EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000013637 (Gene tree)
Gene ID: 421007
Gene Symbol: TDP2
Alias: TTRAP
Full Name: Gallus gallus tyrosyl-DNA phosphodiesterase 2 (TDP2)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 7253 bases
Position: chr2:90240952-90248204
Accession: NM_001276384
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000064624	Exo_endo_phos	PF03372.23	2.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000085077	-	1472	-	ENSGALP00000064624	369 (aa)	-	F1NW29

Gene Model

Click here to download ENSGALG00000013637's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000013637's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000013637	TDP2	92	64.620	ENSG00000111802	TDP2	91	69.784	Homo_sapiens
ENSGALG00000013637	TDP2	68	55.118	ENSAPOG00000018379	-	89	55.118	Acanthochromis_polyacanthus
ENSGALG00000013637	TDP2	75	67.986	ENSAMEG00000010230	TDP2	99	67.986	Ailuropoda_melanoleuca
ENSGALG00000013637	TDP2	69	54.054	ENSAPEG00000004208	-	92	54.054	Amphiprion_percula
ENSGALG00000013637	TDP2	75	50.719	ENSATEG00000010663	-	89	50.725	Anabas_testudineus
ENSGALG00000013637	TDP2	100	61.662	ENSACAG00000002332	TDP2	100	61.930	Anolis_carolinensis
ENSGALG00000013637	TDP2	92	64.912	ENSANAG00000020033	TDP2	94	64.912	Aotus_nancymaae
ENSGALG00000013637	TDP2	78	48.123	ENSACLG00000016174	tdp2b	93	50.362	Astatotilapia_calliptera
ENSGALG00000013637	TDP2	78	48.464	ENSACLG00000016132	tdp2b	93	50.725	Astatotilapia_calliptera
ENSGALG00000013637	TDP2	70	53.817	ENSACLG00000016148	tdp2b	93	53.817	Astatotilapia_calliptera
ENSGALG00000013637	TDP2	71	52.471	ENSAMXG00000036549	tdp2a	86	52.471	Astyanax_mexicanus
ENSGALG00000013637	TDP2	91	50.272	ENSAMXG00000011775	tdp2b	97	50.272	Astyanax_mexicanus
ENSGALG00000013637	TDP2	92	65.116	ENSBTAG00000000365	TDP2	94	65.306	Bos_taurus
ENSGALG00000013637	TDP2	89	32.635	WBGene00013405	tdpt-1	86	33.533	Caenorhabditis_elegans
ENSGALG00000013637	TDP2	92	64.620	ENSCJAG00000006074	TDP2	91	70.144	Callithrix_jacchus
ENSGALG00000013637	TDP2	92	64.327	ENSCJAG00000021963	-	94	64.327	Callithrix_jacchus
ENSGALG00000013637	TDP2	97	61.838	ENSCAFG00000010428	TDP2	96	69.784	Canis_familiaris
ENSGALG00000013637	TDP2	75	69.784	ENSCAFG00020009994	TDP2	96	69.784	Canis_lupus_dingo
ENSGALG00000013637	TDP2	75	69.643	ENSCHIG00000015294	-	95	69.643	Capra_hircus
ENSGALG00000013637	TDP2	83	65.484	ENSTSYG00000037199	TDP2	100	65.806	Carlito_syrichta
ENSGALG00000013637	TDP2	92	67.449	ENSCPOG00000006390	TDP2	95	67.544	Cavia_porcellus
ENSGALG00000013637	TDP2	92	65.497	ENSCCAG00000022734	TDP2	91	70.863	Cebus_capucinus
ENSGALG00000013637	TDP2	92	65.205	ENSCATG00000022076	TDP2	91	70.144	Cercocebus_atys
ENSGALG00000013637	TDP2	95	66.006	ENSCLAG00000002072	TDP2	95	66.667	Chinchilla_lanigera
ENSGALG00000013637	TDP2	95	64.589	ENSCSAG00000007769	TDP2	95	64.912	Chlorocebus_sabaeus
ENSGALG00000013637	TDP2	99	67.374	ENSCPBG00000006551	TDP2	87	71.137	Chrysemys_picta_bellii
ENSGALG00000013637	TDP2	92	65.205	ENSCANG00000040122	TDP2	92	70.504	Colobus_angolensis_palliatus
ENSGALG00000013637	TDP2	92	59.238	ENSCGRG00001000384	Tdp2	91	59.118	Cricetulus_griseus_chok1gshd
ENSGALG00000013637	TDP2	92	57.771	ENSCGRG00000010250	Tdp2	94	57.771	Cricetulus_griseus_crigri
ENSGALG00000013637	TDP2	91	51.714	ENSCVAG00000003114	tdp2b	95	51.714	Cyprinodon_variegatus
ENSGALG00000013637	TDP2	66	51.429	ENSDARG00000069941	tdp2a	55	51.429	Danio_rerio
ENSGALG00000013637	TDP2	92	50.000	ENSDARG00000035954	tdp2b	96	48.907	Danio_rerio
ENSGALG00000013637	TDP2	96	62.817	ENSDNOG00000044082	TDP2	93	63.636	Dasypus_novemcinctus
ENSGALG00000013637	TDP2	75	68.705	ENSETEG00000019096	TDP2	100	68.705	Echinops_telfairi
ENSGALG00000013637	TDP2	75	47.292	ENSEBUG00000006535	tdp2a	65	47.292	Eptatretus_burgeri
ENSGALG00000013637	TDP2	92	64.912	ENSEASG00005007656	TDP2	94	64.912	Equus_asinus_asinus
ENSGALG00000013637	TDP2	92	64.912	ENSECAG00000014264	TDP2	94	64.912	Equus_caballus
ENSGALG00000013637	TDP2	92	64.706	ENSEEUG00000010776	TDP2	94	64.118	Erinaceus_europaeus
ENSGALG00000013637	TDP2	91	50.273	ENSELUG00000016449	tdp2b	96	50.546	Esox_lucius
ENSGALG00000013637	TDP2	73	50.186	ENSELUG00000009321	tdp2a	84	50.186	Esox_lucius
ENSGALG00000013637	TDP2	95	63.920	ENSFCAG00000025612	TDP2	94	64.912	Felis_catus
ENSGALG00000013637	TDP2	93	71.594	ENSFALG00000004710	TDP2	99	70.704	Ficedula_albicollis
ENSGALG00000013637	TDP2	75	69.424	ENSFDAG00000006512	TDP2	96	69.424	Fukomys_damarensis
ENSGALG00000013637	TDP2	67	55.159	ENSFHEG00000013560	-	86	55.159	Fundulus_heteroclitus
ENSGALG00000013637	TDP2	99	69.293	ENSGAGG00000002853	TDP2	92	69.293	Gopherus_agassizii
ENSGALG00000013637	TDP2	92	64.620	ENSGGOG00000014237	TDP2	91	69.424	Gorilla_gorilla
ENSGALG00000013637	TDP2	53	56.345	ENSHBUG00000005421	-	82	56.345	Haplochromis_burtoni
ENSGALG00000013637	TDP2	94	49.444	ENSHBUG00000002714	tdp2b	95	51.567	Haplochromis_burtoni
ENSGALG00000013637	TDP2	96	65.352	ENSHGLG00000008655	TDP2	95	66.667	Heterocephalus_glaber_female
ENSGALG00000013637	TDP2	96	65.634	ENSHGLG00100019087	TDP2	95	66.765	Heterocephalus_glaber_male
ENSGALG00000013637	TDP2	91	51.667	ENSIPUG00000013691	tdp2b	95	51.111	Ictalurus_punctatus
ENSGALG00000013637	TDP2	91	56.973	ENSJJAG00000021685	Tdp2	97	56.973	Jaculus_jaculus
ENSGALG00000013637	TDP2	70	52.874	ENSKMAG00000015485	-	84	52.874	Kryptolebias_marmoratus
ENSGALG00000013637	TDP2	92	60.286	ENSLACG00000008852	TDP2	95	59.599	Latimeria_chalumnae
ENSGALG00000013637	TDP2	75	61.818	ENSLOCG00000005817	tdp2b	99	61.818	Lepisosteus_oculatus
ENSGALG00000013637	TDP2	92	65.497	ENSLAFG00000002567	TDP2	97	65.205	Loxodonta_africana
ENSGALG00000013637	TDP2	92	65.205	ENSMFAG00000045296	TDP2	91	70.504	Macaca_fascicularis
ENSGALG00000013637	TDP2	92	65.205	ENSMMUG00000009803	TDP2	95	65.205	Macaca_mulatta
ENSGALG00000013637	TDP2	92	65.205	ENSMNEG00000038003	TDP2	91	70.504	Macaca_nemestrina
ENSGALG00000013637	TDP2	92	65.205	ENSMLEG00000028883	TDP2	91	70.144	Mandrillus_leucophaeus
ENSGALG00000013637	TDP2	90	52.522	ENSMAMG00000013654	tdp2b	95	52.023	Mastacembelus_armatus
ENSGALG00000013637	TDP2	78	48.454	ENSMZEG00005004126	tdp2b	93	50.730	Maylandia_zebra
ENSGALG00000013637	TDP2	69	53.333	ENSMZEG00005004055	tdp2b	84	53.333	Maylandia_zebra
ENSGALG00000013637	TDP2	73	52.555	ENSMZEG00005004153	tdp2b	96	52.555	Maylandia_zebra
ENSGALG00000013637	TDP2	71	45.283	ENSMZEG00005003980	-	80	47.581	Maylandia_zebra
ENSGALG00000013637	TDP2	70	50.763	ENSMZEG00005004103	tdp2b	88	50.763	Maylandia_zebra
ENSGALG00000013637	TDP2	94	51.111	ENSMZEG00005003950	tdp2b	95	51.567	Maylandia_zebra
ENSGALG00000013637	TDP2	78	51.557	ENSMZEG00005004077	tdp2b	90	52.985	Maylandia_zebra
ENSGALG00000013637	TDP2	100	95.935	ENSMGAG00000008014	TDP2	99	95.935	Meleagris_gallopavo
ENSGALG00000013637	TDP2	92	58.944	ENSMAUG00000014451	Tdp2	98	57.143	Mesocricetus_auratus
ENSGALG00000013637	TDP2	96	62.849	ENSMICG00000000039	TDP2	95	69.534	Microcebus_murinus
ENSGALG00000013637	TDP2	92	60.174	ENSMOCG00000002823	Tdp2	97	58.197	Microtus_ochrogaster
ENSGALG00000013637	TDP2	83	60.000	ENSMODG00000011653	TDP2	95	60.064	Monodelphis_domestica
ENSGALG00000013637	TDP2	75	50.714	ENSMALG00000005368	-	85	53.360	Monopterus_albus
ENSGALG00000013637	TDP2	94	59.551	MGP_CAROLIEiJ_G0018354	Tdp2	98	57.766	Mus_caroli
ENSGALG00000013637	TDP2	98	57.724	ENSMUSG00000035958	Tdp2	98	57.692	Mus_musculus
ENSGALG00000013637	TDP2	94	58.427	MGP_PahariEiJ_G0019417	Tdp2	91	58.892	Mus_pahari
ENSGALG00000013637	TDP2	98	58.021	MGP_SPRETEiJ_G0019220	Tdp2	98	57.221	Mus_spretus
ENSGALG00000013637	TDP2	92	62.099	ENSMPUG00000004516	TDP2	95	62.281	Mustela_putorius_furo
ENSGALG00000013637	TDP2	92	60.350	ENSMLUG00000013506	TDP2	95	60.350	Myotis_lucifugus
ENSGALG00000013637	TDP2	99	55.405	ENSNGAG00000001375	Tdp2	91	56.433	Nannospalax_galili
ENSGALG00000013637	TDP2	92	64.327	ENSNLEG00000002447	TDP2	96	64.327	Nomascus_leucogenys
ENSGALG00000013637	TDP2	95	65.254	ENSOPRG00000016299	TDP2	97	65.205	Ochotona_princeps
ENSGALG00000013637	TDP2	75	70.504	ENSODEG00000014018	TDP2	95	70.504	Octodon_degus
ENSGALG00000013637	TDP2	98	63.462	ENSOCUG00000013773	TDP2	94	65.205	Oryctolagus_cuniculus
ENSGALG00000013637	TDP2	72	50.000	ENSORLG00000001661	-	98	50.000	Oryzias_latipes
ENSGALG00000013637	TDP2	72	50.000	ENSORLG00020004634	-	98	50.000	Oryzias_latipes_hni
ENSGALG00000013637	TDP2	68	46.275	ENSORLG00015008190	-	92	46.275	Oryzias_latipes_hsok
ENSGALG00000013637	TDP2	75	48.551	ENSOMEG00000015899	-	93	50.794	Oryzias_melastigma
ENSGALG00000013637	TDP2	99	60.976	ENSOGAG00000025303	TDP2	93	62.865	Otolemur_garnettii
ENSGALG00000013637	TDP2	92	64.912	ENSPPAG00000029023	TDP2	92	70.144	Pan_paniscus
ENSGALG00000013637	TDP2	95	63.352	ENSPPRG00000015398	TDP2	94	64.327	Panthera_pardus
ENSGALG00000013637	TDP2	76	67.845	ENSPTIG00000018574	TDP2	95	68.345	Panthera_tigris_altaica
ENSGALG00000013637	TDP2	92	64.912	ENSPTRG00000017778	TDP2	91	70.144	Pan_troglodytes
ENSGALG00000013637	TDP2	92	64.912	ENSPANG00000017590	TDP2	91	70.144	Papio_anubis
ENSGALG00000013637	TDP2	91	52.571	ENSPKIG00000006483	tdp2b	95	52.571	Paramormyrops_kingsleyae
ENSGALG00000013637	TDP2	75	74.638	ENSPSIG00000004948	TDP2	96	74.638	Pelodiscus_sinensis
ENSGALG00000013637	TDP2	92	59.531	ENSPEMG00000001788	Tdp2	91	59.706	Peromyscus_maniculatus_bairdii
ENSGALG00000013637	TDP2	68	45.693	ENSPMAG00000001570	tdp2b	97	46.442	Petromyzon_marinus
ENSGALG00000013637	TDP2	92	62.751	ENSPCIG00000007316	TDP2	89	62.974	Phascolarctos_cinereus
ENSGALG00000013637	TDP2	76	50.526	ENSPFOG00000017990	-	91	54.150	Poecilia_formosa
ENSGALG00000013637	TDP2	68	53.755	ENSPLAG00000019439	-	80	53.755	Poecilia_latipinna
ENSGALG00000013637	TDP2	68	54.545	ENSPMEG00000010824	-	85	54.545	Poecilia_mexicana
ENSGALG00000013637	TDP2	92	63.743	ENSPPYG00000016282	TDP2	87	63.450	Pongo_abelii
ENSGALG00000013637	TDP2	92	65.103	ENSPCOG00000021415	TDP2	98	70.504	Propithecus_coquereli
ENSGALG00000013637	TDP2	94	50.278	ENSPNYG00000011532	tdp2b	95	50.712	Pundamilia_nyererei
ENSGALG00000013637	TDP2	75	48.475	ENSPNYG00000011504	tdp2b	94	48.621	Pundamilia_nyererei
ENSGALG00000013637	TDP2	70	54.615	ENSPNAG00000022162	tdp2a	66	54.615	Pygocentrus_nattereri
ENSGALG00000013637	TDP2	92	61.047	ENSRNOG00000018246	Tdp2	92	61.224	Rattus_norvegicus
ENSGALG00000013637	TDP2	92	65.497	ENSRBIG00000037119	TDP2	92	70.504	Rhinopithecus_bieti
ENSGALG00000013637	TDP2	92	65.205	ENSRROG00000005025	TDP2	92	70.144	Rhinopithecus_roxellana
ENSGALG00000013637	TDP2	98	63.462	ENSSBOG00000028734	TDP2	91	71.223	Saimiri_boliviensis_boliviensis
ENSGALG00000013637	TDP2	95	62.606	ENSSHAG00000002506	TDP2	95	60.108	Sarcophilus_harrisii
ENSGALG00000013637	TDP2	69	51.181	ENSSFOG00015011322	-	71	51.181	Scleropages_formosus
ENSGALG00000013637	TDP2	75	66.308	ENSSARG00000013547	TDP2	100	66.308	Sorex_araneus
ENSGALG00000013637	TDP2	93	62.535	ENSSPUG00000008288	TDP2	99	61.308	Sphenodon_punctatus
ENSGALG00000013637	TDP2	92	64.620	ENSSSCG00000001092	TDP2	94	64.620	Sus_scrofa
ENSGALG00000013637	TDP2	70	79.151	ENSTGUG00000009035	TDP2	99	79.151	Taeniopygia_guttata
ENSGALG00000013637	TDP2	69	54.651	ENSTRUG00000012218	-	89	54.651	Takifugu_rubripes
ENSGALG00000013637	TDP2	92	50.992	ENSTRUG00000014347	tdp2b	96	50.992	Takifugu_rubripes
ENSGALG00000013637	TDP2	92	51.549	ENSTNIG00000017792	tdp2b	96	51.549	Tetraodon_nigroviridis
ENSGALG00000013637	TDP2	68	55.469	ENSTNIG00000010260	TDP2	97	55.469	Tetraodon_nigroviridis
ENSGALG00000013637	TDP2	92	64.620	ENSTTRG00000016376	TDP2	94	65.103	Tursiops_truncatus
ENSGALG00000013637	TDP2	97	59.167	ENSUAMG00000025939	TDP2	95	60.234	Ursus_americanus
ENSGALG00000013637	TDP2	75	67.626	ENSUMAG00000020111	TDP2	93	67.626	Ursus_maritimus
ENSGALG00000013637	TDP2	93	59.610	ENSXETG00000014826	tdp2	94	58.659	Xenopus_tropicalis
ENSGALG00000013637	TDP2	68	54.331	ENSXCOG00000010778	-	70	54.331	Xiphophorus_couchianus
ENSGALG00000013637	TDP2	68	54.724	ENSXMAG00000022252	-	73	54.724	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000287	magnesium ion binding	-	ISS	Function
GO:0003697	single-stranded DNA binding	21873635.	IBA	Function
GO:0003697	single-stranded DNA binding	-	ISS	Function
GO:0004518	nuclease activity	-	IEA	Function
GO:0005654	nucleoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006302	double-strand break repair	21873635.	IBA	Process
GO:0006302	double-strand break repair	-	ISS	Process
GO:0016235	aggresome	-	IEA	Component
GO:0016605	PML body	21873635.	IBA	Component
GO:0030145	manganese ion binding	-	ISS	Function
GO:0036317	tyrosyl-RNA phosphodiesterase activity	-	IEA	Function
GO:0048666	neuron development	-	IEA	Process
GO:0070260	5'-tyrosyl-DNA phosphodiesterase activity	21873635.	IBA	Function
GO:0070260	5'-tyrosyl-DNA phosphodiesterase activity	-	ISS	Function
GO:0090305	nucleic acid phosphodiester bond hydrolysis	-	IEA	Process