EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000013155 (Gene tree)
Gene ID: 420965
Gene Symbol: -
Alias: -
Full Name: poly(rC) binding protein 2
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 176753 bases
Position: chr2:85442153-85618905
Accession: 420965
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000065318	KH_1	PF00013.29	2.1e-55	1	3
ENSGALP00000065318	KH_1	PF00013.29	2.1e-55	2	3
ENSGALP00000065318	KH_1	PF00013.29	2.1e-55	3	3
ENSGALP00000073730	KH_1	PF00013.29	2.1e-55	1	3
ENSGALP00000073730	KH_1	PF00013.29	2.1e-55	2	3
ENSGALP00000073730	KH_1	PF00013.29	2.1e-55	3	3
ENSGALP00000021453	KH_1	PF00013.29	2.2e-55	1	3
ENSGALP00000021453	KH_1	PF00013.29	2.2e-55	2	3
ENSGALP00000021453	KH_1	PF00013.29	2.2e-55	3	3
ENSGALP00000071042	KH_1	PF00013.29	2.5e-55	1	3
ENSGALP00000071042	KH_1	PF00013.29	2.5e-55	2	3
ENSGALP00000071042	KH_1	PF00013.29	2.5e-55	3	3
ENSGALP00000066754	KH_1	PF00013.29	1.5e-51	1	3
ENSGALP00000066754	KH_1	PF00013.29	1.5e-51	2	3
ENSGALP00000066754	KH_1	PF00013.29	1.5e-51	3	3
ENSGALP00000065318	KH_2	PF07650.17	2.4e-16	1	1
ENSGALP00000073730	KH_2	PF07650.17	2.4e-16	1	1
ENSGALP00000021453	KH_2	PF07650.17	2.5e-16	1	1
ENSGALP00000071042	KH_2	PF07650.17	2.7e-16	1	1
ENSGALP00000066754	KH_2	PF07650.17	5.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000021485	-	2112	-	ENSGALP00000021453	357 (aa)	XP_025003541	F1NPL2
ENSGALT00000096705	-	978	-	ENSGALP00000066754	325 (aa)	-	-
ENSGALT00000097595	-	1343	-	ENSGALP00000065318	352 (aa)	XP_025003542	UPI0002C870E5
ENSGALT00000099833	-	3226	XM_025147775	ENSGALP00000073730	352 (aa)	XP_025003542	UPI0002C870E5
ENSGALT00000103705	-	2759	-	ENSGALP00000071042	364 (aa)	XP_025003539	UPI000350530A

Gene Model

Click here to download ENSGALG00000013155's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000013155's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000013155	-	99	81.734	ENSAPOG00000020003	pcbp3	86	81.734	Acanthochromis_polyacanthus
ENSGALG00000013155	-	99	81.627	ENSAPOG00000016582	-	97	81.627	Acanthochromis_polyacanthus
ENSGALG00000013155	-	99	81.924	ENSAMEG00000001697	-	99	83.429	Ailuropoda_melanoleuca
ENSGALG00000013155	-	99	81.873	ENSACIG00000002739	-	97	81.873	Amphilophus_citrinellus
ENSGALG00000013155	-	98	85.358	ENSACIG00000010933	pcbp3	93	85.358	Amphilophus_citrinellus
ENSGALG00000013155	-	93	78.025	ENSAOCG00000007806	-	99	78.025	Amphiprion_ocellaris
ENSGALG00000013155	-	99	80.000	ENSAOCG00000008592	-	97	82.979	Amphiprion_ocellaris
ENSGALG00000013155	-	99	81.024	ENSAPEG00000005209	-	97	81.024	Amphiprion_percula
ENSGALG00000013155	-	98	83.587	ENSAPEG00000008011	pcbp3	93	86.544	Amphiprion_percula
ENSGALG00000013155	-	99	81.763	ENSATEG00000009833	-	97	81.763	Anabas_testudineus
ENSGALG00000013155	-	98	86.207	ENSATEG00000015787	-	98	86.207	Anabas_testudineus
ENSGALG00000013155	-	99	79.539	ENSAPLG00000002975	-	98	81.073	Anas_platyrhynchos
ENSGALG00000013155	-	96	92.308	ENSAPLG00000008951	-	81	92.308	Anas_platyrhynchos
ENSGALG00000013155	-	99	94.277	ENSACAG00000009819	-	99	95.044	Anolis_carolinensis
ENSGALG00000013155	-	99	81.586	ENSACAG00000004607	-	99	83.056	Anolis_carolinensis
ENSGALG00000013155	-	93	80.000	ENSANAG00000030702	-	98	80.859	Aotus_nancymaae
ENSGALG00000013155	-	99	81.902	ENSACLG00000003801	-	97	82.143	Astatotilapia_calliptera
ENSGALG00000013155	-	98	83.283	ENSACLG00000011835	pcbp3	93	86.280	Astatotilapia_calliptera
ENSGALG00000013155	-	98	70.294	ENSAMXG00000001760	zgc:110045	75	68.056	Astyanax_mexicanus
ENSGALG00000013155	-	98	82.390	ENSAMXG00000013588	-	98	82.390	Astyanax_mexicanus
ENSGALG00000013155	-	98	85.321	ENSAMXG00000003440	pcbp3	93	88.308	Astyanax_mexicanus
ENSGALG00000013155	-	94	81.028	ENSCAFG00020019472	-	83	83.984	Canis_lupus_dingo
ENSGALG00000013155	-	99	81.982	ENSCSAG00000007440	-	89	83.529	Chlorocebus_sabaeus
ENSGALG00000013155	-	98	83.742	ENSCPBG00000012151	-	99	79.722	Chrysemys_picta_bellii
ENSGALG00000013155	-	98	96.933	ENSCPBG00000000733	-	74	98.795	Chrysemys_picta_bellii
ENSGALG00000013155	-	99	81.231	ENSCSEG00000000822	pcbp3	99	81.231	Cynoglossus_semilaevis
ENSGALG00000013155	-	99	68.272	ENSCSEG00000016984	-	95	75.000	Cynoglossus_semilaevis
ENSGALG00000013155	-	98	83.841	ENSCVAG00000014482	pcbp3	93	86.810	Cyprinodon_variegatus
ENSGALG00000013155	-	99	80.723	ENSCVAG00000005262	-	98	81.871	Cyprinodon_variegatus
ENSGALG00000013155	-	99	84.731	ENSDARG00000054378	pcbp3	98	86.765	Danio_rerio
ENSGALG00000013155	-	99	72.372	ENSETEG00000015988	-	98	72.059	Echinops_telfairi
ENSGALG00000013155	-	80	61.567	ENSEBUG00000005495	pcbp3	73	64.179	Eptatretus_burgeri
ENSGALG00000013155	-	97	76.220	ENSEBUG00000007485	-	92	74.793	Eptatretus_burgeri
ENSGALG00000013155	-	93	67.327	ENSEBUG00000016192	pcbp3	99	68.729	Eptatretus_burgeri
ENSGALG00000013155	-	97	84.923	ENSELUG00000003521	pcbp3	94	86.145	Esox_lucius
ENSGALG00000013155	-	97	81.790	ENSELUG00000001560	-	94	81.081	Esox_lucius
ENSGALG00000013155	-	98	89.489	ENSFALG00000004411	-	77	91.484	Ficedula_albicollis
ENSGALG00000013155	-	99	83.133	ENSFALG00000003949	-	98	84.661	Ficedula_albicollis
ENSGALG00000013155	-	98	82.704	ENSFHEG00000016615	pcbp3	93	82.704	Fundulus_heteroclitus
ENSGALG00000013155	-	99	81.024	ENSFHEG00000006539	-	97	81.024	Fundulus_heteroclitus
ENSGALG00000013155	-	98	69.054	ENSGMOG00000011992	pcbp3	95	71.875	Gadus_morhua
ENSGALG00000013155	-	98	61.207	ENSGMOG00000008611	-	99	61.671	Gadus_morhua
ENSGALG00000013155	-	99	82.286	ENSGALG00000004394	-	99	81.337	Gallus_gallus
ENSGALG00000013155	-	99	82.875	ENSGAFG00000011430	pcbp3	98	80.352	Gambusia_affinis
ENSGALG00000013155	-	98	81.040	ENSGAFG00000010274	-	94	83.082	Gambusia_affinis
ENSGALG00000013155	-	99	76.000	ENSGACG00000002266	-	97	77.746	Gasterosteus_aculeatus
ENSGALG00000013155	-	98	73.410	ENSGACG00000014955	-	96	75.575	Gasterosteus_aculeatus
ENSGALG00000013155	-	90	97.992	ENSGAGG00000000271	-	100	91.696	Gopherus_agassizii
ENSGALG00000013155	-	88	78.603	ENSGAGG00000006956	-	93	78.603	Gopherus_agassizii
ENSGALG00000013155	-	98	83.537	ENSHBUG00000010697	pcbp3	93	86.544	Haplochromis_burtoni
ENSGALG00000013155	-	99	81.902	ENSHBUG00000021782	-	97	82.143	Haplochromis_burtoni
ENSGALG00000013155	-	99	77.177	ENSHCOG00000006067	-	97	79.228	Hippocampus_comes
ENSGALG00000013155	-	98	84.098	ENSHCOG00000017868	pcbp3	93	87.077	Hippocampus_comes
ENSGALG00000013155	-	99	84.731	ENSIPUG00000006238	pcbp3	99	86.257	Ictalurus_punctatus
ENSGALG00000013155	-	98	83.384	ENSKMAG00000003046	pcbp3	93	86.544	Kryptolebias_marmoratus
ENSGALG00000013155	-	98	80.734	ENSKMAG00000018530	-	97	78.485	Kryptolebias_marmoratus
ENSGALG00000013155	-	98	81.308	ENSLBEG00000006201	pcbp3	97	78.529	Labrus_bergylta
ENSGALG00000013155	-	99	70.000	ENSLBEG00000006542	-	97	71.212	Labrus_bergylta
ENSGALG00000013155	-	98	81.429	ENSLACG00000010386	pcbp3	76	83.008	Latimeria_chalumnae
ENSGALG00000013155	-	98	88.825	ENSLACG00000010804	zgc:110045	76	90.582	Latimeria_chalumnae
ENSGALG00000013155	-	98	94.172	ENSLOCG00000005058	zgc:110045	83	94.461	Lepisosteus_oculatus
ENSGALG00000013155	-	99	85.886	ENSLOCG00000009369	pcbp3	99	87.353	Lepisosteus_oculatus
ENSGALG00000013155	-	99	82.243	ENSMAMG00000022336	pcbp3	92	82.243	Mastacembelus_armatus
ENSGALG00000013155	-	99	82.569	ENSMAMG00000011620	-	96	82.569	Mastacembelus_armatus
ENSGALG00000013155	-	98	80.503	ENSMZEG00005014882	-	93	79.751	Maylandia_zebra
ENSGALG00000013155	-	98	83.792	ENSMZEG00005008993	pcbp3	97	83.587	Maylandia_zebra
ENSGALG00000013155	-	99	73.926	ENSMGAG00000001883	-	97	78.063	Meleagris_gallopavo
ENSGALG00000013155	-	96	92.857	ENSMGAG00000006794	-	77	92.857	Meleagris_gallopavo
ENSGALG00000013155	-	99	81.902	ENSMMOG00000005216	-	97	81.902	Mola_mola
ENSGALG00000013155	-	99	78.248	ENSMMOG00000000730	pcbp3	88	78.338	Mola_mola
ENSGALG00000013155	-	73	78.241	ENSMODG00000027884	-	94	78.241	Monodelphis_domestica
ENSGALG00000013155	-	99	85.185	ENSMALG00000000691	pcbp3	95	85.185	Monopterus_albus
ENSGALG00000013155	-	99	74.644	ENSMPUG00000001779	-	89	74.644	Mustela_putorius_furo
ENSGALG00000013155	-	98	86.164	ENSNBRG00000016409	-	93	86.164	Neolamprologus_brichardi
ENSGALG00000013155	-	99	82.675	ENSNBRG00000016714	-	95	82.675	Neolamprologus_brichardi
ENSGALG00000013155	-	98	82.353	ENSOPRG00000003431	-	99	82.353	Ochotona_princeps
ENSGALG00000013155	-	99	78.571	ENSONIG00000012122	-	96	82.029	Oreochromis_niloticus
ENSGALG00000013155	-	99	79.940	ENSONIG00000004611	-	97	82.143	Oreochromis_niloticus
ENSGALG00000013155	-	99	82.229	ENSOCUG00000002696	-	89	83.776	Oryctolagus_cuniculus
ENSGALG00000013155	-	98	80.428	ENSORLG00000000059	pcbp3	98	83.436	Oryzias_latipes
ENSGALG00000013155	-	99	80.539	ENSORLG00000022739	-	97	82.738	Oryzias_latipes
ENSGALG00000013155	-	99	82.209	ENSORLG00020006124	-	97	82.440	Oryzias_latipes_hni
ENSGALG00000013155	-	98	80.428	ENSORLG00020012671	pcbp3	96	83.180	Oryzias_latipes_hni
ENSGALG00000013155	-	98	81.346	ENSORLG00015008051	-	92	84.308	Oryzias_latipes_hsok
ENSGALG00000013155	-	98	80.428	ENSORLG00015000429	pcbp3	96	83.180	Oryzias_latipes_hsok
ENSGALG00000013155	-	99	82.515	ENSOMEG00000020162	-	97	82.738	Oryzias_melastigma
ENSGALG00000013155	-	92	81.667	ENSOMEG00000020811	pcbp3	98	80.656	Oryzias_melastigma
ENSGALG00000013155	-	99	77.654	ENSOGAG00000008044	-	99	79.178	Otolemur_garnettii
ENSGALG00000013155	-	98	83.489	ENSPKIG00000019329	pcbp3	95	83.489	Paramormyrops_kingsleyae
ENSGALG00000013155	-	81	91.089	ENSPKIG00000020913	-	91	91.089	Paramormyrops_kingsleyae
ENSGALG00000013155	-	90	97.992	ENSPSIG00000008350	-	69	97.992	Pelodiscus_sinensis
ENSGALG00000013155	-	99	70.286	ENSPSIG00000014970	-	98	72.829	Pelodiscus_sinensis
ENSGALG00000013155	-	99	83.082	ENSPMGG00000022383	pcbp3	94	86.585	Periophthalmus_magnuspinnatus
ENSGALG00000013155	-	73	91.146	ENSPMAG00000004637	-	99	91.146	Petromyzon_marinus
ENSGALG00000013155	-	97	67.477	ENSPMAG00000004551	pcbp3	88	69.697	Petromyzon_marinus
ENSGALG00000013155	-	99	86.186	ENSPCIG00000028092	-	99	87.647	Phascolarctos_cinereus
ENSGALG00000013155	-	99	79.472	ENSPLAG00000011449	pcbp3	87	79.472	Poecilia_latipinna
ENSGALG00000013155	-	99	79.586	ENSPLAG00000004074	-	91	79.586	Poecilia_latipinna
ENSGALG00000013155	-	99	83.385	ENSPMEG00000021239	pcbp3	93	86.018	Poecilia_mexicana
ENSGALG00000013155	-	98	83.333	ENSPMEG00000006653	-	97	81.065	Poecilia_mexicana
ENSGALG00000013155	-	99	79.938	ENSPREG00000015736	pcbp3	98	79.938	Poecilia_reticulata
ENSGALG00000013155	-	99	82.515	ENSPREG00000020585	-	97	82.515	Poecilia_reticulata
ENSGALG00000013155	-	99	81.902	ENSPNYG00000013205	-	97	81.902	Pundamilia_nyererei
ENSGALG00000013155	-	99	79.456	ENSPNYG00000012326	pcbp3	95	79.456	Pundamilia_nyererei
ENSGALG00000013155	-	99	80.539	ENSPNAG00000015104	pcbp3	98	82.647	Pygocentrus_nattereri
ENSGALG00000013155	-	98	84.098	ENSPNAG00000008541	-	93	87.117	Pygocentrus_nattereri
ENSGALG00000013155	-	99	81.982	ENSRNOG00000001245	Pcbp3	98	83.529	Rattus_norvegicus
ENSGALG00000013155	-	99	75.072	ENSRBIG00000028177	-	99	74.124	Rhinopithecus_bieti
ENSGALG00000013155	-	99	79.494	ENSSHAG00000007890	-	99	79.666	Sarcophilus_harrisii
ENSGALG00000013155	-	98	83.951	ENSSFOG00015007118	-	95	82.883	Scleropages_formosus
ENSGALG00000013155	-	97	85.185	ENSSFOG00015014706	pcbp3	93	87.654	Scleropages_formosus
ENSGALG00000013155	-	98	86.196	ENSSFOG00015010205	pcbp3	98	86.769	Scleropages_formosus
ENSGALG00000013155	-	98	82.243	ENSSMAG00000011929	pcbp3	96	82.243	Scophthalmus_maximus
ENSGALG00000013155	-	99	81.459	ENSSMAG00000003135	-	99	81.105	Scophthalmus_maximus
ENSGALG00000013155	-	98	81.424	ENSSDUG00000008502	-	98	76.687	Seriola_dumerili
ENSGALG00000013155	-	98	85.714	ENSSDUG00000011608	pcbp3	98	85.714	Seriola_dumerili
ENSGALG00000013155	-	98	85.714	ENSSLDG00000008518	pcbp3	98	85.714	Seriola_lalandi_dorsalis
ENSGALG00000013155	-	98	81.346	ENSSLDG00000020161	-	92	84.308	Seriola_lalandi_dorsalis
ENSGALG00000013155	-	98	91.570	ENSSPUG00000013214	-	91	99.306	Sphenodon_punctatus
ENSGALG00000013155	-	93	78.025	ENSSPAG00000004190	-	99	78.025	Stegastes_partitus
ENSGALG00000013155	-	98	73.148	ENSSPAG00000023341	-	93	73.148	Stegastes_partitus
ENSGALG00000013155	-	99	75.921	ENSTGUG00000003316	-	99	76.667	Taeniopygia_guttata
ENSGALG00000013155	-	99	88.589	ENSTGUG00000008158	-	99	89.706	Taeniopygia_guttata
ENSGALG00000013155	-	98	83.129	ENSTRUG00000013604	pcbp3	84	92.708	Takifugu_rubripes
ENSGALG00000013155	-	93	81.699	ENSTRUG00000006280	-	90	81.699	Takifugu_rubripes
ENSGALG00000013155	-	99	80.398	ENSTTRG00000015075	-	99	81.894	Tursiops_truncatus
ENSGALG00000013155	-	93	89.908	ENSXETG00000010491	pcbp2	75	90.351	Xenopus_tropicalis
ENSGALG00000013155	-	99	77.904	ENSXETG00000011483	pcbp1	99	79.167	Xenopus_tropicalis
ENSGALG00000013155	-	99	82.388	ENSXCOG00000020481	pcbp3	93	86.018	Xiphophorus_couchianus
ENSGALG00000013155	-	99	82.727	ENSXMAG00000028711	-	97	83.636	Xiphophorus_maculatus
ENSGALG00000013155	-	98	83.587	ENSXMAG00000008175	pcbp3	93	86.544	Xiphophorus_maculatus