EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000013005 (Gene tree)
Gene ID: 420925
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 4825 bases
Position: chr2:78256607-78261431
Accession: 21368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000021206	zf-U11-48K	PF05253.12	3.2e-08	1	1
ENSGALP00000045019	zf-U11-48K	PF05253.12	3.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000071731	SNRNP48-201	921	-	ENSGALP00000045019	306 (aa)	-	A0A1D5NXC4
ENSGALT00000021237	SNRNP48-202	898	-	ENSGALP00000021206	296 (aa)	-	F1NJQ4

Gene Model

Click here to download ENSGALG00000013005's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000013005's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000013005	SNRNP48	82	68.571	ENSG00000168566	SNRNP48	78	67.148	Homo_sapiens
ENSGALG00000013005	SNRNP48	77	56.596	ENSAPOG00000021430	snrnp48	78	51.825	Acanthochromis_polyacanthus
ENSGALG00000013005	SNRNP48	89	66.418	ENSAMEG00000017349	SNRNP48	83	63.574	Ailuropoda_melanoleuca
ENSGALG00000013005	SNRNP48	90	50.566	ENSACIG00000002032	snrnp48	75	49.808	Amphilophus_citrinellus
ENSGALG00000013005	SNRNP48	77	55.745	ENSAOCG00000010562	snrnp48	76	52.471	Amphiprion_ocellaris
ENSGALG00000013005	SNRNP48	77	55.319	ENSAPEG00000003231	snrnp48	76	51.880	Amphiprion_percula
ENSGALG00000013005	SNRNP48	70	57.416	ENSATEG00000020210	snrnp48	86	49.495	Anabas_testudineus
ENSGALG00000013005	SNRNP48	95	69.580	ENSACAG00000002811	SNRNP48	88	69.580	Anolis_carolinensis
ENSGALG00000013005	SNRNP48	82	68.163	ENSANAG00000033538	SNRNP48	78	66.787	Aotus_nancymaae
ENSGALG00000013005	SNRNP48	93	50.542	ENSAMXG00000015309	snrnp48	86	49.653	Astyanax_mexicanus
ENSGALG00000013005	SNRNP48	90	66.165	ENSBTAG00000001123	SNRNP48	82	62.718	Bos_taurus
ENSGALG00000013005	SNRNP48	82	68.980	ENSCJAG00000021330	SNRNP48	78	67.509	Callithrix_jacchus
ENSGALG00000013005	SNRNP48	89	67.300	ENSCAFG00000009574	SNRNP48	68	63.763	Canis_familiaris
ENSGALG00000013005	SNRNP48	89	67.300	ENSCAFG00020013203	SNRNP48	82	63.763	Canis_lupus_dingo
ENSGALG00000013005	SNRNP48	90	66.667	ENSCHIG00000015216	SNRNP48	82	63.194	Capra_hircus
ENSGALG00000013005	SNRNP48	83	67.755	ENSTSYG00000000698	SNRNP48	77	67.159	Carlito_syrichta
ENSGALG00000013005	SNRNP48	92	70.111	ENSCAPG00000006768	SNRNP48	85	70.111	Cavia_aperea
ENSGALG00000013005	SNRNP48	90	70.037	ENSCPOG00000007910	SNRNP48	77	69.742	Cavia_porcellus
ENSGALG00000013005	SNRNP48	82	68.163	ENSCCAG00000035652	SNRNP48	78	66.787	Cebus_capucinus
ENSGALG00000013005	SNRNP48	86	68.482	ENSCATG00000033947	SNRNP48	78	66.787	Cercocebus_atys
ENSGALG00000013005	SNRNP48	82	70.370	ENSCLAG00000003765	SNRNP48	77	69.373	Chinchilla_lanigera
ENSGALG00000013005	SNRNP48	85	67.984	ENSCSAG00000007409	SNRNP48	78	67.148	Chlorocebus_sabaeus
ENSGALG00000013005	SNRNP48	96	77.163	ENSCPBG00000019146	SNRNP48	90	77.163	Chrysemys_picta_bellii
ENSGALG00000013005	SNRNP48	86	32.955	ENSCING00000004121	-	79	32.955	Ciona_intestinalis
ENSGALG00000013005	SNRNP48	82	68.163	ENSCANG00000030017	SNRNP48	78	66.787	Colobus_angolensis_palliatus
ENSGALG00000013005	SNRNP48	92	65.568	ENSCGRG00001001076	-	78	65.568	Cricetulus_griseus_chok1gshd
ENSGALG00000013005	SNRNP48	91	55.556	ENSCGRG00001008805	-	79	55.678	Cricetulus_griseus_chok1gshd
ENSGALG00000013005	SNRNP48	92	65.568	ENSCGRG00000007781	Snrnp48	78	65.568	Cricetulus_griseus_crigri
ENSGALG00000013005	SNRNP48	69	55.288	ENSCSEG00000000722	snrnp48	81	48.443	Cynoglossus_semilaevis
ENSGALG00000013005	SNRNP48	90	51.301	ENSCVAG00000019829	snrnp48	68	51.111	Cyprinodon_variegatus
ENSGALG00000013005	SNRNP48	81	50.826	ENSDARG00000039989	snrnp48	77	50.187	Danio_rerio
ENSGALG00000013005	SNRNP48	85	65.613	ENSDNOG00000014978	SNRNP48	78	64.982	Dasypus_novemcinctus
ENSGALG00000013005	SNRNP48	93	65.091	ENSDORG00000015140	Snrnp48	78	65.091	Dipodomys_ordii
ENSGALG00000013005	SNRNP48	85	65.737	ENSEASG00005012021	SNRNP48	82	62.718	Equus_asinus_asinus
ENSGALG00000013005	SNRNP48	85	65.737	ENSECAG00000026937	SNRNP48	82	62.718	Equus_caballus
ENSGALG00000013005	SNRNP48	92	46.886	ENSEEUG00000015437	SNRNP48	81	45.804	Erinaceus_europaeus
ENSGALG00000013005	SNRNP48	88	53.053	ENSELUG00000009766	snrnp48	71	53.053	Esox_lucius
ENSGALG00000013005	SNRNP48	83	67.206	ENSFCAG00000018853	SNRNP48	77	66.421	Felis_catus
ENSGALG00000013005	SNRNP48	86	93.359	ENSFALG00000007797	SNRNP48	89	91.039	Ficedula_albicollis
ENSGALG00000013005	SNRNP48	92	67.897	ENSFDAG00000009231	SNRNP48	77	67.897	Fukomys_damarensis
ENSGALG00000013005	SNRNP48	68	58.621	ENSFHEG00000014647	snrnp48	96	51.601	Fundulus_heteroclitus
ENSGALG00000013005	SNRNP48	67	57.711	ENSGMOG00000018599	-	87	48.905	Gadus_morhua
ENSGALG00000013005	SNRNP48	68	58.537	ENSGAFG00000021639	snrnp48	77	51.119	Gambusia_affinis
ENSGALG00000013005	SNRNP48	67	57.426	ENSGACG00000017756	-	80	52.920	Gasterosteus_aculeatus
ENSGALG00000013005	SNRNP48	96	75.433	ENSGAGG00000000865	SNRNP48	93	75.433	Gopherus_agassizii
ENSGALG00000013005	SNRNP48	82	68.571	ENSGGOG00000013220	SNRNP48	78	67.148	Gorilla_gorilla
ENSGALG00000013005	SNRNP48	68	59.606	ENSHBUG00000017066	snrnp48	75	53.030	Haplochromis_burtoni
ENSGALG00000013005	SNRNP48	83	69.512	ENSHGLG00000015241	SNRNP48	77	68.266	Heterocephalus_glaber_female
ENSGALG00000013005	SNRNP48	83	69.512	ENSHGLG00100010027	SNRNP48	77	68.266	Heterocephalus_glaber_male
ENSGALG00000013005	SNRNP48	67	56.436	ENSHCOG00000014066	snrnp48	76	50.186	Hippocampus_comes
ENSGALG00000013005	SNRNP48	85	67.984	ENSSTOG00000014635	SNRNP48	78	67.636	Ictidomys_tridecemlineatus
ENSGALG00000013005	SNRNP48	85	65.339	ENSJJAG00000011495	Snrnp48	78	64.727	Jaculus_jaculus
ENSGALG00000013005	SNRNP48	67	56.436	ENSKMAG00000016514	snrnp48	76	50.190	Kryptolebias_marmoratus
ENSGALG00000013005	SNRNP48	68	58.049	ENSLBEG00000026249	snrnp48	76	51.321	Labrus_bergylta
ENSGALG00000013005	SNRNP48	91	60.650	ENSLACG00000003958	SNRNP48	80	60.650	Latimeria_chalumnae
ENSGALG00000013005	SNRNP48	82	59.109	ENSLOCG00000004187	snrnp48	77	58.209	Lepisosteus_oculatus
ENSGALG00000013005	SNRNP48	82	65.844	ENSLAFG00000011152	SNRNP48	78	64.364	Loxodonta_africana
ENSGALG00000013005	SNRNP48	82	68.571	ENSMFAG00000045216	SNRNP48	78	67.148	Macaca_fascicularis
ENSGALG00000013005	SNRNP48	82	68.571	ENSMMUG00000014785	SNRNP48	78	67.148	Macaca_mulatta
ENSGALG00000013005	SNRNP48	82	68.571	ENSMNEG00000042269	SNRNP48	78	67.148	Macaca_nemestrina
ENSGALG00000013005	SNRNP48	82	68.571	ENSMLEG00000034004	SNRNP48	78	67.148	Mandrillus_leucophaeus
ENSGALG00000013005	SNRNP48	68	56.585	ENSMAMG00000018673	snrnp48	66	50.929	Mastacembelus_armatus
ENSGALG00000013005	SNRNP48	90	95.911	ENSMGAG00000006037	SNRNP48	91	95.911	Meleagris_gallopavo
ENSGALG00000013005	SNRNP48	92	65.201	ENSMAUG00000011944	Snrnp48	78	65.201	Mesocricetus_auratus
ENSGALG00000013005	SNRNP48	82	67.490	ENSMICG00000012497	SNRNP48	78	66.182	Microcebus_murinus
ENSGALG00000013005	SNRNP48	90	66.415	ENSMOCG00000015555	Snrnp48	76	66.415	Microtus_ochrogaster
ENSGALG00000013005	SNRNP48	66	55.330	ENSMMOG00000003072	-	61	55.330	Mola_mola
ENSGALG00000013005	SNRNP48	84	73.307	ENSMODG00000009996	SNRNP48	74	72.628	Monodelphis_domestica
ENSGALG00000013005	SNRNP48	69	57.767	ENSMALG00000005725	snrnp48	77	51.311	Monopterus_albus
ENSGALG00000013005	SNRNP48	92	64.469	MGP_CAROLIEiJ_G0018441	Snrnp48	78	64.469	Mus_caroli
ENSGALG00000013005	SNRNP48	90	64.906	ENSMUSG00000021431	Snrnp48	76	64.906	Mus_musculus
ENSGALG00000013005	SNRNP48	90	66.415	MGP_PahariEiJ_G0019509	Snrnp48	76	66.415	Mus_pahari
ENSGALG00000013005	SNRNP48	90	65.283	MGP_SPRETEiJ_G0019321	Snrnp48	76	65.283	Mus_spretus
ENSGALG00000013005	SNRNP48	92	66.176	ENSNGAG00000004849	Snrnp48	77	66.176	Nannospalax_galili
ENSGALG00000013005	SNRNP48	88	52.273	ENSNBRG00000012127	snrnp48	75	53.030	Neolamprologus_brichardi
ENSGALG00000013005	SNRNP48	82	68.571	ENSNLEG00000011667	SNRNP48	78	67.148	Nomascus_leucogenys
ENSGALG00000013005	SNRNP48	92	65.314	ENSOPRG00000015471	SNRNP48	81	65.683	Ochotona_princeps
ENSGALG00000013005	SNRNP48	88	51.515	ENSONIG00000001520	snrnp48	75	52.652	Oreochromis_niloticus
ENSGALG00000013005	SNRNP48	83	69.796	ENSOCUG00000005168	SNRNP48	83	68.821	Oryctolagus_cuniculus
ENSGALG00000013005	SNRNP48	86	54.264	ENSORLG00000015654	snrnp48	75	53.933	Oryzias_latipes
ENSGALG00000013005	SNRNP48	86	53.101	ENSORLG00020015976	snrnp48	64	53.184	Oryzias_latipes_hni
ENSGALG00000013005	SNRNP48	86	54.264	ENSORLG00015022379	snrnp48	64	54.307	Oryzias_latipes_hsok
ENSGALG00000013005	SNRNP48	85	55.906	ENSOMEG00000022007	snrnp48	75	55.431	Oryzias_melastigma
ENSGALG00000013005	SNRNP48	93	64.388	ENSOGAG00000005275	SNRNP48	81	64.413	Otolemur_garnettii
ENSGALG00000013005	SNRNP48	90	67.041	ENSOARG00000017319	SNRNP48	90	67.041	Ovis_aries
ENSGALG00000013005	SNRNP48	82	68.571	ENSPPAG00000032873	SNRNP48	78	67.148	Pan_paniscus
ENSGALG00000013005	SNRNP48	85	66.798	ENSPPRG00000004283	SNRNP48	82	63.668	Panthera_pardus
ENSGALG00000013005	SNRNP48	83	67.206	ENSPTIG00000013502	SNRNP48	91	66.421	Panthera_tigris_altaica
ENSGALG00000013005	SNRNP48	82	68.571	ENSPTRG00000017703	SNRNP48	78	67.148	Pan_troglodytes
ENSGALG00000013005	SNRNP48	82	68.571	ENSPANG00000000771	SNRNP48	78	67.148	Papio_anubis
ENSGALG00000013005	SNRNP48	83	54.183	ENSPKIG00000013703	snrnp48	53	54.183	Paramormyrops_kingsleyae
ENSGALG00000013005	SNRNP48	93	75.714	ENSPSIG00000002213	SNRNP48	91	76.632	Pelodiscus_sinensis
ENSGALG00000013005	SNRNP48	70	54.762	ENSPMGG00000008120	snrnp48	73	54.762	Periophthalmus_magnuspinnatus
ENSGALG00000013005	SNRNP48	90	66.792	ENSPEMG00000008872	Snrnp48	76	66.792	Peromyscus_maniculatus_bairdii
ENSGALG00000013005	SNRNP48	68	58.049	ENSPFOG00000003578	snrnp48	77	51.119	Poecilia_formosa
ENSGALG00000013005	SNRNP48	61	57.297	ENSPLAG00000002290	snrnp48	63	57.297	Poecilia_latipinna
ENSGALG00000013005	SNRNP48	68	59.024	ENSPMEG00000018033	snrnp48	77	51.866	Poecilia_mexicana
ENSGALG00000013005	SNRNP48	67	58.911	ENSPREG00000018541	snrnp48	77	52.381	Poecilia_reticulata
ENSGALG00000013005	SNRNP48	82	67.347	ENSPPYG00000016209	SNRNP48	78	66.065	Pongo_abelii
ENSGALG00000013005	SNRNP48	68	52.970	ENSPCAG00000011991	SNRNP48	78	52.857	Procavia_capensis
ENSGALG00000013005	SNRNP48	82	67.623	ENSPVAG00000002854	SNRNP48	82	63.542	Pteropus_vampyrus
ENSGALG00000013005	SNRNP48	88	52.273	ENSPNYG00000015399	snrnp48	83	53.030	Pundamilia_nyererei
ENSGALG00000013005	SNRNP48	93	65.217	ENSRNOG00000013756	Snrnp48	79	65.217	Rattus_norvegicus
ENSGALG00000013005	SNRNP48	90	67.910	ENSRBIG00000043856	SNRNP48	83	67.647	Rhinopithecus_bieti
ENSGALG00000013005	SNRNP48	82	68.163	ENSRROG00000043229	SNRNP48	78	66.787	Rhinopithecus_roxellana
ENSGALG00000013005	SNRNP48	82	68.571	ENSSBOG00000019486	SNRNP48	78	67.148	Saimiri_boliviensis_boliviensis
ENSGALG00000013005	SNRNP48	84	72.510	ENSSHAG00000014483	SNRNP48	78	72.426	Sarcophilus_harrisii
ENSGALG00000013005	SNRNP48	68	59.113	ENSSFOG00015006610	snrnp48	62	54.244	Scleropages_formosus
ENSGALG00000013005	SNRNP48	90	53.532	ENSSDUG00000014953	snrnp48	76	54.074	Seriola_dumerili
ENSGALG00000013005	SNRNP48	90	53.532	ENSSLDG00000005989	snrnp48	76	54.074	Seriola_lalandi_dorsalis
ENSGALG00000013005	SNRNP48	94	72.598	ENSSPUG00000006257	SNRNP48	81	72.982	Sphenodon_punctatus
ENSGALG00000013005	SNRNP48	77	55.172	ENSSPAG00000006454	snrnp48	76	51.852	Stegastes_partitus
ENSGALG00000013005	SNRNP48	93	88.448	ENSTGUG00000007575	SNRNP48	91	87.676	Taeniopygia_guttata
ENSGALG00000013005	SNRNP48	67	56.436	ENSTRUG00000007031	snrnp48	80	48.043	Takifugu_rubripes
ENSGALG00000013005	SNRNP48	89	47.273	ENSTNIG00000012977	-	78	49.084	Tetraodon_nigroviridis
ENSGALG00000013005	SNRNP48	71	69.524	ENSTBEG00000015620	SNRNP48	62	69.524	Tupaia_belangeri
ENSGALG00000013005	SNRNP48	90	66.917	ENSTTRG00000016715	SNRNP48	82	63.636	Tursiops_truncatus
ENSGALG00000013005	SNRNP48	89	66.038	ENSUAMG00000003690	SNRNP48	82	63.194	Ursus_americanus
ENSGALG00000013005	SNRNP48	91	67.037	ENSVPAG00000003557	SNRNP48	91	67.037	Vicugna_pacos
ENSGALG00000013005	SNRNP48	89	66.792	ENSVVUG00000004996	SNRNP48	82	63.322	Vulpes_vulpes
ENSGALG00000013005	SNRNP48	86	57.977	ENSXETG00000020447	snrnp48	78	57.090	Xenopus_tropicalis
ENSGALG00000013005	SNRNP48	62	58.602	ENSXCOG00000004478	snrnp48	56	58.602	Xiphophorus_couchianus
ENSGALG00000013005	SNRNP48	68	59.024	ENSXMAG00000013595	snrnp48	77	51.493	Xiphophorus_maculatus