EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000012799 (Gene tree)
Gene ID: 395920
Gene Symbol: RREB1
Alias: RREB-1
Full Name: Gallus gallus ras responsive element binding protein 1 (RREB1)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 120554 bases
Position: chr2:64646985-64767538
Accession: NM_205049
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000036443	zf-C2H2	PF00096.26	3.2e-42	1	6
ENSGALP00000036443	zf-C2H2	PF00096.26	3.2e-42	2	6
ENSGALP00000036443	zf-C2H2	PF00096.26	3.2e-42	3	6
ENSGALP00000036443	zf-C2H2	PF00096.26	3.2e-42	4	6
ENSGALP00000036443	zf-C2H2	PF00096.26	3.2e-42	5	6
ENSGALP00000036443	zf-C2H2	PF00096.26	3.2e-42	6	6
ENSGALP00000072888	zf-C2H2	PF00096.26	3.2e-42	1	6
ENSGALP00000072888	zf-C2H2	PF00096.26	3.2e-42	2	6
ENSGALP00000072888	zf-C2H2	PF00096.26	3.2e-42	3	6
ENSGALP00000072888	zf-C2H2	PF00096.26	3.2e-42	4	6
ENSGALP00000072888	zf-C2H2	PF00096.26	3.2e-42	5	6
ENSGALP00000072888	zf-C2H2	PF00096.26	3.2e-42	6	6
ENSGALP00000070464	zf-C2H2	PF00096.26	7.7e-42	1	5
ENSGALP00000070464	zf-C2H2	PF00096.26	7.7e-42	2	5
ENSGALP00000070464	zf-C2H2	PF00096.26	7.7e-42	3	5
ENSGALP00000070464	zf-C2H2	PF00096.26	7.7e-42	4	5
ENSGALP00000070464	zf-C2H2	PF00096.26	7.7e-42	5	5
ENSGALP00000036443	zf-met	PF12874.7	5.3e-12	1	1
ENSGALP00000072888	zf-met	PF12874.7	5.3e-12	1	1
ENSGALP00000070464	zf-met	PF12874.7	1.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000101729	-	6306	-	ENSGALP00000070464	1698 (aa)	XP_015131325	UPI000739C788
ENSGALT00000104785	-	6183	-	ENSGALP00000072888	1615 (aa)	XP_015131326	UPI0000ECCDA0
ENSGALT00000037239	-	5830	-	ENSGALP00000036443	1615 (aa)	XP_015131326	F1NTH5

Gene Model

Click here to download ENSGALG00000012799's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000012799's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000012799	RREB1	100	63.093	ENSG00000124782	RREB1	100	84.756	Homo_sapiens
ENSGALG00000012799	RREB1	100	94.063	ENSAPLG00000004726	RREB1	100	94.063	Anas_platyrhynchos
ENSGALG00000012799	RREB1	100	68.972	ENSACAG00000000520	RREB1	100	69.031	Anolis_carolinensis
ENSGALG00000012799	RREB1	100	60.981	ENSANAG00000029040	RREB1	100	67.008	Aotus_nancymaae
ENSGALG00000012799	RREB1	94	54.031	ENSAMXG00000019028	rreb1a	99	46.460	Astyanax_mexicanus
ENSGALG00000012799	RREB1	94	42.573	ENSAMXG00000015314	rreb1b	97	42.341	Astyanax_mexicanus
ENSGALG00000012799	RREB1	100	62.603	ENSCJAG00000021358	RREB1	100	66.667	Callithrix_jacchus
ENSGALG00000012799	RREB1	100	62.778	ENSCAFG00000009527	RREB1	100	68.346	Canis_familiaris
ENSGALG00000012799	RREB1	100	61.974	ENSCAFG00020013260	RREB1	100	62.733	Canis_lupus_dingo
ENSGALG00000012799	RREB1	100	62.763	ENSCCAG00000021905	RREB1	100	66.667	Cebus_capucinus
ENSGALG00000012799	RREB1	100	63.275	ENSCATG00000043662	RREB1	100	67.553	Cercocebus_atys
ENSGALG00000012799	RREB1	100	61.054	ENSCSAG00000007376	RREB1	100	60.796	Chlorocebus_sabaeus
ENSGALG00000012799	RREB1	100	84.104	ENSCPBG00000008709	RREB1	100	83.734	Chrysemys_picta_bellii
ENSGALG00000012799	RREB1	100	63.043	ENSCANG00000032835	RREB1	100	67.737	Colobus_angolensis_palliatus
ENSGALG00000012799	RREB1	91	49.020	ENSCSEG00000018342	rreb1a	93	49.020	Cynoglossus_semilaevis
ENSGALG00000012799	RREB1	100	44.393	ENSDARG00000063701	rreb1a	97	59.135	Danio_rerio
ENSGALG00000012799	RREB1	100	61.395	ENSDORG00000006979	Rreb1	99	66.745	Dipodomys_ordii
ENSGALG00000012799	RREB1	100	63.721	ENSEASG00005012054	RREB1	100	63.395	Equus_asinus_asinus
ENSGALG00000012799	RREB1	100	62.826	ENSECAG00000018169	RREB1	100	63.222	Equus_caballus
ENSGALG00000012799	RREB1	100	88.930	ENSFALG00000013231	RREB1	99	88.402	Ficedula_albicollis
ENSGALG00000012799	RREB1	95	53.947	ENSFDAG00000004213	RREB1	96	54.075	Fukomys_damarensis
ENSGALG00000012799	RREB1	97	82.710	ENSGAGG00000002213	RREB1	100	82.310	Gopherus_agassizii
ENSGALG00000012799	RREB1	100	63.402	ENSGGOG00000004561	RREB1	100	67.633	Gorilla_gorilla
ENSGALG00000012799	RREB1	80	45.000	ENSLBEG00000013512	rreb1a	99	45.309	Labrus_bergylta
ENSGALG00000012799	RREB1	92	60.333	ENSLACG00000009283	RREB1	99	59.612	Latimeria_chalumnae
ENSGALG00000012799	RREB1	91	54.105	ENSLOCG00000011702	rreb1b	99	52.869	Lepisosteus_oculatus
ENSGALG00000012799	RREB1	100	62.837	ENSLAFG00000005300	RREB1	100	62.565	Loxodonta_africana
ENSGALG00000012799	RREB1	100	63.084	ENSMFAG00000000389	RREB1	100	67.318	Macaca_fascicularis
ENSGALG00000012799	RREB1	100	63.084	ENSMMUG00000007852	RREB1	100	67.240	Macaca_mulatta
ENSGALG00000012799	RREB1	100	63.011	ENSMNEG00000038556	RREB1	100	67.318	Macaca_nemestrina
ENSGALG00000012799	RREB1	100	63.158	ENSMLEG00000040965	RREB1	100	67.475	Mandrillus_leucophaeus
ENSGALG00000012799	RREB1	100	98.080	ENSMGAG00000003910	RREB1	100	98.080	Meleagris_gallopavo
ENSGALG00000012799	RREB1	100	62.148	ENSMICG00000003683	RREB1	100	66.903	Microcebus_murinus
ENSGALG00000012799	RREB1	100	68.007	ENSMODG00000009892	RREB1	100	67.634	Monodelphis_domestica
ENSGALG00000012799	RREB1	100	61.095	ENSMPUG00000000558	RREB1	100	60.615	Mustela_putorius_furo
ENSGALG00000012799	RREB1	100	62.288	ENSMLUG00000013153	RREB1	100	62.806	Myotis_lucifugus
ENSGALG00000012799	RREB1	100	62.340	ENSNGAG00000021506	Rreb1	100	62.312	Nannospalax_galili
ENSGALG00000012799	RREB1	64	57.303	ENSNBRG00000016744	rreb1a	92	55.102	Neolamprologus_brichardi
ENSGALG00000012799	RREB1	100	61.785	ENSNLEG00000011554	RREB1	100	67.110	Nomascus_leucogenys
ENSGALG00000012799	RREB1	100	68.908	ENSMEUG00000015377	RREB1	99	68.603	Notamacropus_eugenii
ENSGALG00000012799	RREB1	95	57.213	ENSOPRG00000001966	RREB1	94	57.134	Ochotona_princeps
ENSGALG00000012799	RREB1	100	59.988	ENSODEG00000007124	RREB1	100	59.123	Octodon_degus
ENSGALG00000012799	RREB1	97	50.980	ENSOMEG00000001389	rreb1a	100	50.980	Oryzias_melastigma
ENSGALG00000012799	RREB1	100	56.527	ENSOGAG00000025755	RREB1	100	56.340	Otolemur_garnettii
ENSGALG00000012799	RREB1	100	63.093	ENSPPAG00000037017	RREB1	100	67.189	Pan_paniscus
ENSGALG00000012799	RREB1	100	63.658	ENSPPRG00000012144	RREB1	100	63.225	Panthera_pardus
ENSGALG00000012799	RREB1	100	63.093	ENSPTRG00000017697	RREB1	100	67.189	Pan_troglodytes
ENSGALG00000012799	RREB1	100	63.216	ENSPANG00000019553	RREB1	100	67.396	Papio_anubis
ENSGALG00000012799	RREB1	99	47.790	ENSPKIG00000006372	rreb1b	99	48.088	Paramormyrops_kingsleyae
ENSGALG00000012799	RREB1	100	83.549	ENSPSIG00000006582	RREB1	100	83.118	Pelodiscus_sinensis
ENSGALG00000012799	RREB1	100	61.404	ENSPEMG00000014153	Rreb1	100	61.377	Peromyscus_maniculatus_bairdii
ENSGALG00000012799	RREB1	97	69.741	ENSPCIG00000012644	RREB1	99	70.114	Phascolarctos_cinereus
ENSGALG00000012799	RREB1	100	61.190	ENSPPYG00000016204	RREB1	100	60.638	Pongo_abelii
ENSGALG00000012799	RREB1	100	62.876	ENSPCOG00000014821	RREB1	100	67.243	Propithecus_coquereli
ENSGALG00000012799	RREB1	100	62.002	ENSPVAG00000014081	RREB1	100	61.318	Pteropus_vampyrus
ENSGALG00000012799	RREB1	83	50.081	ENSPNAG00000000486	rreb1a	71	48.268	Pygocentrus_nattereri
ENSGALG00000012799	RREB1	100	61.095	ENSRNOG00000015701	Rreb1	100	60.624	Rattus_norvegicus
ENSGALG00000012799	RREB1	100	63.306	ENSRROG00000039603	RREB1	100	67.894	Rhinopithecus_roxellana
ENSGALG00000012799	RREB1	100	63.035	ENSSBOG00000025257	RREB1	100	67.057	Saimiri_boliviensis_boliviensis
ENSGALG00000012799	RREB1	100	69.431	ENSSHAG00000005295	RREB1	100	74.160	Sarcophilus_harrisii
ENSGALG00000012799	RREB1	92	48.389	ENSSFOG00015001117	rreb1b	94	48.436	Scleropages_formosus
ENSGALG00000012799	RREB1	100	78.202	ENSSPUG00000007686	RREB1	100	77.771	Sphenodon_punctatus
ENSGALG00000012799	RREB1	100	89.487	ENSTGUG00000002309	RREB1	100	90.666	Taeniopygia_guttata
ENSGALG00000012799	RREB1	100	62.181	ENSUAMG00000003741	RREB1	99	63.463	Ursus_americanus
ENSGALG00000012799	RREB1	100	67.752	ENSVVUG00000005050	RREB1	95	68.135	Vulpes_vulpes
ENSGALG00000012799	RREB1	94	64.370	ENSXETG00000015435	rreb1	99	63.168	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding	21873635.	IBA	Function
GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	21873635.	IBA	Function
GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	21873635.	IBA	Function
GO:0003700	DNA-binding transcription factor activity	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0045944	positive regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function