EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000012611 (Gene tree)
Gene ID: 418064
Gene Symbol: RTCB
Alias: C22orf28|FAAP|HSPC117
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 12674 bases
Position: chr1:53286579-53299252
Accession: 418064
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000020561	RtcB	PF01139.17	2.8e-145	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000020590	RTCB-201	2545	-	ENSGALP00000020561	505 (aa)	XP_416300	F1NYI3

Gene Model

Click here to download ENSGALG00000012611's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000012611's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000012611	RTCB	100	97.426	ENSG00000100220	RTCB	100	97.426	Homo_sapiens
ENSGALG00000012611	RTCB	100	94.257	ENSAPOG00000006040	rtcb	100	94.257	Acanthochromis_polyacanthus
ENSGALG00000012611	RTCB	100	97.228	ENSAMEG00000016152	RTCB	100	97.228	Ailuropoda_melanoleuca
ENSGALG00000012611	RTCB	100	89.901	ENSACIG00000009083	rtcb	100	89.901	Amphilophus_citrinellus
ENSGALG00000012611	RTCB	100	94.455	ENSAOCG00000005662	rtcb	100	95.217	Amphiprion_ocellaris
ENSGALG00000012611	RTCB	96	89.733	ENSAPEG00000024653	rtcb	100	89.733	Amphiprion_percula
ENSGALG00000012611	RTCB	100	94.455	ENSAPEG00000024701	rtcb	100	94.455	Amphiprion_percula
ENSGALG00000012611	RTCB	100	94.455	ENSATEG00000000618	rtcb	100	94.455	Anabas_testudineus
ENSGALG00000012611	RTCB	100	94.798	ENSACAG00000014817	RTCB	100	94.798	Anolis_carolinensis
ENSGALG00000012611	RTCB	72	94.444	ENSANAG00000023724	-	100	61.660	Aotus_nancymaae
ENSGALG00000012611	RTCB	100	81.584	ENSANAG00000018191	-	91	81.584	Aotus_nancymaae
ENSGALG00000012611	RTCB	100	92.871	ENSACLG00000008367	rtcb	100	93.913	Astatotilapia_calliptera
ENSGALG00000012611	RTCB	100	94.851	ENSAMXG00000042320	rtcb	100	94.851	Astyanax_mexicanus
ENSGALG00000012611	RTCB	100	97.426	ENSBTAG00000011070	RTCB	100	97.426	Bos_taurus
ENSGALG00000012611	RTCB	100	73.663	WBGene00008877	rtcb-1	100	73.663	Caenorhabditis_elegans
ENSGALG00000012611	RTCB	100	97.228	ENSCJAG00000006128	RTCB	100	97.228	Callithrix_jacchus
ENSGALG00000012611	RTCB	100	97.228	ENSCAFG00000001785	RTCB	100	97.228	Canis_familiaris
ENSGALG00000012611	RTCB	100	92.871	ENSCAFG00000010789	-	100	92.871	Canis_familiaris
ENSGALG00000012611	RTCB	87	93.409	ENSCAFG00020018953	-	99	93.409	Canis_lupus_dingo
ENSGALG00000012611	RTCB	100	97.228	ENSCAFG00020004890	-	100	97.228	Canis_lupus_dingo
ENSGALG00000012611	RTCB	100	97.426	ENSCHIG00000027009	-	100	97.426	Capra_hircus
ENSGALG00000012611	RTCB	100	97.426	ENSTSYG00000012320	RTCB	100	97.426	Carlito_syrichta
ENSGALG00000012611	RTCB	94	97.890	ENSCAPG00000011647	RTCB	96	97.890	Cavia_aperea
ENSGALG00000012611	RTCB	100	97.228	ENSCCAG00000000618	RTCB	100	97.228	Cebus_capucinus
ENSGALG00000012611	RTCB	100	97.228	ENSCATG00000033424	RTCB	100	97.228	Cercocebus_atys
ENSGALG00000012611	RTCB	100	97.228	ENSCLAG00000007997	RTCB	100	97.228	Chinchilla_lanigera
ENSGALG00000012611	RTCB	100	97.030	ENSCSAG00000008351	RTCB	100	97.030	Chlorocebus_sabaeus
ENSGALG00000012611	RTCB	100	82.772	ENSCHOG00000009123	RTCB	100	82.772	Choloepus_hoffmanni
ENSGALG00000012611	RTCB	100	98.218	ENSCPBG00000023184	RTCB	100	98.218	Chrysemys_picta_bellii
ENSGALG00000012611	RTCB	100	81.386	ENSCING00000003830	-	100	81.386	Ciona_intestinalis
ENSGALG00000012611	RTCB	100	81.782	ENSCSAVG00000008124	-	100	80.866	Ciona_savignyi
ENSGALG00000012611	RTCB	100	93.663	ENSCANG00000001891	RTCB	100	93.663	Colobus_angolensis_palliatus
ENSGALG00000012611	RTCB	100	97.426	ENSCGRG00001011173	Rtcb	100	97.426	Cricetulus_griseus_chok1gshd
ENSGALG00000012611	RTCB	96	95.501	ENSCGRG00000009587	-	100	95.501	Cricetulus_griseus_crigri
ENSGALG00000012611	RTCB	100	93.663	ENSCSEG00000003986	rtcb	100	93.663	Cynoglossus_semilaevis
ENSGALG00000012611	RTCB	82	93.510	ENSCVAG00000000569	rtcb	95	93.510	Cyprinodon_variegatus
ENSGALG00000012611	RTCB	100	94.653	ENSDARG00000101047	rtcb	100	94.653	Danio_rerio
ENSGALG00000012611	RTCB	80	94.103	ENSDNOG00000012425	RTCB	99	94.103	Dasypus_novemcinctus
ENSGALG00000012611	RTCB	100	97.030	ENSDORG00000010855	Rtcb	100	97.030	Dipodomys_ordii
ENSGALG00000012611	RTCB	99	85.885	FBgn0032781	RtcB	99	85.885	Drosophila_melanogaster
ENSGALG00000012611	RTCB	100	90.693	ENSETEG00000001988	RTCB	100	90.693	Echinops_telfairi
ENSGALG00000012611	RTCB	100	85.347	ENSEBUG00000014235	rtcb	100	85.347	Eptatretus_burgeri
ENSGALG00000012611	RTCB	100	97.624	ENSEASG00005019059	RTCB	100	97.624	Equus_asinus_asinus
ENSGALG00000012611	RTCB	100	97.624	ENSECAG00000023998	RTCB	100	97.624	Equus_caballus
ENSGALG00000012611	RTCB	88	89.013	ENSEEUG00000006251	RTCB	99	89.013	Erinaceus_europaeus
ENSGALG00000012611	RTCB	100	83.365	ENSELUG00000009275	rtcb	100	83.365	Esox_lucius
ENSGALG00000012611	RTCB	100	97.426	ENSFCAG00000026480	RTCB	100	97.426	Felis_catus
ENSGALG00000012611	RTCB	100	98.812	ENSFALG00000013334	RTCB	100	98.812	Ficedula_albicollis
ENSGALG00000012611	RTCB	100	97.228	ENSFDAG00000018150	RTCB	100	97.228	Fukomys_damarensis
ENSGALG00000012611	RTCB	100	94.059	ENSFHEG00000009595	rtcb	100	94.059	Fundulus_heteroclitus
ENSGALG00000012611	RTCB	100	92.277	ENSGMOG00000018882	rtcb	100	92.277	Gadus_morhua
ENSGALG00000012611	RTCB	100	94.059	ENSGAFG00000004198	rtcb	100	94.059	Gambusia_affinis
ENSGALG00000012611	RTCB	100	93.663	ENSGACG00000000586	rtcb	100	93.663	Gasterosteus_aculeatus
ENSGALG00000012611	RTCB	93	97.021	ENSGAGG00000019133	RTCB	98	97.021	Gopherus_agassizii
ENSGALG00000012611	RTCB	100	97.426	ENSGGOG00000011402	RTCB	100	97.426	Gorilla_gorilla
ENSGALG00000012611	RTCB	100	92.871	ENSHBUG00000020571	rtcb	100	92.871	Haplochromis_burtoni
ENSGALG00000012611	RTCB	93	69.510	ENSHGLG00000001066	-	99	69.510	Heterocephalus_glaber_female
ENSGALG00000012611	RTCB	100	97.228	ENSHGLG00000004492	RTCB	100	97.228	Heterocephalus_glaber_female
ENSGALG00000012611	RTCB	100	97.228	ENSHGLG00100008965	RTCB	100	97.228	Heterocephalus_glaber_male
ENSGALG00000012611	RTCB	100	92.505	ENSHCOG00000006450	rtcb	100	92.505	Hippocampus_comes
ENSGALG00000012611	RTCB	100	94.653	ENSIPUG00000015443	rtcb	100	94.653	Ictalurus_punctatus
ENSGALG00000012611	RTCB	100	97.228	ENSSTOG00000003878	RTCB	100	97.228	Ictidomys_tridecemlineatus
ENSGALG00000012611	RTCB	100	97.228	ENSJJAG00000010667	Rtcb	100	97.228	Jaculus_jaculus
ENSGALG00000012611	RTCB	100	94.059	ENSKMAG00000013178	rtcb	100	94.059	Kryptolebias_marmoratus
ENSGALG00000012611	RTCB	100	93.267	ENSLBEG00000000214	rtcb	100	93.267	Labrus_bergylta
ENSGALG00000012611	RTCB	100	94.257	ENSLBEG00000010566	RTCB	100	94.257	Labrus_bergylta
ENSGALG00000012611	RTCB	100	96.436	ENSLACG00000013033	RTCB	100	96.436	Latimeria_chalumnae
ENSGALG00000012611	RTCB	100	95.050	ENSLOCG00000016515	rtcb	99	95.050	Lepisosteus_oculatus
ENSGALG00000012611	RTCB	100	96.832	ENSLAFG00000002082	RTCB	100	96.832	Loxodonta_africana
ENSGALG00000012611	RTCB	100	97.030	ENSMFAG00000034419	RTCB	100	97.030	Macaca_fascicularis
ENSGALG00000012611	RTCB	100	97.030	ENSMMUG00000006720	RTCB	100	97.030	Macaca_mulatta
ENSGALG00000012611	RTCB	100	97.030	ENSMNEG00000040669	RTCB	100	97.030	Macaca_nemestrina
ENSGALG00000012611	RTCB	100	97.228	ENSMLEG00000040505	RTCB	100	97.228	Mandrillus_leucophaeus
ENSGALG00000012611	RTCB	100	94.653	ENSMAMG00000020676	rtcb	100	94.653	Mastacembelus_armatus
ENSGALG00000012611	RTCB	100	92.871	ENSMZEG00005018942	rtcb	100	92.871	Maylandia_zebra
ENSGALG00000012611	RTCB	100	99.606	ENSMGAG00000012805	RTCB	100	99.606	Meleagris_gallopavo
ENSGALG00000012611	RTCB	60	99.115	ENSMAUG00000008301	Rtcb	100	99.115	Mesocricetus_auratus
ENSGALG00000012611	RTCB	100	78.020	ENSMICG00000036677	-	100	78.020	Microcebus_murinus
ENSGALG00000012611	RTCB	100	97.228	ENSMICG00000013303	-	100	97.228	Microcebus_murinus
ENSGALG00000012611	RTCB	100	97.426	ENSMOCG00000002440	Rtcb	100	97.426	Microtus_ochrogaster
ENSGALG00000012611	RTCB	100	94.455	ENSMMOG00000005987	rtcb	100	94.455	Mola_mola
ENSGALG00000012611	RTCB	100	98.020	ENSMODG00000001414	RTCB	100	98.020	Monodelphis_domestica
ENSGALG00000012611	RTCB	100	94.257	ENSMALG00000007603	rtcb	100	94.257	Monopterus_albus
ENSGALG00000012611	RTCB	100	97.426	MGP_CAROLIEiJ_G0015689	Rtcb	100	97.426	Mus_caroli
ENSGALG00000012611	RTCB	100	97.426	ENSMUSG00000001783	Rtcb	100	97.426	Mus_musculus
ENSGALG00000012611	RTCB	100	97.426	MGP_PahariEiJ_G0031396	Rtcb	100	97.426	Mus_pahari
ENSGALG00000012611	RTCB	100	97.426	MGP_SPRETEiJ_G0016507	Rtcb	100	97.426	Mus_spretus
ENSGALG00000012611	RTCB	100	97.228	ENSMPUG00000012285	RTCB	100	97.228	Mustela_putorius_furo
ENSGALG00000012611	RTCB	100	94.477	ENSMLUG00000007803	RTCB	100	94.477	Myotis_lucifugus
ENSGALG00000012611	RTCB	72	98.667	ENSNGAG00000005093	Rtcb	100	98.667	Nannospalax_galili
ENSGALG00000012611	RTCB	100	93.069	ENSNBRG00000017202	rtcb	100	93.069	Neolamprologus_brichardi
ENSGALG00000012611	RTCB	100	97.426	ENSNLEG00000004960	RTCB	100	97.426	Nomascus_leucogenys
ENSGALG00000012611	RTCB	100	72.277	ENSMEUG00000007809	-	100	72.277	Notamacropus_eugenii
ENSGALG00000012611	RTCB	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSGALG00000012611	RTCB	100	64.158	ENSODEG00000005042	-	100	64.158	Octodon_degus
ENSGALG00000012611	RTCB	82	99.057	ENSODEG00000013033	-	100	99.057	Octodon_degus
ENSGALG00000012611	RTCB	100	94.059	ENSONIG00000007474	rtcb	100	94.059	Oreochromis_niloticus
ENSGALG00000012611	RTCB	100	97.624	ENSOANG00000005524	RTCB	100	97.624	Ornithorhynchus_anatinus
ENSGALG00000012611	RTCB	93	97.660	ENSOCUG00000008270	RTCB	96	97.660	Oryctolagus_cuniculus
ENSGALG00000012611	RTCB	100	93.663	ENSORLG00000020093	rtcb	100	93.663	Oryzias_latipes
ENSGALG00000012611	RTCB	100	93.663	ENSORLG00020003706	rtcb	100	93.663	Oryzias_latipes_hni
ENSGALG00000012611	RTCB	100	93.861	ENSORLG00015002968	rtcb	100	93.861	Oryzias_latipes_hsok
ENSGALG00000012611	RTCB	100	93.465	ENSOMEG00000021278	rtcb	100	93.465	Oryzias_melastigma
ENSGALG00000012611	RTCB	100	96.634	ENSOGAG00000001425	RTCB	100	96.634	Otolemur_garnettii
ENSGALG00000012611	RTCB	100	97.426	ENSOARG00000018008	RTCB	100	97.426	Ovis_aries
ENSGALG00000012611	RTCB	100	97.426	ENSPPAG00000028667	RTCB	100	97.426	Pan_paniscus
ENSGALG00000012611	RTCB	100	97.426	ENSPPRG00000004038	RTCB	100	97.426	Panthera_pardus
ENSGALG00000012611	RTCB	94	94.316	ENSPTIG00000020499	RTCB	97	94.316	Panthera_tigris_altaica
ENSGALG00000012611	RTCB	100	97.426	ENSPTRG00000014287	RTCB	100	97.426	Pan_troglodytes
ENSGALG00000012611	RTCB	100	97.030	ENSPANG00000016035	RTCB	100	97.030	Papio_anubis
ENSGALG00000012611	RTCB	100	93.465	ENSPKIG00000001881	rtcb	100	93.465	Paramormyrops_kingsleyae
ENSGALG00000012611	RTCB	91	98.913	ENSPSIG00000011690	RTCB	100	98.913	Pelodiscus_sinensis
ENSGALG00000012611	RTCB	100	94.653	ENSPMGG00000016672	rtcb	100	94.653	Periophthalmus_magnuspinnatus
ENSGALG00000012611	RTCB	100	97.426	ENSPEMG00000019548	Rtcb	100	97.426	Peromyscus_maniculatus_bairdii
ENSGALG00000012611	RTCB	100	91.485	ENSPMAG00000005657	rtcb	100	91.485	Petromyzon_marinus
ENSGALG00000012611	RTCB	100	97.624	ENSPCIG00000009467	RTCB	100	97.624	Phascolarctos_cinereus
ENSGALG00000012611	RTCB	100	94.455	ENSPFOG00000003058	rtcb	100	94.455	Poecilia_formosa
ENSGALG00000012611	RTCB	100	94.455	ENSPLAG00000017663	rtcb	100	94.455	Poecilia_latipinna
ENSGALG00000012611	RTCB	100	94.455	ENSPMEG00000006227	rtcb	100	94.455	Poecilia_mexicana
ENSGALG00000012611	RTCB	100	94.257	ENSPREG00000018467	rtcb	100	94.257	Poecilia_reticulata
ENSGALG00000012611	RTCB	100	97.426	ENSPPYG00000011752	RTCB	100	97.426	Pongo_abelii
ENSGALG00000012611	RTCB	93	80.085	ENSPCAG00000013641	RTCB	100	80.085	Procavia_capensis
ENSGALG00000012611	RTCB	100	97.228	ENSPCOG00000017243	RTCB	100	97.228	Propithecus_coquereli
ENSGALG00000012611	RTCB	93	96.383	ENSPVAG00000002380	RTCB	100	96.383	Pteropus_vampyrus
ENSGALG00000012611	RTCB	100	92.871	ENSPNYG00000022760	rtcb	100	92.871	Pundamilia_nyererei
ENSGALG00000012611	RTCB	100	94.653	ENSPNAG00000009209	rtcb	100	94.653	Pygocentrus_nattereri
ENSGALG00000012611	RTCB	100	97.426	ENSRNOG00000004813	Rtcb	100	97.426	Rattus_norvegicus
ENSGALG00000012611	RTCB	100	88.340	ENSRBIG00000042090	RTCB	100	88.340	Rhinopithecus_bieti
ENSGALG00000012611	RTCB	100	92.475	ENSSBOG00000020085	-	100	92.475	Saimiri_boliviensis_boliviensis
ENSGALG00000012611	RTCB	94	98.101	ENSSHAG00000016277	RTCB	100	98.101	Sarcophilus_harrisii
ENSGALG00000012611	RTCB	100	92.673	ENSSFOG00015000763	rtcb	100	92.673	Scleropages_formosus
ENSGALG00000012611	RTCB	100	93.663	ENSSFOG00015011572	RTCB	100	93.663	Scleropages_formosus
ENSGALG00000012611	RTCB	100	90.693	ENSSMAG00000005096	rtcb	100	90.693	Scophthalmus_maximus
ENSGALG00000012611	RTCB	100	94.059	ENSSDUG00000012605	rtcb	100	94.059	Seriola_dumerili
ENSGALG00000012611	RTCB	100	94.059	ENSSLDG00000019458	rtcb	100	94.059	Seriola_lalandi_dorsalis
ENSGALG00000012611	RTCB	66	97.143	ENSSARG00000004799	-	70	97.143	Sorex_araneus
ENSGALG00000012611	RTCB	100	97.822	ENSSPUG00000012814	RTCB	100	97.822	Sphenodon_punctatus
ENSGALG00000012611	RTCB	100	94.455	ENSSPAG00000004623	rtcb	100	94.455	Stegastes_partitus
ENSGALG00000012611	RTCB	100	97.426	ENSSSCG00000000158	RTCB	100	97.426	Sus_scrofa
ENSGALG00000012611	RTCB	100	98.812	ENSTGUG00000010947	RTCB	99	98.812	Taeniopygia_guttata
ENSGALG00000012611	RTCB	91	95.000	ENSTRUG00000009880	rtcb	100	95.000	Takifugu_rubripes
ENSGALG00000012611	RTCB	100	92.871	ENSTNIG00000002484	rtcb	100	92.871	Tetraodon_nigroviridis
ENSGALG00000012611	RTCB	100	84.554	ENSTBEG00000004418	RTCB	100	84.554	Tupaia_belangeri
ENSGALG00000012611	RTCB	93	97.021	ENSTTRG00000006417	RTCB	100	97.021	Tursiops_truncatus
ENSGALG00000012611	RTCB	100	97.228	ENSUAMG00000022792	RTCB	100	97.228	Ursus_americanus
ENSGALG00000012611	RTCB	100	97.228	ENSUMAG00000017225	RTCB	100	97.228	Ursus_maritimus
ENSGALG00000012611	RTCB	100	97.228	ENSVPAG00000005375	RTCB	100	97.228	Vicugna_pacos
ENSGALG00000012611	RTCB	100	97.228	ENSVVUG00000023408	RTCB	100	98.034	Vulpes_vulpes
ENSGALG00000012611	RTCB	100	95.248	ENSXETG00000011523	rtcb	100	95.248	Xenopus_tropicalis
ENSGALG00000012611	RTCB	100	94.059	ENSXMAG00000002855	rtcb	100	94.059	Xiphophorus_maculatus