EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000013365 (Gene tree)
Gene ID: 426047
Gene Symbol: -
Alias: -
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 14556 bases
Position: chr28:1439512-1454067
Accession: 426047
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000021769	RRM_5	PF13893.6	2.8e-07	1	1
ENSGALP00000021769	RRM_1	PF00076.22	4.3e-13	1	1
ENSGALP00000021769	SAP	PF02037.27	2.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000021807	-	2959	XM_423726	ENSGALP00000021769	914 (aa)	XP_423726	H9L022

Gene Model

Click here to download ENSGALG00000013365's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000013365's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000013365	-	97	64.961	ENSG00000160633	SAFB	100	65.231	Homo_sapiens
ENSGALG00000013365	-	90	47.196	ENSAPOG00000022508	safb	64	45.302	Acanthochromis_polyacanthus
ENSGALG00000013365	-	69	62.579	ENSAMEG00000012254	SAFB	100	64.757	Ailuropoda_melanoleuca
ENSGALG00000013365	-	94	44.921	ENSACIG00000006247	safb	99	44.801	Amphilophus_citrinellus
ENSGALG00000013365	-	97	45.039	ENSAOCG00000006308	safb	99	44.643	Amphiprion_ocellaris
ENSGALG00000013365	-	92	46.154	ENSAPEG00000023342	safb	66	43.863	Amphiprion_percula
ENSGALG00000013365	-	95	46.374	ENSATEG00000004998	safb	64	44.426	Anabas_testudineus
ENSGALG00000013365	-	93	93.015	ENSAPLG00000005780	-	100	93.015	Anas_platyrhynchos
ENSGALG00000013365	-	89	76.407	ENSAPLG00000006355	-	100	75.416	Anas_platyrhynchos
ENSGALG00000013365	-	78	55.467	ENSACAG00000016893	-	75	53.002	Anolis_carolinensis
ENSGALG00000013365	-	97	64.627	ENSANAG00000028821	SAFB	100	64.909	Aotus_nancymaae
ENSGALG00000013365	-	97	45.993	ENSACLG00000001926	safb	99	43.165	Astatotilapia_calliptera
ENSGALG00000013365	-	97	45.683	ENSAMXG00000018154	safb	65	43.942	Astyanax_mexicanus
ENSGALG00000013365	-	97	64.581	ENSBTAG00000007875	SAFB	100	63.961	Bos_taurus
ENSGALG00000013365	-	81	66.667	ENSCJAG00000017081	SAFB	99	69.358	Callithrix_jacchus
ENSGALG00000013365	-	97	64.961	ENSCAFG00000018803	SAFB	87	65.770	Canis_familiaris
ENSGALG00000013365	-	97	65.628	ENSCAFG00020018943	SAFB	100	65.770	Canis_lupus_dingo
ENSGALG00000013365	-	97	63.911	ENSCHIG00000007262	SAFB	100	63.312	Capra_hircus
ENSGALG00000013365	-	100	61.474	ENSCPOG00000026322	SAFB	100	62.632	Cavia_porcellus
ENSGALG00000013365	-	97	64.556	ENSCCAG00000020193	SAFB	100	64.194	Cebus_capucinus
ENSGALG00000013365	-	97	64.961	ENSCATG00000029994	SAFB	100	65.231	Cercocebus_atys
ENSGALG00000013365	-	100	64.089	ENSCLAG00000007734	SAFB	100	63.877	Chinchilla_lanigera
ENSGALG00000013365	-	97	64.961	ENSCSAG00000009949	SAFB	100	65.231	Chlorocebus_sabaeus
ENSGALG00000013365	-	82	57.916	ENSCHOG00000003208	SAFB	88	58.739	Choloepus_hoffmanni
ENSGALG00000013365	-	92	69.404	ENSCPBG00000010936	-	100	71.622	Chrysemys_picta_bellii
ENSGALG00000013365	-	92	85.036	ENSCPBG00000010928	-	100	85.036	Chrysemys_picta_bellii
ENSGALG00000013365	-	97	61.513	ENSCANG00000019754	-	99	61.123	Colobus_angolensis_palliatus
ENSGALG00000013365	-	86	66.176	ENSCANG00000004774	-	99	67.805	Colobus_angolensis_palliatus
ENSGALG00000013365	-	97	60.997	ENSCGRG00001002254	Safb	100	61.789	Cricetulus_griseus_chok1gshd
ENSGALG00000013365	-	90	58.750	ENSCGRG00000011529	Safb	96	59.705	Cricetulus_griseus_crigri
ENSGALG00000013365	-	94	43.349	ENSCSEG00000019870	safb	65	41.107	Cynoglossus_semilaevis
ENSGALG00000013365	-	96	41.463	ENSCVAG00000002226	safb	99	38.353	Cyprinodon_variegatus
ENSGALG00000013365	-	92	46.084	ENSDARG00000020467	safb	69	53.237	Danio_rerio
ENSGALG00000013365	-	97	64.556	ENSDNOG00000015746	SAFB	95	65.204	Dasypus_novemcinctus
ENSGALG00000013365	-	65	60.784	ENSDORG00000016200	Safb	100	57.611	Dipodomys_ordii
ENSGALG00000013365	-	72	67.376	ENSETEG00000018679	SAFB	72	68.246	Echinops_telfairi
ENSGALG00000013365	-	97	63.234	ENSEASG00005023019	SAFB	100	64.026	Equus_asinus_asinus
ENSGALG00000013365	-	97	63.960	ENSECAG00000018659	SAFB	89	64.586	Equus_caballus
ENSGALG00000013365	-	97	44.218	ENSELUG00000022327	safb	68	43.128	Esox_lucius
ENSGALG00000013365	-	97	65.295	ENSFCAG00000011835	SAFB	100	65.447	Felis_catus
ENSGALG00000013365	-	100	91.485	ENSFALG00000013882	-	92	91.485	Ficedula_albicollis
ENSGALG00000013365	-	91	70.762	ENSFALG00000013881	-	99	71.477	Ficedula_albicollis
ENSGALG00000013365	-	68	60.436	ENSFDAG00000020306	SAFB	78	60.568	Fukomys_damarensis
ENSGALG00000013365	-	64	47.627	ENSFHEG00000004219	safb	66	40.789	Fundulus_heteroclitus
ENSGALG00000013365	-	95	42.384	ENSGMOG00000014280	safb	63	42.691	Gadus_morhua
ENSGALG00000013365	-	100	73.814	ENSGALG00000001948	-	100	76.037	Gallus_gallus
ENSGALG00000013365	-	96	41.586	ENSGAFG00000016162	safb	67	39.750	Gambusia_affinis
ENSGALG00000013365	-	97	45.338	ENSGACG00000011385	safb	66	44.608	Gasterosteus_aculeatus
ENSGALG00000013365	-	95	72.096	ENSGAGG00000008424	-	100	73.290	Gopherus_agassizii
ENSGALG00000013365	-	72	79.638	ENSGAGG00000017702	-	100	78.582	Gopherus_agassizii
ENSGALG00000013365	-	97	65.072	ENSGGOG00000015109	SAFB	100	65.339	Gorilla_gorilla
ENSGALG00000013365	-	97	43.174	ENSHBUG00000009218	safb	69	42.669	Haplochromis_burtoni
ENSGALG00000013365	-	100	63.376	ENSHGLG00000015883	SAFB	100	64.013	Heterocephalus_glaber_female
ENSGALG00000013365	-	100	51.801	ENSHGLG00100004228	SAFB	74	60.759	Heterocephalus_glaber_male
ENSGALG00000013365	-	91	41.287	ENSHCOG00000001705	safb	99	38.673	Hippocampus_comes
ENSGALG00000013365	-	94	48.194	ENSIPUG00000024869	safb2	65	46.353	Ictalurus_punctatus
ENSGALG00000013365	-	93	63.284	ENSSTOG00000002783	SAFB	100	64.579	Ictidomys_tridecemlineatus
ENSGALG00000013365	-	100	62.290	ENSJJAG00000009021	Safb	100	62.959	Jaculus_jaculus
ENSGALG00000013365	-	92	45.924	ENSKMAG00000022308	safb	66	43.415	Kryptolebias_marmoratus
ENSGALG00000013365	-	97	45.445	ENSLBEG00000006015	safb	65	43.954	Labrus_bergylta
ENSGALG00000013365	-	66	52.063	ENSLACG00000018090	SAFB	100	54.508	Latimeria_chalumnae
ENSGALG00000013365	-	95	50.654	ENSLOCG00000003613	safb	98	46.378	Lepisosteus_oculatus
ENSGALG00000013365	-	96	63.929	ENSLAFG00000003840	SAFB	100	64.547	Loxodonta_africana
ENSGALG00000013365	-	97	64.889	ENSMFAG00000003885	SAFB	100	64.516	Macaca_fascicularis
ENSGALG00000013365	-	97	64.961	ENSMMUG00000017970	SAFB	100	65.231	Macaca_mulatta
ENSGALG00000013365	-	97	63.193	ENSMNEG00000035637	SAFB	100	62.217	Macaca_nemestrina
ENSGALG00000013365	-	97	62.016	ENSMLEG00000038637	SAFB	88	62.500	Mandrillus_leucophaeus
ENSGALG00000013365	-	98	45.148	ENSMAMG00000003357	safb	60	42.338	Mastacembelus_armatus
ENSGALG00000013365	-	97	45.993	ENSMZEG00005009120	safb	99	43.165	Maylandia_zebra
ENSGALG00000013365	-	89	69.073	ENSMGAG00000001051	-	99	70.036	Meleagris_gallopavo
ENSGALG00000013365	-	97	96.497	ENSMGAG00000001101	-	100	96.497	Meleagris_gallopavo
ENSGALG00000013365	-	100	62.959	ENSMICG00000008739	-	100	63.930	Microcebus_murinus
ENSGALG00000013365	-	85	57.015	ENSMICG00000046795	-	99	58.824	Microcebus_murinus
ENSGALG00000013365	-	97	60.761	ENSMOCG00000014040	Safb	100	61.474	Microtus_ochrogaster
ENSGALG00000013365	-	100	65.282	ENSMODG00000001236	SAFB	100	66.348	Monodelphis_domestica
ENSGALG00000013365	-	97	45.130	ENSMALG00000020330	safb	70	42.581	Monopterus_albus
ENSGALG00000013365	-	100	60.947	MGP_CAROLIEiJ_G0021780	Safb	100	61.870	Mus_caroli
ENSGALG00000013365	-	100	60.947	ENSMUSG00000071054	Safb	100	61.870	Mus_musculus
ENSGALG00000013365	-	97	62.013	MGP_PahariEiJ_G0020769	Safb	100	61.910	Mus_pahari
ENSGALG00000013365	-	100	63.578	ENSMPUG00000006123	SAFB	94	65.231	Mustela_putorius_furo
ENSGALG00000013365	-	97	66.593	ENSMLUG00000001081	SAFB	100	65.484	Myotis_lucifugus
ENSGALG00000013365	-	100	60.064	ENSNGAG00000019882	Safb	100	61.352	Nannospalax_galili
ENSGALG00000013365	-	93	66.279	ENSNLEG00000013551	SAFB	99	65.017	Nomascus_leucogenys
ENSGALG00000013365	-	88	60.658	ENSOPRG00000011561	-	100	61.267	Ochotona_princeps
ENSGALG00000013365	-	100	63.492	ENSODEG00000014838	SAFB	100	64.233	Octodon_degus
ENSGALG00000013365	-	97	46.595	ENSONIG00000002318	safb	66	45.161	Oreochromis_niloticus
ENSGALG00000013365	-	90	57.876	ENSOCUG00000014628	SAFB	63	59.696	Oryctolagus_cuniculus
ENSGALG00000013365	-	92	44.713	ENSORLG00000016989	safb	66	42.764	Oryzias_latipes
ENSGALG00000013365	-	96	42.712	ENSORLG00020000404	safb	68	41.749	Oryzias_latipes_hni
ENSGALG00000013365	-	96	44.714	ENSORLG00015010733	safb	66	43.089	Oryzias_latipes_hsok
ENSGALG00000013365	-	96	44.809	ENSOMEG00000009066	safb	66	43.863	Oryzias_melastigma
ENSGALG00000013365	-	67	61.415	ENSOGAG00000027769	SAFB	100	59.676	Otolemur_garnettii
ENSGALG00000013365	-	78	59.444	ENSOARG00000007856	-	100	57.676	Ovis_aries
ENSGALG00000013365	-	97	61.341	ENSOARG00000007662	-	100	59.023	Ovis_aries
ENSGALG00000013365	-	97	65.000	ENSPPAG00000035129	SAFB	100	64.624	Pan_paniscus
ENSGALG00000013365	-	97	65.295	ENSPPRG00000017197	SAFB	100	65.447	Panthera_pardus
ENSGALG00000013365	-	97	65.000	ENSPTRG00000010335	SAFB	100	64.624	Pan_troglodytes
ENSGALG00000013365	-	97	64.556	ENSPANG00000007770	SAFB	100	64.516	Papio_anubis
ENSGALG00000013365	-	98	47.730	ENSPKIG00000009902	safb	68	46.802	Paramormyrops_kingsleyae
ENSGALG00000013365	-	100	82.553	ENSPSIG00000009367	-	100	82.234	Pelodiscus_sinensis
ENSGALG00000013365	-	100	72.140	ENSPSIG00000011679	-	100	75.085	Pelodiscus_sinensis
ENSGALG00000013365	-	97	61.111	ENSPEMG00000020428	Safb	100	61.920	Peromyscus_maniculatus_bairdii
ENSGALG00000013365	-	59	67.587	ENSPCIG00000009504	-	99	71.457	Phascolarctos_cinereus
ENSGALG00000013365	-	96	43.048	ENSPFOG00000007745	safb	99	40.065	Poecilia_formosa
ENSGALG00000013365	-	65	48.609	ENSPLAG00000001614	safb	68	39.104	Poecilia_latipinna
ENSGALG00000013365	-	64	48.689	ENSPMEG00000021023	safb	100	39.955	Poecilia_mexicana
ENSGALG00000013365	-	96	43.459	ENSPREG00000012496	safb	67	40.800	Poecilia_reticulata
ENSGALG00000013365	-	97	64.850	ENSPPYG00000009428	SAFB	100	65.124	Pongo_abelii
ENSGALG00000013365	-	100	60.622	ENSPCAG00000006475	SAFB	100	60.986	Procavia_capensis
ENSGALG00000013365	-	99	60.734	ENSPCOG00000014090	SAFB	99	60.150	Propithecus_coquereli
ENSGALG00000013365	-	97	60.667	ENSPVAG00000004913	SAFB	99	59.978	Pteropus_vampyrus
ENSGALG00000013365	-	97	46.318	ENSPNAG00000021838	safb	99	44.176	Pygocentrus_nattereri
ENSGALG00000013365	-	67	56.406	ENSRNOG00000050543	Safb	100	60.714	Rattus_norvegicus
ENSGALG00000013365	-	93	64.348	ENSRBIG00000042509	SAFB	100	59.263	Rhinopithecus_bieti
ENSGALG00000013365	-	97	64.889	ENSRROG00000029278	SAFB	100	64.516	Rhinopithecus_roxellana
ENSGALG00000013365	-	97	64.627	ENSSBOG00000026291	SAFB	100	64.909	Saimiri_boliviensis_boliviensis
ENSGALG00000013365	-	98	48.901	ENSSFOG00015008156	safb	67	47.806	Scleropages_formosus
ENSGALG00000013365	-	97	45.123	ENSSMAG00000009316	safb	66	43.922	Scophthalmus_maximus
ENSGALG00000013365	-	97	43.948	ENSSDUG00000009652	safb	99	41.676	Seriola_dumerili
ENSGALG00000013365	-	97	43.944	ENSSLDG00000001670	safb	66	42.301	Seriola_lalandi_dorsalis
ENSGALG00000013365	-	60	61.871	ENSSARG00000010475	SAFB	100	62.920	Sorex_araneus
ENSGALG00000013365	-	56	71.484	ENSSPUG00000009747	-	100	69.250	Sphenodon_punctatus
ENSGALG00000013365	-	81	67.718	ENSSPUG00000009820	-	98	70.618	Sphenodon_punctatus
ENSGALG00000013365	-	96	43.951	ENSSPAG00000015682	safb	99	42.565	Stegastes_partitus
ENSGALG00000013365	-	100	63.394	ENSSSCG00000013522	SAFB	99	66.115	Sus_scrofa
ENSGALG00000013365	-	93	74.971	ENSTGUG00000000489	-	100	75.799	Taeniopygia_guttata
ENSGALG00000013365	-	96	87.882	ENSTGUG00000000502	-	100	87.882	Taeniopygia_guttata
ENSGALG00000013365	-	92	45.057	ENSTRUG00000003567	safb	99	41.578	Takifugu_rubripes
ENSGALG00000013365	-	89	45.508	ENSTNIG00000015470	safb	100	45.052	Tetraodon_nigroviridis
ENSGALG00000013365	-	89	83.333	ENSTTRG00000013588	SAFB	92	63.077	Tursiops_truncatus
ENSGALG00000013365	-	77	64.135	ENSUAMG00000024543	SAFB	90	66.713	Ursus_americanus
ENSGALG00000013365	-	85	62.779	ENSUMAG00000009734	SAFB	96	62.561	Ursus_maritimus
ENSGALG00000013365	-	71	68.142	ENSVPAG00000012043	SAFB	79	70.206	Vicugna_pacos
ENSGALG00000013365	-	97	64.961	ENSVVUG00000013720	SAFB	87	65.770	Vulpes_vulpes
ENSGALG00000013365	-	66	50.903	ENSXETG00000008755	safb	99	53.061	Xenopus_tropicalis
ENSGALG00000013365	-	97	42.919	ENSXMAG00000003458	safb	66	42.390	Xiphophorus_maculatus