domestica
ENSGALG00000011963	PRDM5	100	79.653	ENSMALG00000013934	prdm5	100	79.495	Monopterus_albus
ENSGALG00000011963	PRDM5	100	90.000	MGP_CAROLIEiJ_G0028463	Prdm5	100	90.000	Mus_caroli
ENSGALG00000011963	PRDM5	100	90.000	ENSMUSG00000029913	Prdm5	100	90.000	Mus_musculus
ENSGALG00000011963	PRDM5	100	90.000	MGP_PahariEiJ_G0022203	Prdm5	100	90.000	Mus_pahari
ENSGALG00000011963	PRDM5	100	90.000	MGP_SPRETEiJ_G0029467	Prdm5	100	90.000	Mus_spretus
ENSGALG00000011963	PRDM5	100	84.518	ENSMPUG00000017415	PRDM5	100	84.518	Mustela_putorius_furo
ENSGALG00000011963	PRDM5	91	75.856	ENSMLUG00000006097	PRDM5	100	75.856	Myotis_lucifugus
ENSGALG00000011963	PRDM5	100	90.000	ENSNGAG00000018317	Prdm5	100	90.000	Nannospalax_galili
ENSGALG00000011963	PRDM5	100	74.028	ENSNBRG00000004976	prdm5	100	77.516	Neolamprologus_brichardi
ENSGALG00000011963	PRDM5	100	90.000	ENSNLEG00000009107	PRDM5	100	90.000	Nomascus_leucogenys
ENSGALG00000011963	PRDM5	83	86.441	ENSMEUG00000006576	-	71	86.441	Notamacropus_eugenii
ENSGALG00000011963	PRDM5	95	65.909	ENSOPRG00000011066	-	89	65.702	Ochotona_princeps
ENSGALG00000011963	PRDM5	99	89.333	ENSODEG00000009133	PRDM5	100	89.333	Octodon_degus
ENSGALG00000011963	PRDM5	100	85.174	ENSONIG00000003111	prdm5	99	85.647	Oreochromis_niloticus
ENSGALG00000011963	PRDM5	68	98.889	ENSOANG00000006197	-	100	98.889	Ornithorhynchus_anatinus
ENSGALG00000011963	PRDM5	99	80.529	ENSOANG00000015109	PRDM5	97	80.529	Ornithorhynchus_anatinus
ENSGALG00000011963	PRDM5	93	77.966	ENSOCUG00000013454	PRDM5	100	79.153	Oryctolagus_cuniculus
ENSGALG00000011963	PRDM5	100	81.861	ENSORLG00000016247	prdm5	100	81.388	Oryzias_latipes
ENSGALG00000011963	PRDM5	100	81.861	ENSORLG00020018051	prdm5	100	81.230	Oryzias_latipes_hni
ENSGALG00000011963	PRDM5	100	81.861	ENSORLG00015013760	prdm5	100	81.388	Oryzias_latipes_hsok
ENSGALG00000011963	PRDM5	100	82.047	ENSOMEG00000005143	prdm5	100	81.260	Oryzias_melastigma
ENSGALG00000011963	PRDM5	84	77.154	ENSOGAG00000009996	PRDM5	98	76.766	Otolemur_garnettii
ENSGALG00000011963	PRDM5	95	82.971	ENSOARG00000015473	PRDM5	100	82.174	Ovis_aries
ENSGALG00000011963	PRDM5	99	82.222	ENSPPAG00000043045	PRDM5	100	84.746	Pan_paniscus
ENSGALG00000011963	PRDM5	100	84.834	ENSPPRG00000001020	PRDM5	100	84.834	Panthera_pardus
ENSGALG00000011963	PRDM5	95	84.385	ENSPTIG00000010807	PRDM5	95	84.385	Panthera_tigris_altaica
ENSGALG00000011963	PRDM5	100	90.000	ENSPTRG00000016403	PRDM5	100	90.000	Pan_troglodytes
ENSGALG00000011963	PRDM5	100	90.000	ENSPANG00000023612	PRDM5	100	90.000	Papio_anubis
ENSGALG00000011963	PRDM5	100	47.412	ENSPKIG00000015492	prdm5	100	61.260	Paramormyrops_kingsleyae
ENSGALG00000011963	PRDM5	100	94.471	ENSPSIG00000013505	PRDM5	100	94.471	Pelodiscus_sinensis
ENSGALG00000011963	PRDM5	100	80.757	ENSPMGG00000012622	prdm5	100	79.338	Periophthalmus_magnuspinnatus
ENSGALG00000011963	PRDM5	73	75.485	ENSPMAG00000005248	prdm5	100	76.456	Petromyzon_marinus
ENSGALG00000011963	PRDM5	99	76.571	ENSPFOG00000018630	prdm5	99	76.225	Poecilia_formosa
ENSGALG00000011963	PRDM5	100	85.016	ENSPLAG00000014148	prdm5	100	85.489	Poecilia_latipinna
ENSGALG00000011963	PRDM5	100	83.281	ENSPMEG00000018002	prdm5	100	83.754	Poecilia_mexicana
ENSGALG00000011963	PRDM5	100	83.281	ENSPREG00000018366	prdm5	100	83.754	Poecilia_reticulata
ENSGALG00000011963	PRDM5	100	85.308	ENSPPYG00000015031	PRDM5	100	85.308	Pongo_abelii
ENSGALG00000011963	PRDM5	95	78.904	ENSPCAG00000011671	PRDM5	100	78.904	Procavia_capensis
ENSGALG00000011963	PRDM5	100	89.333	ENSPCOG00000022828	PRDM5	100	89.333	Propithecus_coquereli
ENSGALG00000011963	PRDM5	95	79.568	ENSPVAG00000012309	PRDM5	100	79.568	Pteropus_vampyrus
ENSGALG00000011963	PRDM5	100	82.650	ENSPNYG00000012194	prdm5	100	81.388	Pundamilia_nyererei
ENSGALG00000011963	PRDM5	93	80.574	ENSPNAG00000023191	-	100	80.743	Pygocentrus_nattereri
ENSGALG00000011963	PRDM5	100	82.808	ENSPNAG00000026181	prdm5	100	83.438	Pygocentrus_nattereri
ENSGALG00000011963	PRDM5	99	77.496	ENSRNOG00000023679	Prdm5	99	77.496	Rattus_norvegicus
ENSGALG00000011963	PRDM5	100	90.000	ENSRBIG00000041307	PRDM5	100	90.000	Rhinopithecus_bieti
ENSGALG00000011963	PRDM5	95	71.111	ENSRROG00000035343	PRDM5	100	76.910	Rhinopithecus_roxellana
ENSGALG00000011963	PRDM5	100	90.000	ENSSBOG00000022100	PRDM5	100	90.000	Saimiri_boliviensis_boliviensis
ENSGALG00000011963	PRDM5	91	83.607	ENSSHAG00000003250	PRDM5	100	83.607	Sarcophilus_harrisii
ENSGALG00000011963	PRDM5	100	80.284	ENSSFOG00015020478	prdm5	100	79.811	Scleropages_formosus
ENSGALG00000011963	PRDM5	100	85.647	ENSSMAG00000018844	prdm5	99	85.647	Scophthalmus_maximus
ENSGALG00000011963	PRDM5	99	84.307	ENSSDUG00000020397	prdm5	100	83.281	Seriola_dumerili
ENSGALG00000011963	PRDM5	99	84.932	ENSSLDG00000013353	prdm5	100	83.281	Seriola_lalandi_dorsalis
ENSGALG00000011963	PRDM5	94	90.598	ENSSARG00000014129	-	71	90.598	Sorex_araneus
ENSGALG00000011963	PRDM5	100	97.785	ENSSPUG00000009941	PRDM5	100	97.785	Sphenodon_punctatus
ENSGALG00000011963	PRDM5	100	85.489	ENSSPAG00000013866	prdm5	100	84.385	Stegastes_partitus
ENSGALG00000011963	PRDM5	100	84.992	ENSSSCG00000009101	PRDM5	100	84.992	Sus_scrofa
ENSGALG00000011963	PRDM5	95	95.847	ENSTGUG00000001920	PRDM5	100	95.847	Taeniopygia_guttata
ENSGALG00000011963	PRDM5	100	81.861	ENSTRUG00000013850	prdm5	100	82.492	Takifugu_rubripes
ENSGALG00000011963	PRDM5	100	69.764	ENSTNIG00000005901	prdm5	100	69.764	Tetraodon_nigroviridis
ENSGALG00000011963	PRDM5	95	79.348	ENSTBEG00000015386	PRDM5	86	79.348	Tupaia_belangeri
ENSGALG00000011963	PRDM5	100	84.044	ENSTTRG00000010996	PRDM5	100	84.044	Tursiops_truncatus
ENSGALG00000011963	PRDM5	95	88.889	ENSUAMG00000009994	PRDM5	77	88.889	Ursus_americanus
ENSGALG00000011963	PRDM5	95	90.190	ENSUMAG00000003733	PRDM5	99	90.190	Ursus_maritimus
ENSGALG00000011963	PRDM5	97	75.285	ENSVPAG00000007435	PRDM5	100	75.285	Vicugna_pacos
ENSGALG00000011963	PRDM5	93	84.576	ENSVVUG00000013192	PRDM5	100	84.576	Vulpes_vulpes
ENSGALG00000011963	PRDM5	100	86.098	ENSXETG00000002101	prdm5	100	86.098	Xenopus_tropicalis
ENSGALG00000011963	PRDM5	100	83.438	ENSXCOG00000008567	prdm5	100	83.438	Xiphophorus_couchianus
ENSGALG00000011963	PRDM5	99	84.587	ENSXMAG00000013825	prdm5	100	83.438	Xiphophorus_maculatus