EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000012246 (Gene tree)
Gene ID: 424292
Gene Symbol: R3HDM1
Alias: KIAA0029|R3HDM
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 42653 bases
Position: chr7:30584704-30627356
Accession: 9757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000019969	R3H	PF01424.22	8e-12	1	1
ENSGALP00000054146	R3H	PF01424.22	1e-11	1	1
ENSGALP00000054689	R3H	PF01424.22	3.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000053334	R3HDM1-201	3405	-	ENSGALP00000054146	1051 (aa)	-	A0A1D5PMR0
ENSGALT00000048928	R3HDM1-202	3034	-	ENSGALP00000054689	997 (aa)	-	A0A1D5PP91
ENSGALT00000019996	R3HDM1-203	3750	-	ENSGALP00000019969	890 (aa)	-	E1C2S9

Gene Model

Click here to download ENSGALG00000012246's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000012246's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000012246	R3HDM1	99	85.902	ENSG00000048991	R3HDM1	88	89.610	Homo_sapiens
ENSGALG00000012246	R3HDM1	85	65.049	ENSAPOG00000020850	r3hdm1	92	61.376	Acanthochromis_polyacanthus
ENSGALG00000012246	R3HDM1	99	85.902	ENSAMEG00000014886	R3HDM1	100	55.794	Ailuropoda_melanoleuca
ENSGALG00000012246	R3HDM1	85	65.049	ENSAOCG00000005192	r3hdm1	91	58.088	Amphiprion_ocellaris
ENSGALG00000012246	R3HDM1	84	65.132	ENSAPEG00000016108	r3hdm1	91	61.333	Amphiprion_percula
ENSGALG00000012246	R3HDM1	85	64.935	ENSATEG00000000232	r3hdm1	91	62.366	Anabas_testudineus
ENSGALG00000012246	R3HDM1	99	95.207	ENSAPLG00000015231	R3HDM1	92	86.667	Anas_platyrhynchos
ENSGALG00000012246	R3HDM1	99	86.230	ENSACAG00000001676	R3HDM1	84	86.275	Anolis_carolinensis
ENSGALG00000012246	R3HDM1	99	85.902	ENSANAG00000035334	R3HDM1	88	85.948	Aotus_nancymaae
ENSGALG00000012246	R3HDM1	85	64.078	ENSACLG00000027282	r3hdm1	85	64.078	Astatotilapia_calliptera
ENSGALG00000012246	R3HDM1	99	71.197	ENSAMXG00000003536	r3hdm1	85	71.290	Astyanax_mexicanus
ENSGALG00000012246	R3HDM1	61	39.580	ENSAMXG00000020587	arpp21	84	42.521	Astyanax_mexicanus
ENSGALG00000012246	R3HDM1	99	73.871	ENSAMXG00000012861	R3HDM1	100	54.762	Astyanax_mexicanus
ENSGALG00000012246	R3HDM1	99	89.931	ENSBTAG00000013302	R3HDM1	87	75.122	Bos_taurus
ENSGALG00000012246	R3HDM1	99	85.902	ENSCJAG00000011718	R3HDM1	88	85.948	Callithrix_jacchus
ENSGALG00000012246	R3HDM1	99	85.902	ENSCAFG00000005075	R3HDM1	83	85.948	Canis_familiaris
ENSGALG00000012246	R3HDM1	99	85.902	ENSCAFG00020016119	R3HDM1	84	85.948	Canis_lupus_dingo
ENSGALG00000012246	R3HDM1	99	89.931	ENSCHIG00000020851	R3HDM1	100	60.578	Capra_hircus
ENSGALG00000012246	R3HDM1	99	81.967	ENSCPOG00000012784	R3HDM1	100	69.896	Cavia_porcellus
ENSGALG00000012246	R3HDM1	99	85.574	ENSCCAG00000027199	R3HDM1	94	77.465	Cebus_capucinus
ENSGALG00000012246	R3HDM1	99	85.246	ENSCATG00000023642	R3HDM1	88	85.294	Cercocebus_atys
ENSGALG00000012246	R3HDM1	99	84.918	ENSCLAG00000007962	R3HDM1	100	72.125	Chinchilla_lanigera
ENSGALG00000012246	R3HDM1	99	85.574	ENSCSAG00000016356	R3HDM1	84	85.621	Chlorocebus_sabaeus
ENSGALG00000012246	R3HDM1	82	81.679	ENSCHOG00000013638	R3HDM1	81	81.679	Choloepus_hoffmanni
ENSGALG00000012246	R3HDM1	96	93.307	ENSCPBG00000009645	R3HDM1	100	83.021	Chrysemys_picta_bellii
ENSGALG00000012246	R3HDM1	99	85.902	ENSCANG00000034748	R3HDM1	94	77.597	Colobus_angolensis_palliatus
ENSGALG00000012246	R3HDM1	99	85.246	ENSCGRG00001012357	R3hdm1	97	56.594	Cricetulus_griseus_chok1gshd
ENSGALG00000012246	R3HDM1	99	85.246	ENSCGRG00000012080	R3hdm1	100	74.048	Cricetulus_griseus_crigri
ENSGALG00000012246	R3HDM1	85	64.765	ENSCSEG00000008944	r3hdm1	91	59.309	Cynoglossus_semilaevis
ENSGALG00000012246	R3HDM1	84	64.590	ENSCVAG00000007582	r3hdm1	87	60.267	Cyprinodon_variegatus
ENSGALG00000012246	R3HDM1	61	36.876	ENSDARG00000061081	arpp21	86	39.587	Danio_rerio
ENSGALG00000012246	R3HDM1	97	81.979	ENSDNOG00000000771	R3HDM1	100	53.602	Dasypus_novemcinctus
ENSGALG00000012246	R3HDM1	95	83.333	ENSETEG00000013606	R3HDM1	79	84.691	Echinops_telfairi
ENSGALG00000012246	R3HDM1	56	53.974	ENSEBUG00000014746	arpp21	84	54.455	Eptatretus_burgeri
ENSGALG00000012246	R3HDM1	99	85.246	ENSEASG00005007392	R3HDM1	100	71.209	Equus_asinus_asinus
ENSGALG00000012246	R3HDM1	99	90.278	ENSECAG00000019114	R3HDM1	100	71.171	Equus_caballus
ENSGALG00000012246	R3HDM1	83	75.410	ENSEEUG00000012589	R3HDM1	76	82.759	Erinaceus_europaeus
ENSGALG00000012246	R3HDM1	97	76.426	ENSELUG00000004909	R3HDM1	85	76.226	Esox_lucius
ENSGALG00000012246	R3HDM1	95	75.385	ENSELUG00000014413	r3hdm1	86	75.385	Esox_lucius
ENSGALG00000012246	R3HDM1	99	90.625	ENSFCAG00000027113	R3HDM1	100	71.661	Felis_catus
ENSGALG00000012246	R3HDM1	93	83.251	ENSFALG00000013731	R3HDM1	79	88.889	Ficedula_albicollis
ENSGALG00000012246	R3HDM1	99	85.574	ENSFDAG00000016478	R3HDM1	100	73.519	Fukomys_damarensis
ENSGALG00000012246	R3HDM1	84	64.474	ENSFHEG00000018713	r3hdm1	84	65.132	Fundulus_heteroclitus
ENSGALG00000012246	R3HDM1	52	78.740	ENSGMOG00000006042	-	52	79.026	Gadus_morhua
ENSGALG00000012246	R3HDM1	84	65.132	ENSGAFG00000006203	r3hdm1	90	60.000	Gambusia_affinis
ENSGALG00000012246	R3HDM1	90	64.401	ENSGACG00000014925	r3hdm1	79	65.049	Gasterosteus_aculeatus
ENSGALG00000012246	R3HDM1	100	85.437	ENSGAGG00000007840	R3HDM1	89	83.662	Gopherus_agassizii
ENSGALG00000012246	R3HDM1	99	85.902	ENSGGOG00000008156	R3HDM1	88	85.948	Gorilla_gorilla
ENSGALG00000012246	R3HDM1	99	84.918	ENSHGLG00000015718	R3HDM1	100	73.077	Heterocephalus_glaber_female
ENSGALG00000012246	R3HDM1	99	84.918	ENSHGLG00100003184	-	100	73.077	Heterocephalus_glaber_male
ENSGALG00000012246	R3HDM1	98	51.268	ENSHGLG00100015374	-	94	51.586	Heterocephalus_glaber_male
ENSGALG00000012246	R3HDM1	85	62.376	ENSHCOG00000013366	r3hdm1	90	57.682	Hippocampus_comes
ENSGALG00000012246	R3HDM1	99	71.711	ENSIPUG00000013629	r3hdm1	86	71.711	Ictalurus_punctatus
ENSGALG00000012246	R3HDM1	86	71.845	ENSIPUG00000001676	R3HDM1	85	71.935	Ictalurus_punctatus
ENSGALG00000012246	R3HDM1	55	37.190	ENSIPUG00000020552	arpp21	74	41.459	Ictalurus_punctatus
ENSGALG00000012246	R3HDM1	99	85.902	ENSSTOG00000007572	R3HDM1	100	74.913	Ictidomys_tridecemlineatus
ENSGALG00000012246	R3HDM1	99	80.968	ENSLACG00000005334	R3HDM1	100	71.811	Latimeria_chalumnae
ENSGALG00000012246	R3HDM1	99	73.718	ENSLOCG00000001641	r3hdm1	83	75.399	Lepisosteus_oculatus
ENSGALG00000012246	R3HDM1	99	85.574	ENSLAFG00000009065	R3HDM1	95	74.679	Loxodonta_africana
ENSGALG00000012246	R3HDM1	99	85.902	ENSMFAG00000030331	R3HDM1	88	85.948	Macaca_fascicularis
ENSGALG00000012246	R3HDM1	99	85.902	ENSMMUG00000009844	R3HDM1	88	85.948	Macaca_mulatta
ENSGALG00000012246	R3HDM1	99	85.902	ENSMNEG00000027793	R3HDM1	88	85.948	Macaca_nemestrina
ENSGALG00000012246	R3HDM1	99	85.902	ENSMLEG00000043189	R3HDM1	88	85.948	Mandrillus_leucophaeus
ENSGALG00000012246	R3HDM1	84	64.803	ENSMAMG00000004532	r3hdm1	87	60.477	Mastacembelus_armatus
ENSGALG00000012246	R3HDM1	85	64.078	ENSMZEG00005003157	r3hdm1	91	59.947	Maylandia_zebra
ENSGALG00000012246	R3HDM1	99	98.007	ENSMGAG00000012461	R3HDM1	92	89.650	Meleagris_gallopavo
ENSGALG00000012246	R3HDM1	99	85.574	ENSMAUG00000010315	R3hdm1	100	74.394	Mesocricetus_auratus
ENSGALG00000012246	R3HDM1	94	75.515	ENSMICG00000042655	-	94	75.803	Microcebus_murinus
ENSGALG00000012246	R3HDM1	99	85.246	ENSMICG00000005900	-	88	85.294	Microcebus_murinus
ENSGALG00000012246	R3HDM1	87	82.222	ENSMODG00000000923	R3HDM1	80	82.222	Monodelphis_domestica
ENSGALG00000012246	R3HDM1	98	65.049	ENSMALG00000009000	r3hdm1	91	58.313	Monopterus_albus
ENSGALG00000012246	R3HDM1	99	85.574	MGP_CAROLIEiJ_G0014543	R3hdm1	100	82.008	Mus_caroli
ENSGALG00000012246	R3HDM1	99	85.574	ENSMUSG00000056211	R3hdm1	100	82.008	Mus_musculus
ENSGALG00000012246	R3HDM1	99	85.574	MGP_PahariEiJ_G0027779	R3hdm1	100	82.008	Mus_pahari
ENSGALG00000012246	R3HDM1	99	85.574	MGP_SPRETEiJ_G0015350	R3hdm1	100	82.008	Mus_spretus
ENSGALG00000012246	R3HDM1	99	85.902	ENSMPUG00000002412	R3HDM1	100	55.632	Mustela_putorius_furo
ENSGALG00000012246	R3HDM1	99	84.918	ENSMLUG00000013824	R3HDM1	100	55.726	Myotis_lucifugus
ENSGALG00000012246	R3HDM1	99	85.902	ENSNLEG00000008622	R3HDM1	94	77.681	Nomascus_leucogenys
ENSGALG00000012246	R3HDM1	86	70.455	ENSMEUG00000011784	R3HDM1	91	62.894	Notamacropus_eugenii
ENSGALG00000012246	R3HDM1	99	85.246	ENSODEG00000008607	R3HDM1	100	73.010	Octodon_degus
ENSGALG00000012246	R3HDM1	99	63.924	ENSONIG00000012017	r3hdm1	90	64.557	Oreochromis_niloticus
ENSGALG00000012246	R3HDM1	99	84.918	ENSOANG00000007987	R3HDM1	83	84.967	Ornithorhynchus_anatinus
ENSGALG00000012246	R3HDM1	86	84.918	ENSOCUG00000017366	R3HDM1	98	52.212	Oryctolagus_cuniculus
ENSGALG00000012246	R3HDM1	84	65.461	ENSORLG00000004297	r3hdm1	80	66.118	Oryzias_latipes
ENSGALG00000012246	R3HDM1	86	65.461	ENSORLG00015017355	r3hdm1	91	61.867	Oryzias_latipes_hsok
ENSGALG00000012246	R3HDM1	99	85.574	ENSOGAG00000003136	R3HDM1	83	85.621	Otolemur_garnettii
ENSGALG00000012246	R3HDM1	99	85.246	ENSOARG00000010788	R3HDM1	100	55.407	Ovis_aries
ENSGALG00000012246	R3HDM1	99	85.902	ENSPPAG00000027858	R3HDM1	94	77.297	Pan_paniscus
ENSGALG00000012246	R3HDM1	99	85.902	ENSPPRG00000002626	R3HDM1	94	78.672	Panthera_pardus
ENSGALG00000012246	R3HDM1	99	85.902	ENSPTIG00000016581	R3HDM1	94	78.455	Panthera_tigris_altaica
ENSGALG00000012246	R3HDM1	99	85.902	ENSPTRG00000012494	R3HDM1	94	77.297	Pan_troglodytes
ENSGALG00000012246	R3HDM1	99	85.902	ENSPANG00000026448	R3HDM1	88	85.948	Papio_anubis
ENSGALG00000012246	R3HDM1	99	71.845	ENSPKIG00000004328	r3hdm1	91	61.697	Paramormyrops_kingsleyae
ENSGALG00000012246	R3HDM1	99	87.869	ENSPSIG00000012915	R3HDM1	83	87.908	Pelodiscus_sinensis
ENSGALG00000012246	R3HDM1	99	85.574	ENSPEMG00000015187	R3hdm1	100	74.394	Peromyscus_maniculatus_bairdii
ENSGALG00000012246	R3HDM1	89	59.119	ENSPMAG00000003369	-	94	59.561	Petromyzon_marinus
ENSGALG00000012246	R3HDM1	99	84.641	ENSPCIG00000002491	R3HDM1	100	73.213	Phascolarctos_cinereus
ENSGALG00000012246	R3HDM1	84	64.686	ENSPFOG00000015036	r3hdm1	78	67.974	Poecilia_formosa
ENSGALG00000012246	R3HDM1	84	64.686	ENSPLAG00000018042	r3hdm1	80	65.347	Poecilia_latipinna
ENSGALG00000012246	R3HDM1	84	59.143	ENSPMEG00000023947	r3hdm1	80	65.347	Poecilia_mexicana
ENSGALG00000012246	R3HDM1	84	65.132	ENSPREG00000007902	r3hdm1	80	68.730	Poecilia_reticulata
ENSGALG00000012246	R3HDM1	99	83.987	ENSPPYG00000012815	R3HDM1	83	84.039	Pongo_abelii
ENSGALG00000012246	R3HDM1	97	87.671	ENSPCAG00000006208	R3HDM1	79	87.671	Procavia_capensis
ENSGALG00000012246	R3HDM1	96	85.926	ENSPCOG00000012698	R3HDM1	86	85.978	Propithecus_coquereli
ENSGALG00000012246	R3HDM1	99	76.721	ENSPVAG00000006098	R3HDM1	83	76.797	Pteropus_vampyrus
ENSGALG00000012246	R3HDM1	99	61.874	ENSPNAG00000005436	R3HDM1	99	62.106	Pygocentrus_nattereri
ENSGALG00000012246	R3HDM1	59	40.242	ENSPNAG00000004162	arpp21	81	40.625	Pygocentrus_nattereri
ENSGALG00000012246	R3HDM1	99	71.521	ENSPNAG00000013952	r3hdm1	85	71.613	Pygocentrus_nattereri
ENSGALG00000012246	R3HDM1	99	85.574	ENSRNOG00000004099	R3hdm1	100	56.010	Rattus_norvegicus
ENSGALG00000012246	R3HDM1	96	86.716	ENSRBIG00000033317	R3HDM1	100	77.441	Rhinopithecus_bieti
ENSGALG00000012246	R3HDM1	95	90.164	ENSRROG00000034534	R3HDM1	94	77.597	Rhinopithecus_roxellana
ENSGALG00000012246	R3HDM1	99	85.902	ENSSBOG00000020389	R3HDM1	94	77.681	Saimiri_boliviensis_boliviensis
ENSGALG00000012246	R3HDM1	99	85.294	ENSSHAG00000016999	R3HDM1	87	85.294	Sarcophilus_harrisii
ENSGALG00000012246	R3HDM1	99	78.425	ENSSFOG00015014134	r3hdm1	100	57.285	Scleropages_formosus
ENSGALG00000012246	R3HDM1	100	61.165	ENSSFOG00015019851	-	99	60.870	Scleropages_formosus
ENSGALG00000012246	R3HDM1	98	64.026	ENSSMAG00000001669	r3hdm1	89	64.026	Scophthalmus_maximus
ENSGALG00000012246	R3HDM1	85	65.049	ENSSDUG00000010749	r3hdm1	87	61.702	Seriola_dumerili
ENSGALG00000012246	R3HDM1	98	65.049	ENSSLDG00000004499	r3hdm1	91	57.457	Seriola_lalandi_dorsalis
ENSGALG00000012246	R3HDM1	74	75.000	ENSSARG00000000352	-	64	76.860	Sorex_araneus
ENSGALG00000012246	R3HDM1	99	86.275	ENSSPUG00000004167	R3HDM1	83	86.319	Sphenodon_punctatus
ENSGALG00000012246	R3HDM1	85	65.049	ENSSPAG00000004648	r3hdm1	91	61.333	Stegastes_partitus
ENSGALG00000012246	R3HDM1	99	90.278	ENSSSCG00000015692	R3HDM1	94	79.734	Sus_scrofa
ENSGALG00000012246	R3HDM1	99	88.197	ENSTGUG00000011750	R3HDM1	83	88.235	Taeniopygia_guttata
ENSGALG00000012246	R3HDM1	85	64.169	ENSTRUG00000011654	r3hdm1	80	64.169	Takifugu_rubripes
ENSGALG00000012246	R3HDM1	85	64.052	ENSTNIG00000010362	r3hdm1	84	65.033	Tetraodon_nigroviridis
ENSGALG00000012246	R3HDM1	99	85.902	ENSTTRG00000003935	R3HDM1	100	52.677	Tursiops_truncatus
ENSGALG00000012246	R3HDM1	64	85.342	ENSUAMG00000024806	R3HDM1	93	75.926	Ursus_americanus
ENSGALG00000012246	R3HDM1	100	85.342	ENSUMAG00000005552	R3HDM1	100	71.581	Ursus_maritimus
ENSGALG00000012246	R3HDM1	96	82.353	ENSVPAG00000007333	R3HDM1	80	82.418	Vicugna_pacos
ENSGALG00000012246	R3HDM1	100	85.342	ENSVVUG00000006457	R3HDM1	100	74.695	Vulpes_vulpes
ENSGALG00000012246	R3HDM1	87	81.250	ENSXETG00000019330	r3hdm1	81	81.046	Xenopus_tropicalis
ENSGALG00000012246	R3HDM1	59	62.541	ENSXCOG00000017448	r3hdm1	80	62.541	Xiphophorus_couchianus
ENSGALG00000012246	R3HDM1	84	65.132	ENSXMAG00000007885	r3hdm1	78	68.078	Xiphophorus_maculatus