EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000012291 (Gene tree)
Gene ID: 395486
Gene Symbol: POLR2F
Alias: RPB6
Full Name: Gallus gallus RNA polymerase II subunit F (POLR2F)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 3614 bases
Position: chr1:51067332-51070945
Accession: NM_204734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000020057	RNA_pol_Rpb6	PF01192.22	8.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000020084	-	545	-	ENSGALP00000020057	127 (aa)	-	Q9PT88

Gene Model

Click here to download ENSGALG00000012291's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03020	RNA polymerase	KEGG
gga04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000012291's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000012291	POLR2F	100	97.638	ENSG00000100142	POLR2F	100	97.638	Homo_sapiens
ENSGALG00000012291	POLR2F	100	89.764	ENSAPOG00000002902	polr2f	100	89.764	Acanthochromis_polyacanthus
ENSGALG00000012291	POLR2F	100	96.850	ENSAMEG00000010331	POLR2F	100	96.850	Ailuropoda_melanoleuca
ENSGALG00000012291	POLR2F	100	89.764	ENSACIG00000000923	polr2f	100	89.764	Amphilophus_citrinellus
ENSGALG00000012291	POLR2F	100	90.551	ENSAOCG00000003182	polr2f	100	90.551	Amphiprion_ocellaris
ENSGALG00000012291	POLR2F	100	90.551	ENSAPEG00000012999	polr2f	100	90.551	Amphiprion_percula
ENSGALG00000012291	POLR2F	100	89.764	ENSATEG00000008929	polr2f	100	89.764	Anabas_testudineus
ENSGALG00000012291	POLR2F	80	99.010	ENSAPLG00000015235	POLR2F	85	98.113	Anas_platyrhynchos
ENSGALG00000012291	POLR2F	100	98.425	ENSACAG00000015288	POLR2F	100	98.425	Anolis_carolinensis
ENSGALG00000012291	POLR2F	100	97.638	ENSANAG00000020840	POLR2F	100	97.638	Aotus_nancymaae
ENSGALG00000012291	POLR2F	100	88.976	ENSACLG00000016129	polr2f	100	88.976	Astatotilapia_calliptera
ENSGALG00000012291	POLR2F	100	90.551	ENSAMXG00000012812	polr2f	100	90.551	Astyanax_mexicanus
ENSGALG00000012291	POLR2F	100	97.638	ENSBTAG00000004820	POLR2F	100	97.638	Bos_taurus
ENSGALG00000012291	POLR2F	66	73.810	WBGene00007355	rpb-6	68	70.213	Caenorhabditis_elegans
ENSGALG00000012291	POLR2F	100	97.638	ENSCJAG00000048241	POLR2F	100	97.638	Callithrix_jacchus
ENSGALG00000012291	POLR2F	100	96.850	ENSCAFG00000001437	POLR2F	100	96.850	Canis_familiaris
ENSGALG00000012291	POLR2F	95	96.694	ENSCHIG00000012907	POLR2F	95	96.694	Capra_hircus
ENSGALG00000012291	POLR2F	100	96.850	ENSTSYG00000008187	POLR2F	100	96.850	Carlito_syrichta
ENSGALG00000012291	POLR2F	94	97.500	ENSCAPG00000013419	POLR2F	94	97.500	Cavia_aperea
ENSGALG00000012291	POLR2F	100	97.638	ENSCPOG00000034094	POLR2F	100	97.638	Cavia_porcellus
ENSGALG00000012291	POLR2F	100	97.638	ENSCCAG00000036489	POLR2F	100	97.638	Cebus_capucinus
ENSGALG00000012291	POLR2F	100	97.638	ENSCATG00000041014	POLR2F	100	97.638	Cercocebus_atys
ENSGALG00000012291	POLR2F	100	97.638	ENSCLAG00000017167	POLR2F	100	97.638	Chinchilla_lanigera
ENSGALG00000012291	POLR2F	100	97.638	ENSCSAG00000006862	POLR2F	100	97.638	Chlorocebus_sabaeus
ENSGALG00000012291	POLR2F	95	97.521	ENSCPBG00000023030	POLR2F	62	97.521	Chrysemys_picta_bellii
ENSGALG00000012291	POLR2F	81	76.923	ENSCING00000019359	-	73	76.923	Ciona_intestinalis
ENSGALG00000012291	POLR2F	100	97.638	ENSCANG00000041884	POLR2F	100	97.638	Colobus_angolensis_palliatus
ENSGALG00000012291	POLR2F	100	97.638	ENSCGRG00001023541	POLR2F	100	97.638	Cricetulus_griseus_chok1gshd
ENSGALG00000012291	POLR2F	100	97.638	ENSCGRG00000011921	POLR2F	100	97.638	Cricetulus_griseus_crigri
ENSGALG00000012291	POLR2F	83	91.509	ENSCSEG00000006848	polr2f	83	91.509	Cynoglossus_semilaevis
ENSGALG00000012291	POLR2F	100	88.976	ENSCVAG00000010437	polr2f	100	88.976	Cyprinodon_variegatus
ENSGALG00000012291	POLR2F	100	88.189	ENSDARG00000036625	polr2f	100	88.189	Danio_rerio
ENSGALG00000012291	POLR2F	100	97.638	ENSDNOG00000005884	POLR2F	100	97.638	Dasypus_novemcinctus
ENSGALG00000012291	POLR2F	100	97.638	ENSDORG00000024789	Polr2f	100	97.638	Dipodomys_ordii
ENSGALG00000012291	POLR2F	78	71.569	FBgn0003275	RpII18	78	71.569	Drosophila_melanogaster
ENSGALG00000012291	POLR2F	72	71.429	ENSEBUG00000002842	-	90	63.462	Eptatretus_burgeri
ENSGALG00000012291	POLR2F	56	78.873	ENSEBUG00000008509	polr2f	73	78.873	Eptatretus_burgeri
ENSGALG00000012291	POLR2F	66	95.238	ENSEASG00005018802	-	76	95.238	Equus_asinus_asinus
ENSGALG00000012291	POLR2F	100	95.276	ENSEEUG00000011014	POLR2F	100	95.276	Erinaceus_europaeus
ENSGALG00000012291	POLR2F	100	87.402	ENSELUG00000000319	polr2f	100	87.402	Esox_lucius
ENSGALG00000012291	POLR2F	100	96.850	ENSFCAG00000002806	POLR2F	100	96.850	Felis_catus
ENSGALG00000012291	POLR2F	100	97.638	ENSFDAG00000009926	POLR2F	100	97.638	Fukomys_damarensis
ENSGALG00000012291	POLR2F	88	89.286	ENSFHEG00000005448	polr2f	84	89.623	Fundulus_heteroclitus
ENSGALG00000012291	POLR2F	100	84.252	ENSGMOG00000009967	polr2f	100	84.252	Gadus_morhua
ENSGALG00000012291	POLR2F	100	88.189	ENSGAFG00000017573	polr2f	100	88.189	Gambusia_affinis
ENSGALG00000012291	POLR2F	100	84.252	ENSGACG00000007322	polr2f	100	84.252	Gasterosteus_aculeatus
ENSGALG00000012291	POLR2F	100	98.425	ENSGAGG00000021757	POLR2F	100	98.425	Gopherus_agassizii
ENSGALG00000012291	POLR2F	100	97.638	ENSGGOG00000005213	POLR2F	100	97.638	Gorilla_gorilla
ENSGALG00000012291	POLR2F	100	88.976	ENSHBUG00000022089	polr2f	100	88.976	Haplochromis_burtoni
ENSGALG00000012291	POLR2F	100	97.638	ENSHGLG00000018942	POLR2F	100	97.638	Heterocephalus_glaber_female
ENSGALG00000012291	POLR2F	100	97.638	ENSHGLG00100012851	POLR2F	100	97.638	Heterocephalus_glaber_male
ENSGALG00000012291	POLR2F	100	85.827	ENSHCOG00000006149	polr2f	100	85.827	Hippocampus_comes
ENSGALG00000012291	POLR2F	76	91.753	ENSIPUG00000000814	polr2f	100	91.753	Ictalurus_punctatus
ENSGALG00000012291	POLR2F	100	97.638	ENSSTOG00000025722	POLR2F	100	97.638	Ictidomys_tridecemlineatus
ENSGALG00000012291	POLR2F	100	97.638	ENSJJAG00000008097	Polr2f	100	97.638	Jaculus_jaculus
ENSGALG00000012291	POLR2F	100	89.764	ENSKMAG00000014230	polr2f	100	89.764	Kryptolebias_marmoratus
ENSGALG00000012291	POLR2F	83	87.736	ENSLBEG00000008383	polr2f	88	87.736	Labrus_bergylta
ENSGALG00000012291	POLR2F	100	93.701	ENSLACG00000003931	POLR2F	100	93.701	Latimeria_chalumnae
ENSGALG00000012291	POLR2F	100	88.462	ENSLOCG00000011827	polr2f	100	88.462	Lepisosteus_oculatus
ENSGALG00000012291	POLR2F	100	97.638	ENSLAFG00000012632	POLR2F	100	97.638	Loxodonta_africana
ENSGALG00000012291	POLR2F	100	97.638	ENSMFAG00000033687	POLR2F	100	97.638	Macaca_fascicularis
ENSGALG00000012291	POLR2F	95	96.694	ENSMMUG00000038231	POLR2F	99	96.694	Macaca_mulatta
ENSGALG00000012291	POLR2F	100	97.638	ENSMNEG00000044365	POLR2F	100	97.638	Macaca_nemestrina
ENSGALG00000012291	POLR2F	100	97.638	ENSMLEG00000033077	POLR2F	100	97.638	Mandrillus_leucophaeus
ENSGALG00000012291	POLR2F	100	88.976	ENSMAMG00000008056	polr2f	100	88.976	Mastacembelus_armatus
ENSGALG00000012291	POLR2F	100	88.976	ENSMZEG00005005705	polr2f	100	88.976	Maylandia_zebra
ENSGALG00000012291	POLR2F	100	100.000	ENSMGAG00000012504	POLR2F	100	100.000	Meleagris_gallopavo
ENSGALG00000012291	POLR2F	100	97.638	ENSMAUG00000018586	Polr2f	100	97.638	Mesocricetus_auratus
ENSGALG00000012291	POLR2F	100	97.638	ENSMICG00000013128	POLR2F	100	97.638	Microcebus_murinus
ENSGALG00000012291	POLR2F	100	97.638	ENSMOCG00000000237	Polr2f	100	97.638	Microtus_ochrogaster
ENSGALG00000012291	POLR2F	100	90.551	ENSMMOG00000005106	polr2f	100	90.551	Mola_mola
ENSGALG00000012291	POLR2F	100	97.638	ENSMODG00000019063	POLR2F	100	97.638	Monodelphis_domestica
ENSGALG00000012291	POLR2F	100	89.764	ENSMALG00000001444	polr2f	100	89.764	Monopterus_albus
ENSGALG00000012291	POLR2F	100	96.850	MGP_CAROLIEiJ_G0020006	Polr2f	100	96.850	Mus_caroli
ENSGALG00000012291	POLR2F	100	96.850	ENSMUSG00000033020	Polr2f	100	96.939	Mus_musculus
ENSGALG00000012291	POLR2F	100	96.850	MGP_PahariEiJ_G0020008	Polr2f	100	96.850	Mus_pahari
ENSGALG00000012291	POLR2F	100	96.850	MGP_SPRETEiJ_G0020904	Polr2f	100	96.850	Mus_spretus
ENSGALG00000012291	POLR2F	100	96.850	ENSMPUG00000012997	POLR2F	100	96.850	Mustela_putorius_furo
ENSGALG00000012291	POLR2F	100	95.349	ENSMLUG00000014315	-	100	95.349	Myotis_lucifugus
ENSGALG00000012291	POLR2F	98	90.323	ENSMLUG00000029612	-	98	90.323	Myotis_lucifugus
ENSGALG00000012291	POLR2F	100	97.638	ENSNGAG00000020682	Polr2f	100	97.638	Nannospalax_galili
ENSGALG00000012291	POLR2F	100	89.764	ENSNBRG00000002492	polr2f	100	89.764	Neolamprologus_brichardi
ENSGALG00000012291	POLR2F	100	97.638	ENSNLEG00000014987	-	100	97.638	Nomascus_leucogenys
ENSGALG00000012291	POLR2F	100	97.638	ENSODEG00000014123	POLR2F	100	97.638	Octodon_degus
ENSGALG00000012291	POLR2F	100	89.764	ENSONIG00000008394	polr2f	100	89.764	Oreochromis_niloticus
ENSGALG00000012291	POLR2F	100	98.425	ENSOANG00000014684	POLR2F	100	98.425	Ornithorhynchus_anatinus
ENSGALG00000012291	POLR2F	100	97.638	ENSOCUG00000012064	POLR2F	100	97.638	Oryctolagus_cuniculus
ENSGALG00000012291	POLR2F	100	88.189	ENSORLG00000014580	polr2f	100	88.189	Oryzias_latipes
ENSGALG00000012291	POLR2F	100	88.976	ENSORLG00020006910	polr2f	100	88.976	Oryzias_latipes_hni
ENSGALG00000012291	POLR2F	94	83.333	ENSORLG00015015332	polr2f	77	86.842	Oryzias_latipes_hsok
ENSGALG00000012291	POLR2F	80	86.275	ENSOMEG00000006530	polr2f	65	80.909	Oryzias_melastigma
ENSGALG00000012291	POLR2F	100	97.638	ENSOGAG00000025463	POLR2F	100	97.638	Otolemur_garnettii
ENSGALG00000012291	POLR2F	100	97.638	ENSOARG00000014692	POLR2F	100	97.638	Ovis_aries
ENSGALG00000012291	POLR2F	100	97.638	ENSPPAG00000024276	POLR2F	100	97.638	Pan_paniscus
ENSGALG00000012291	POLR2F	100	96.850	ENSPPRG00000013030	POLR2F	100	96.850	Panthera_pardus
ENSGALG00000012291	POLR2F	82	95.192	ENSPTIG00000000632	POLR2F	85	95.192	Panthera_tigris_altaica
ENSGALG00000012291	POLR2F	100	97.638	ENSPTRG00000014356	POLR2F	100	97.638	Pan_troglodytes
ENSGALG00000012291	POLR2F	100	97.638	ENSPANG00000023979	POLR2F	100	97.638	Papio_anubis
ENSGALG00000012291	POLR2F	100	90.551	ENSPKIG00000002464	polr2f	100	90.551	Paramormyrops_kingsleyae
ENSGALG00000012291	POLR2F	56	100.000	ENSPSIG00000013913	POLR2F	100	100.000	Pelodiscus_sinensis
ENSGALG00000012291	POLR2F	100	90.551	ENSPMGG00000009619	polr2f	100	90.551	Periophthalmus_magnuspinnatus
ENSGALG00000012291	POLR2F	100	97.638	ENSPEMG00000008322	Polr2f	100	97.638	Peromyscus_maniculatus_bairdii
ENSGALG00000012291	POLR2F	100	97.638	ENSPCIG00000012000	-	100	97.638	Phascolarctos_cinereus
ENSGALG00000012291	POLR2F	100	88.976	ENSPFOG00000000139	polr2f	100	88.976	Poecilia_formosa
ENSGALG00000012291	POLR2F	100	88.976	ENSPLAG00000000988	polr2f	100	88.976	Poecilia_latipinna
ENSGALG00000012291	POLR2F	100	88.976	ENSPMEG00000019063	polr2f	100	88.976	Poecilia_mexicana
ENSGALG00000012291	POLR2F	77	88.776	ENSPREG00000016749	polr2f	100	88.776	Poecilia_reticulata
ENSGALG00000012291	POLR2F	100	97.638	ENSPPYG00000011809	POLR2F	100	97.638	Pongo_abelii
ENSGALG00000012291	POLR2F	100	97.638	ENSPCOG00000025716	POLR2F	100	97.638	Propithecus_coquereli
ENSGALG00000012291	POLR2F	79	96.000	ENSPVAG00000010107	POLR2F	64	96.000	Pteropus_vampyrus
ENSGALG00000012291	POLR2F	100	88.976	ENSPNYG00000019790	polr2f	100	88.976	Pundamilia_nyererei
ENSGALG00000012291	POLR2F	100	91.339	ENSPNAG00000009017	polr2f	100	91.339	Pygocentrus_nattereri
ENSGALG00000012291	POLR2F	100	96.850	ENSRNOG00000011214	Polr2f	100	96.850	Rattus_norvegicus
ENSGALG00000012291	POLR2F	100	97.638	ENSRBIG00000044878	POLR2F	100	97.638	Rhinopithecus_bieti
ENSGALG00000012291	POLR2F	100	97.638	ENSRROG00000019586	POLR2F	100	97.638	Rhinopithecus_roxellana
ENSGALG00000012291	POLR2F	65	72.289	YPR187W	RPO26	54	72.289	Saccharomyces_cerevisiae
ENSGALG00000012291	POLR2F	100	97.638	ENSSBOG00000023340	POLR2F	100	97.638	Saimiri_boliviensis_boliviensis
ENSGALG00000012291	POLR2F	100	97.638	ENSSHAG00000008502	POLR2F	100	97.638	Sarcophilus_harrisii
ENSGALG00000012291	POLR2F	100	89.764	ENSSFOG00015012810	polr2f	100	89.764	Scleropages_formosus
ENSGALG00000012291	POLR2F	100	89.764	ENSSMAG00000005354	polr2f	100	89.764	Scophthalmus_maximus
ENSGALG00000012291	POLR2F	100	90.551	ENSSDUG00000016273	polr2f	100	90.551	Seriola_dumerili
ENSGALG00000012291	POLR2F	100	90.551	ENSSLDG00000024895	polr2f	100	90.551	Seriola_lalandi_dorsalis
ENSGALG00000012291	POLR2F	100	98.425	ENSSPUG00000011343	POLR2F	100	98.425	Sphenodon_punctatus
ENSGALG00000012291	POLR2F	100	88.976	ENSSPAG00000019646	polr2f	100	88.976	Stegastes_partitus
ENSGALG00000012291	POLR2F	100	96.850	ENSSSCG00000000116	POLR2F	100	96.850	Sus_scrofa
ENSGALG00000012291	POLR2F	69	96.591	ENSTGUG00000016504	-	100	96.591	Taeniopygia_guttata
ENSGALG00000012291	POLR2F	100	97.638	ENSTGUG00000010476	POLR2F	93	97.638	Taeniopygia_guttata
ENSGALG00000012291	POLR2F	100	89.764	ENSTRUG00000021130	polr2f	71	89.764	Takifugu_rubripes
ENSGALG00000012291	POLR2F	100	90.551	ENSTNIG00000010827	polr2f	100	90.551	Tetraodon_nigroviridis
ENSGALG00000012291	POLR2F	79	96.000	ENSTTRG00000004817	POLR2F	64	96.000	Tursiops_truncatus
ENSGALG00000012291	POLR2F	100	96.850	ENSUAMG00000020504	POLR2F	100	96.850	Ursus_americanus
ENSGALG00000012291	POLR2F	100	96.850	ENSUMAG00000015052	POLR2F	100	96.850	Ursus_maritimus
ENSGALG00000012291	POLR2F	95	95.868	ENSVVUG00000024021	POLR2F	92	95.868	Vulpes_vulpes
ENSGALG00000012291	POLR2F	100	93.701	ENSXETG00000006346	polr2f	100	93.701	Xenopus_tropicalis
ENSGALG00000012291	POLR2F	100	88.976	ENSXCOG00000015983	polr2f	100	88.976	Xiphophorus_couchianus
ENSGALG00000012291	POLR2F	100	88.976	ENSXMAG00000001559	polr2f	100	88.976	Xiphophorus_maculatus