EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000013352 (Gene tree)
Gene ID: 426042
Gene Symbol: SF3B4
Alias: Hsh49|SAP49|SF3b49
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 5185 bases
Position: chr25:1842753-1847937
Accession: 426042
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000021749	RRM_1	PF00076.22	2.9e-39	1	2
ENSGALP00000021749	RRM_1	PF00076.22	2.9e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000021786	SF3B4-201	1550	-	ENSGALP00000021749	418 (aa)	XP_423721	H9L019

Gene Model

Click here to download ENSGALG00000013352's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000013352's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000013352	SF3B4	90	89.556	ENSG00000143368	SF3B4	90	100.000	Homo_sapiens
ENSGALG00000013352	SF3B4	55	98.690	ENSAPOG00000017647	sf3b4	54	100.000	Acanthochromis_polyacanthus
ENSGALG00000013352	SF3B4	90	89.817	ENSAMEG00000010073	SF3B4	99	89.362	Ailuropoda_melanoleuca
ENSGALG00000013352	SF3B4	55	96.537	ENSACIG00000018455	sf3b4	63	99.065	Amphilophus_citrinellus
ENSGALG00000013352	SF3B4	54	99.119	ENSAOCG00000019801	sf3b4	54	100.000	Amphiprion_ocellaris
ENSGALG00000013352	SF3B4	54	99.119	ENSAPEG00000010365	sf3b4	54	100.000	Amphiprion_percula
ENSGALG00000013352	SF3B4	55	98.690	ENSATEG00000012844	sf3b4	53	100.000	Anabas_testudineus
ENSGALG00000013352	SF3B4	100	95.455	ENSACAG00000010019	SF3B4	99	95.215	Anolis_carolinensis
ENSGALG00000013352	SF3B4	90	89.556	ENSANAG00000031025	SF3B4	99	89.125	Aotus_nancymaae
ENSGALG00000013352	SF3B4	57	95.781	ENSACLG00000014260	sf3b4	53	100.000	Astatotilapia_calliptera
ENSGALG00000013352	SF3B4	55	98.253	ENSAMXG00000008282	sf3b4	53	100.000	Astyanax_mexicanus
ENSGALG00000013352	SF3B4	84	88.515	ENSBTAG00000012793	-	53	94.931	Bos_taurus
ENSGALG00000013352	SF3B4	90	89.817	ENSBTAG00000012495	SF3B4	99	89.362	Bos_taurus
ENSGALG00000013352	SF3B4	51	81.395	WBGene00004723	sap-49	55	81.690	Caenorhabditis_elegans
ENSGALG00000013352	SF3B4	90	89.295	ENSCAFG00000011617	SF3B4	99	88.889	Canis_familiaris
ENSGALG00000013352	SF3B4	90	89.295	ENSCAFG00020019775	SF3B4	99	88.889	Canis_lupus_dingo
ENSGALG00000013352	SF3B4	99	56.115	ENSCHIG00000006654	-	50	74.627	Capra_hircus
ENSGALG00000013352	SF3B4	90	89.817	ENSCHIG00000025663	-	99	89.362	Capra_hircus
ENSGALG00000013352	SF3B4	90	89.556	ENSTSYG00000009295	SF3B4	99	89.125	Carlito_syrichta
ENSGALG00000013352	SF3B4	89	76.235	ENSCAPG00000006451	SF3B4	78	100.000	Cavia_aperea
ENSGALG00000013352	SF3B4	90	89.556	ENSCPOG00000008267	SF3B4	99	89.125	Cavia_porcellus
ENSGALG00000013352	SF3B4	74	80.831	ENSCCAG00000019823	-	91	73.057	Cebus_capucinus
ENSGALG00000013352	SF3B4	94	80.000	ENSCCAG00000021751	-	99	79.386	Cebus_capucinus
ENSGALG00000013352	SF3B4	90	89.556	ENSCATG00000033114	SF3B4	99	89.125	Cercocebus_atys
ENSGALG00000013352	SF3B4	90	89.556	ENSCLAG00000015851	SF3B4	99	89.125	Chinchilla_lanigera
ENSGALG00000013352	SF3B4	90	89.556	ENSCSAG00000018129	SF3B4	99	89.125	Chlorocebus_sabaeus
ENSGALG00000013352	SF3B4	100	97.136	ENSCPBG00000008041	SF3B4	100	97.136	Chrysemys_picta_bellii
ENSGALG00000013352	SF3B4	54	87.665	ENSCING00000002337	-	58	90.654	Ciona_intestinalis
ENSGALG00000013352	SF3B4	50	91.429	ENSCSAVG00000007809	-	89	89.881	Ciona_savignyi
ENSGALG00000013352	SF3B4	90	89.556	ENSCANG00000035579	SF3B4	99	89.125	Colobus_angolensis_palliatus
ENSGALG00000013352	SF3B4	90	89.817	ENSCGRG00001003590	Sf3b4	99	89.362	Cricetulus_griseus_chok1gshd
ENSGALG00000013352	SF3B4	90	89.817	ENSCGRG00000016914	Sf3b4	99	89.362	Cricetulus_griseus_crigri
ENSGALG00000013352	SF3B4	64	88.889	ENSCVAG00000005536	sf3b4	55	100.000	Cyprinodon_variegatus
ENSGALG00000013352	SF3B4	55	98.696	ENSDARG00000018574	sf3b4	54	100.000	Danio_rerio
ENSGALG00000013352	SF3B4	89	86.400	ENSDNOG00000048908	-	99	86.265	Dasypus_novemcinctus
ENSGALG00000013352	SF3B4	97	72.155	ENSDNOG00000037231	-	50	87.245	Dasypus_novemcinctus
ENSGALG00000013352	SF3B4	90	89.817	ENSDORG00000016366	Sf3b4	99	89.362	Dipodomys_ordii
ENSGALG00000013352	SF3B4	53	86.425	FBgn0015818	Spx	62	88.318	Drosophila_melanogaster
ENSGALG00000013352	SF3B4	75	82.188	ENSETEG00000008963	SF3B4	99	80.378	Echinops_telfairi
ENSGALG00000013352	SF3B4	90	89.817	ENSEASG00005001477	SF3B4	99	89.362	Equus_asinus_asinus
ENSGALG00000013352	SF3B4	90	89.817	ENSECAG00000024737	SF3B4	99	89.362	Equus_caballus
ENSGALG00000013352	SF3B4	55	99.127	ENSELUG00000012876	sf3b4	53	100.000	Esox_lucius
ENSGALG00000013352	SF3B4	90	89.817	ENSFCAG00000010106	SF3B4	99	89.362	Felis_catus
ENSGALG00000013352	SF3B4	90	89.556	ENSFDAG00000009286	SF3B4	99	89.125	Fukomys_damarensis
ENSGALG00000013352	SF3B4	55	97.380	ENSGMOG00000002519	sf3b4	63	99.533	Gadus_morhua
ENSGALG00000013352	SF3B4	63	93.962	ENSGAFG00000010181	sf3b4	54	100.000	Gambusia_affinis
ENSGALG00000013352	SF3B4	100	96.897	ENSGAGG00000025055	SF3B4	88	96.897	Gopherus_agassizii
ENSGALG00000013352	SF3B4	90	89.556	ENSGGOG00000004761	SF3B4	99	89.125	Gorilla_gorilla
ENSGALG00000013352	SF3B4	100	66.430	ENSGGOG00000038845	-	55	88.318	Gorilla_gorilla
ENSGALG00000013352	SF3B4	57	95.781	ENSHBUG00000002028	sf3b4	53	100.000	Haplochromis_burtoni
ENSGALG00000013352	SF3B4	90	89.556	ENSHGLG00000012360	SF3B4	99	89.125	Heterocephalus_glaber_female
ENSGALG00000013352	SF3B4	90	85.789	ENSHGLG00100008533	SF3B4	58	96.708	Heterocephalus_glaber_male
ENSGALG00000013352	SF3B4	55	98.696	ENSIPUG00000012242	Sf3b4	54	100.000	Ictalurus_punctatus
ENSGALG00000013352	SF3B4	90	89.817	ENSSTOG00000000684	-	99	89.362	Ictidomys_tridecemlineatus
ENSGALG00000013352	SF3B4	75	69.737	ENSJJAG00000022500	Sf3b4	94	70.742	Jaculus_jaculus
ENSGALG00000013352	SF3B4	57	96.624	ENSKMAG00000008154	sf3b4	54	100.000	Kryptolebias_marmoratus
ENSGALG00000013352	SF3B4	56	98.283	ENSLBEG00000026818	sf3b4	54	100.000	Labrus_bergylta
ENSGALG00000013352	SF3B4	58	96.708	ENSLACG00000004436	SF3B4	67	96.708	Latimeria_chalumnae
ENSGALG00000013352	SF3B4	58	97.531	ENSLOCG00000009048	sf3b4	58	97.531	Lepisosteus_oculatus
ENSGALG00000013352	SF3B4	90	90.365	ENSLAFG00000008531	SF3B4	99	87.736	Loxodonta_africana
ENSGALG00000013352	SF3B4	90	89.556	ENSMFAG00000042395	SF3B4	99	89.125	Macaca_fascicularis
ENSGALG00000013352	SF3B4	91	67.454	ENSMFAG00000039067	-	53	80.000	Macaca_fascicularis
ENSGALG00000013352	SF3B4	90	89.556	ENSMMUG00000007256	SF3B4	99	89.125	Macaca_mulatta
ENSGALG00000013352	SF3B4	90	89.556	ENSMNEG00000031839	SF3B4	99	89.125	Macaca_nemestrina
ENSGALG00000013352	SF3B4	91	66.929	ENSMNEG00000031526	-	53	79.500	Macaca_nemestrina
ENSGALG00000013352	SF3B4	90	89.556	ENSMLEG00000038667	SF3B4	99	89.125	Mandrillus_leucophaeus
ENSGALG00000013352	SF3B4	57	96.203	ENSMAMG00000014692	sf3b4	54	100.000	Mastacembelus_armatus
ENSGALG00000013352	SF3B4	57	95.781	ENSMZEG00005026741	sf3b4	53	100.000	Maylandia_zebra
ENSGALG00000013352	SF3B4	100	99.043	ENSMGAG00000000653	SF3B4	100	99.043	Meleagris_gallopavo
ENSGALG00000013352	SF3B4	90	89.817	ENSMAUG00000015266	Sf3b4	99	89.362	Mesocricetus_auratus
ENSGALG00000013352	SF3B4	90	89.817	ENSMICG00000044961	SF3B4	99	89.362	Microcebus_murinus
ENSGALG00000013352	SF3B4	90	90.078	ENSMOCG00000013658	-	99	89.598	Microtus_ochrogaster
ENSGALG00000013352	SF3B4	92	79.381	ENSMOCG00000014155	-	99	79.376	Microtus_ochrogaster
ENSGALG00000013352	SF3B4	55	99.563	ENSMMOG00000018032	sf3b4	55	100.000	Mola_mola
ENSGALG00000013352	SF3B4	90	90.078	ENSMODG00000018767	SF3B4	99	89.598	Monodelphis_domestica
ENSGALG00000013352	SF3B4	54	98.678	ENSMALG00000006174	sf3b4	53	100.000	Monopterus_albus
ENSGALG00000013352	SF3B4	90	89.556	MGP_CAROLIEiJ_G0025365	Sf3b4	57	96.708	Mus_caroli
ENSGALG00000013352	SF3B4	90	89.817	ENSMUSG00000068856	Sf3b4	99	89.362	Mus_musculus
ENSGALG00000013352	SF3B4	90	89.817	MGP_PahariEiJ_G0026809	Sf3b4	99	89.362	Mus_pahari
ENSGALG00000013352	SF3B4	90	89.817	MGP_SPRETEiJ_G0026309	Sf3b4	99	89.362	Mus_spretus
ENSGALG00000013352	SF3B4	90	89.817	ENSMPUG00000005563	SF3B4	99	89.362	Mustela_putorius_furo
ENSGALG00000013352	SF3B4	90	89.817	ENSMLUG00000010789	SF3B4	99	89.362	Myotis_lucifugus
ENSGALG00000013352	SF3B4	90	90.601	ENSNGAG00000016337	Sf3b4	99	87.943	Nannospalax_galili
ENSGALG00000013352	SF3B4	57	96.203	ENSNBRG00000013865	sf3b4	53	100.000	Neolamprologus_brichardi
ENSGALG00000013352	SF3B4	100	69.031	ENSNLEG00000000537	-	61	87.448	Nomascus_leucogenys
ENSGALG00000013352	SF3B4	81	100.000	ENSMEUG00000003272	SF3B4	82	100.000	Notamacropus_eugenii
ENSGALG00000013352	SF3B4	55	93.860	ENSOPRG00000010808	SF3B4	50	95.327	Ochotona_princeps
ENSGALG00000013352	SF3B4	91	64.062	ENSODEG00000008916	-	55	76.415	Octodon_degus
ENSGALG00000013352	SF3B4	74	78.233	ENSODEG00000003597	-	65	81.439	Octodon_degus
ENSGALG00000013352	SF3B4	57	96.203	ENSONIG00000002730	sf3b4	53	100.000	Oreochromis_niloticus
ENSGALG00000013352	SF3B4	59	73.282	ENSOANG00000004768	-	50	81.944	Ornithorhynchus_anatinus
ENSGALG00000013352	SF3B4	90	89.817	ENSOCUG00000004614	SF3B4	99	89.362	Oryctolagus_cuniculus
ENSGALG00000013352	SF3B4	56	97.845	ENSORLG00000003062	sf3b4	55	100.000	Oryzias_latipes
ENSGALG00000013352	SF3B4	56	97.845	ENSORLG00020000687	sf3b4	54	100.000	Oryzias_latipes_hni
ENSGALG00000013352	SF3B4	56	97.845	ENSORLG00015010989	sf3b4	54	100.000	Oryzias_latipes_hsok
ENSGALG00000013352	SF3B4	56	97.845	ENSOMEG00000013694	sf3b4	54	100.000	Oryzias_melastigma
ENSGALG00000013352	SF3B4	90	89.817	ENSOGAG00000006265	SF3B4	99	89.362	Otolemur_garnettii
ENSGALG00000013352	SF3B4	86	68.871	ENSOARG00000007368	-	51	83.333	Ovis_aries
ENSGALG00000013352	SF3B4	90	89.817	ENSOARG00000020718	-	99	89.362	Ovis_aries
ENSGALG00000013352	SF3B4	90	89.556	ENSPPAG00000040904	SF3B4	99	89.125	Pan_paniscus
ENSGALG00000013352	SF3B4	100	72.577	ENSPPAG00000030024	-	58	86.611	Pan_paniscus
ENSGALG00000013352	SF3B4	90	89.817	ENSPPRG00000007384	SF3B4	99	89.362	Panthera_pardus
ENSGALG00000013352	SF3B4	90	89.817	ENSPTIG00000014530	SF3B4	99	89.125	Panthera_tigris_altaica
ENSGALG00000013352	SF3B4	90	89.556	ENSPTRG00000001243	SF3B4	99	89.125	Pan_troglodytes
ENSGALG00000013352	SF3B4	100	71.631	ENSPTRG00000049727	-	60	87.029	Pan_troglodytes
ENSGALG00000013352	SF3B4	90	89.556	ENSPANG00000005126	SF3B4	99	89.125	Papio_anubis
ENSGALG00000013352	SF3B4	56	98.276	ENSPKIG00000020669	sf3b4	57	100.000	Paramormyrops_kingsleyae
ENSGALG00000013352	SF3B4	66	79.636	ENSPSIG00000009565	SF3B4	63	100.000	Pelodiscus_sinensis
ENSGALG00000013352	SF3B4	90	89.817	ENSPEMG00000017568	Sf3b4	99	89.362	Peromyscus_maniculatus_bairdii
ENSGALG00000013352	SF3B4	90	72.135	ENSPMAG00000007842	-	50	95.327	Petromyzon_marinus
ENSGALG00000013352	SF3B4	90	90.078	ENSPCIG00000008765	SF3B4	99	89.598	Phascolarctos_cinereus
ENSGALG00000013352	SF3B4	65	92.222	ENSPFOG00000005754	sf3b4	54	100.000	Poecilia_formosa
ENSGALG00000013352	SF3B4	65	92.222	ENSPLAG00000001401	sf3b4	59	100.000	Poecilia_latipinna
ENSGALG00000013352	SF3B4	65	92.593	ENSPREG00000011076	sf3b4	53	100.000	Poecilia_reticulata
ENSGALG00000013352	SF3B4	50	96.635	ENSPCAG00000000392	SF3B4	50	96.635	Procavia_capensis
ENSGALG00000013352	SF3B4	90	89.817	ENSPCOG00000015399	SF3B4	99	89.362	Propithecus_coquereli
ENSGALG00000013352	SF3B4	90	89.817	ENSPVAG00000014171	SF3B4	99	89.362	Pteropus_vampyrus
ENSGALG00000013352	SF3B4	57	95.781	ENSPNYG00000012700	sf3b4	53	100.000	Pundamilia_nyererei
ENSGALG00000013352	SF3B4	55	98.690	ENSPNAG00000000686	sf3b4	55	100.000	Pygocentrus_nattereri
ENSGALG00000013352	SF3B4	90	89.817	ENSRNOG00000021181	Sf3b4	99	89.362	Rattus_norvegicus
ENSGALG00000013352	SF3B4	90	89.556	ENSRBIG00000043392	SF3B4	99	89.125	Rhinopithecus_bieti
ENSGALG00000013352	SF3B4	90	89.556	ENSRROG00000029366	SF3B4	99	89.125	Rhinopithecus_roxellana
ENSGALG00000013352	SF3B4	92	64.010	ENSRROG00000028213	-	52	75.243	Rhinopithecus_roxellana
ENSGALG00000013352	SF3B4	90	89.295	ENSSBOG00000012310	-	99	88.889	Saimiri_boliviensis_boliviensis
ENSGALG00000013352	SF3B4	90	87.206	ENSSHAG00000004043	SF3B4	99	88.158	Sarcophilus_harrisii
ENSGALG00000013352	SF3B4	57	97.468	ENSSFOG00015008864	sf3b4	53	100.000	Scleropages_formosus
ENSGALG00000013352	SF3B4	54	99.115	ENSSMAG00000006837	sf3b4	54	100.000	Scophthalmus_maximus
ENSGALG00000013352	SF3B4	55	98.261	ENSSDUG00000012064	sf3b4	53	100.000	Seriola_dumerili
ENSGALG00000013352	SF3B4	55	98.696	ENSSLDG00000014226	sf3b4	53	100.000	Seriola_lalandi_dorsalis
ENSGALG00000013352	SF3B4	100	82.394	ENSSPUG00000001028	SF3B4	54	100.000	Sphenodon_punctatus
ENSGALG00000013352	SF3B4	55	98.696	ENSSPAG00000019219	sf3b4	53	100.000	Stegastes_partitus
ENSGALG00000013352	SF3B4	90	90.601	ENSSSCG00000006665	-	99	87.943	Sus_scrofa
ENSGALG00000013352	SF3B4	85	57.542	ENSSSCG00000039440	-	51	64.953	Sus_scrofa
ENSGALG00000013352	SF3B4	60	96.063	ENSTGUG00000004470	SF3B4	100	96.063	Taeniopygia_guttata
ENSGALG00000013352	SF3B4	54	97.797	ENSTRUG00000004516	sf3b4	54	100.000	Takifugu_rubripes
ENSGALG00000013352	SF3B4	55	98.253	ENSTNIG00000009156	sf3b4	55	100.000	Tetraodon_nigroviridis
ENSGALG00000013352	SF3B4	90	89.817	ENSTTRG00000005217	SF3B4	99	89.362	Tursiops_truncatus
ENSGALG00000013352	SF3B4	90	89.817	ENSUAMG00000022468	SF3B4	99	89.362	Ursus_americanus
ENSGALG00000013352	SF3B4	93	89.594	ENSUMAG00000003802	SF3B4	99	86.998	Ursus_maritimus
ENSGALG00000013352	SF3B4	88	89.488	ENSVPAG00000008152	SF3B4	99	89.051	Vicugna_pacos
ENSGALG00000013352	SF3B4	75	89.028	ENSVVUG00000007732	-	96	83.375	Vulpes_vulpes
ENSGALG00000013352	SF3B4	62	93.023	ENSVVUG00000022697	-	54	93.023	Vulpes_vulpes
ENSGALG00000013352	SF3B4	55	98.261	ENSXCOG00000019895	sf3b4	55	100.000	Xiphophorus_couchianus
ENSGALG00000013352	SF3B4	55	98.690	ENSXMAG00000003772	sf3b4	55	100.000	Xiphophorus_maculatus