EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000012619 (Gene tree)
Gene ID: 418065
Gene Symbol: PRDM4
Alias: PFM1
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 16816 bases
Position: chr1:53325209-53342024
Accession: 418065
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000020571	zf-C2H2	PF00096.26	1.1e-19	1	2
ENSGALP00000020571	zf-C2H2	PF00096.26	1.1e-19	2	2
ENSGALP00000020571	zf-met	PF12874.7	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000020600	PRDM4-201	2521	XM_416301	ENSGALP00000020571	801 (aa)	XP_416301	F1NYH0

Gene Model

Click here to download ENSGALG00000012619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000012619's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000012619	PRDM4	100	86.177	ENSG00000110851	PRDM4	100	93.333	Homo_sapiens
ENSGALG00000012619	PRDM4	100	86.443	ENSAMEG00000016174	PRDM4	100	86.692	Ailuropoda_melanoleuca
ENSGALG00000012619	PRDM4	99	95.113	ENSAPLG00000009846	PRDM4	99	95.113	Anas_platyrhynchos
ENSGALG00000012619	PRDM4	100	86.177	ENSANAG00000024800	PRDM4	100	86.800	Aotus_nancymaae
ENSGALG00000012619	PRDM4	100	86.800	ENSBTAG00000012999	PRDM4	100	87.298	Bos_taurus
ENSGALG00000012619	PRDM4	100	86.177	ENSCJAG00000015261	PRDM4	100	86.800	Callithrix_jacchus
ENSGALG00000012619	PRDM4	100	87.298	ENSCAFG00000001788	PRDM4	100	87.796	Canis_familiaris
ENSGALG00000012619	PRDM4	100	87.298	ENSCAFG00020004916	PRDM4	100	87.796	Canis_lupus_dingo
ENSGALG00000012619	PRDM4	100	86.675	ENSCHIG00000019409	PRDM4	100	87.173	Capra_hircus
ENSGALG00000012619	PRDM4	100	86.426	ENSTSYG00000009248	PRDM4	100	86.924	Carlito_syrichta
ENSGALG00000012619	PRDM4	99	83.396	ENSCAPG00000013937	PRDM4	99	83.521	Cavia_aperea
ENSGALG00000012619	PRDM4	99	82.776	ENSCPOG00000022385	PRDM4	100	82.900	Cavia_porcellus
ENSGALG00000012619	PRDM4	100	86.301	ENSCCAG00000036033	PRDM4	100	86.924	Cebus_capucinus
ENSGALG00000012619	PRDM4	100	86.052	ENSCATG00000044797	PRDM4	100	86.675	Cercocebus_atys
ENSGALG00000012619	PRDM4	99	83.871	ENSCLAG00000007545	PRDM4	100	84.491	Chinchilla_lanigera
ENSGALG00000012619	PRDM4	100	86.301	ENSCSAG00000002896	PRDM4	100	86.924	Chlorocebus_sabaeus
ENSGALG00000012619	PRDM4	71	91.818	ENSCHOG00000001744	PRDM4	83	91.818	Choloepus_hoffmanni
ENSGALG00000012619	PRDM4	99	91.468	ENSCPBG00000023187	PRDM4	100	91.468	Chrysemys_picta_bellii
ENSGALG00000012619	PRDM4	100	86.301	ENSCANG00000021804	PRDM4	100	86.924	Colobus_angolensis_palliatus
ENSGALG00000012619	PRDM4	99	85.075	ENSCGRG00001015102	-	100	85.075	Cricetulus_griseus_chok1gshd
ENSGALG00000012619	PRDM4	96	84.903	ENSCGRG00000004044	-	100	84.903	Cricetulus_griseus_crigri
ENSGALG00000012619	PRDM4	100	86.052	ENSDNOG00000032478	PRDM4	100	87.143	Dasypus_novemcinctus
ENSGALG00000012619	PRDM4	99	73.058	ENSDORG00000015081	-	100	73.308	Dipodomys_ordii
ENSGALG00000012619	PRDM4	94	45.694	ENSEBUG00000003775	prdm4	99	45.667	Eptatretus_burgeri
ENSGALG00000012619	PRDM4	100	86.675	ENSECAG00000015423	PRDM4	100	87.173	Equus_caballus
ENSGALG00000012619	PRDM4	94	84.021	ENSEEUG00000006569	PRDM4	99	84.021	Erinaceus_europaeus
ENSGALG00000012619	PRDM4	99	59.223	ENSELUG00000015265	prdm4	99	60.222	Esox_lucius
ENSGALG00000012619	PRDM4	100	86.800	ENSFCAG00000022478	PRDM4	100	87.298	Felis_catus
ENSGALG00000012619	PRDM4	99	94.862	ENSFALG00000013342	PRDM4	100	94.737	Ficedula_albicollis
ENSGALG00000012619	PRDM4	100	90.637	ENSGAGG00000002763	PRDM4	95	90.637	Gopherus_agassizii
ENSGALG00000012619	PRDM4	99	86.375	ENSGGOG00000001244	PRDM4	99	87.000	Gorilla_gorilla
ENSGALG00000012619	PRDM4	99	85.088	ENSHGLG00000004590	PRDM4	98	85.088	Heterocephalus_glaber_female
ENSGALG00000012619	PRDM4	99	84.119	ENSHGLG00100007464	PRDM4	100	84.119	Heterocephalus_glaber_male
ENSGALG00000012619	PRDM4	95	61.140	ENSIPUG00000024162	prdm4	94	61.140	Ictalurus_punctatus
ENSGALG00000012619	PRDM4	100	87.173	ENSSTOG00000016168	PRDM4	100	87.547	Ictidomys_tridecemlineatus
ENSGALG00000012619	PRDM4	79	86.792	ENSJJAG00000022448	-	94	84.783	Jaculus_jaculus
ENSGALG00000012619	PRDM4	99	72.963	ENSLACG00000007452	PRDM4	99	73.333	Latimeria_chalumnae
ENSGALG00000012619	PRDM4	78	42.147	ENSLOCG00000017092	prdm4	100	54.113	Lepisosteus_oculatus
ENSGALG00000012619	PRDM4	98	86.962	ENSLAFG00000001483	PRDM4	100	87.468	Loxodonta_africana
ENSGALG00000012619	PRDM4	100	86.426	ENSMFAG00000041862	PRDM4	100	87.049	Macaca_fascicularis
ENSGALG00000012619	PRDM4	100	86.426	ENSMMUG00000015550	PRDM4	100	87.049	Macaca_mulatta
ENSGALG00000012619	PRDM4	100	86.426	ENSMNEG00000032319	PRDM4	100	87.049	Macaca_nemestrina
ENSGALG00000012619	PRDM4	100	86.550	ENSMLEG00000039607	PRDM4	100	87.173	Mandrillus_leucophaeus
ENSGALG00000012619	PRDM4	99	89.599	ENSMGAG00000012815	PRDM4	100	89.599	Meleagris_gallopavo
ENSGALG00000012619	PRDM4	100	85.554	ENSMICG00000007807	PRDM4	100	86.052	Microcebus_murinus
ENSGALG00000012619	PRDM4	100	85.536	ENSMOCG00000000753	Prdm4	99	85.910	Microtus_ochrogaster
ENSGALG00000012619	PRDM4	99	86.341	ENSMUSG00000035529	Prdm4	100	86.466	Mus_musculus
ENSGALG00000012619	PRDM4	99	85.607	MGP_PahariEiJ_G0031398	Prdm4	100	86.108	Mus_pahari
ENSGALG00000012619	PRDM4	99	86.358	MGP_SPRETEiJ_G0016505	Prdm4	100	86.859	Mus_spretus
ENSGALG00000012619	PRDM4	100	80.917	ENSMPUG00000012238	PRDM4	100	80.970	Mustela_putorius_furo
ENSGALG00000012619	PRDM4	100	86.301	ENSMLUG00000000767	PRDM4	100	86.800	Myotis_lucifugus
ENSGALG00000012619	PRDM4	99	85.482	ENSNGAG00000018627	Prdm4	100	85.982	Nannospalax_galili
ENSGALG00000012619	PRDM4	100	86.301	ENSNLEG00000006748	PRDM4	100	86.924	Nomascus_leucogenys
ENSGALG00000012619	PRDM4	89	85.211	ENSMEUG00000004495	PRDM4	89	85.681	Notamacropus_eugenii
ENSGALG00000012619	PRDM4	88	86.607	ENSOPRG00000010192	PRDM4	89	87.500	Ochotona_princeps
ENSGALG00000012619	PRDM4	99	84.461	ENSODEG00000014750	PRDM4	99	84.962	Octodon_degus
ENSGALG00000012619	PRDM4	100	86.675	ENSOANG00000005526	PRDM4	100	86.800	Ornithorhynchus_anatinus
ENSGALG00000012619	PRDM4	94	87.874	ENSOCUG00000012859	PRDM4	96	87.874	Oryctolagus_cuniculus
ENSGALG00000012619	PRDM4	99	86.483	ENSOGAG00000011945	PRDM4	100	86.984	Otolemur_garnettii
ENSGALG00000012619	PRDM4	100	86.301	ENSOARG00000017955	PRDM4	100	86.800	Ovis_aries
ENSGALG00000012619	PRDM4	100	86.301	ENSPPAG00000038438	PRDM4	100	86.924	Pan_paniscus
ENSGALG00000012619	PRDM4	100	86.800	ENSPPRG00000004144	PRDM4	100	87.298	Panthera_pardus
ENSGALG00000012619	PRDM4	100	86.800	ENSPTIG00000005847	PRDM4	100	87.298	Panthera_tigris_altaica
ENSGALG00000012619	PRDM4	100	86.301	ENSPTRG00000005400	PRDM4	100	86.924	Pan_troglodytes
ENSGALG00000012619	PRDM4	100	86.426	ENSPANG00000022084	PRDM4	100	87.049	Papio_anubis
ENSGALG00000012619	PRDM4	99	58.768	ENSPKIG00000000875	prdm4	99	58.649	Paramormyrops_kingsleyae
ENSGALG00000012619	PRDM4	92	93.370	ENSPSIG00000012066	PRDM4	100	93.370	Pelodiscus_sinensis
ENSGALG00000012619	PRDM4	99	86.108	ENSPEMG00000014598	Prdm4	100	86.358	Peromyscus_maniculatus_bairdii
ENSGALG00000012619	PRDM4	100	84.615	ENSPCIG00000009471	PRDM4	100	84.864	Phascolarctos_cinereus
ENSGALG00000012619	PRDM4	100	86.052	ENSPPYG00000004913	PRDM4	100	86.675	Pongo_abelii
ENSGALG00000012619	PRDM4	83	89.583	ENSPCAG00000009987	PRDM4	83	89.583	Procavia_capensis
ENSGALG00000012619	PRDM4	100	85.554	ENSPCOG00000021060	PRDM4	100	86.052	Propithecus_coquereli
ENSGALG00000012619	PRDM4	100	85.821	ENSPVAG00000001596	PRDM4	100	86.443	Pteropus_vampyrus
ENSGALG00000012619	PRDM4	99	85.375	ENSRNOG00000004962	Prdm4	100	85.500	Rattus_norvegicus
ENSGALG00000012619	PRDM4	100	86.550	ENSRBIG00000035488	PRDM4	100	87.173	Rhinopithecus_bieti
ENSGALG00000012619	PRDM4	100	86.426	ENSRROG00000012779	PRDM4	100	87.049	Rhinopithecus_roxellana
ENSGALG00000012619	PRDM4	100	86.177	ENSSBOG00000000403	PRDM4	100	86.800	Saimiri_boliviensis_boliviensis
ENSGALG00000012619	PRDM4	99	62.776	ENSSFOG00015023358	prdm4	99	62.776	Scleropages_formosus
ENSGALG00000012619	PRDM4	100	86.675	ENSSSCG00000000160	PRDM4	100	87.173	Sus_scrofa
ENSGALG00000012619	PRDM4	99	95.244	ENSTGUG00000010962	-	99	95.119	Taeniopygia_guttata
ENSGALG00000012619	PRDM4	73	80.612	ENSTBEG00000001732	PRDM4	84	80.612	Tupaia_belangeri
ENSGALG00000012619	PRDM4	100	86.301	ENSTTRG00000011056	PRDM4	100	86.800	Tursiops_truncatus
ENSGALG00000012619	PRDM4	100	86.675	ENSUAMG00000022796	PRDM4	100	87.173	Ursus_americanus
ENSGALG00000012619	PRDM4	100	86.675	ENSUMAG00000017231	PRDM4	100	87.173	Ursus_maritimus
ENSGALG00000012619	PRDM4	99	86.984	ENSVPAG00000002215	PRDM4	100	87.359	Vicugna_pacos
ENSGALG00000012619	PRDM4	100	87.298	ENSVVUG00000023397	PRDM4	100	87.796	Vulpes_vulpes