EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000013943 (Gene tree)
Gene ID: 422754
Gene Symbol: -
Alias: -
Full Name: factor interacting with PAPOLA and CPSF1
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 37361 bases
Position: chr4:65720701-65758061
Accession: 422754
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000058270	Fip1	PF05182.13	7.6e-25	1	1
ENSGALP00000022557	Fip1	PF05182.13	8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000082520	-	1737	-	ENSGALP00000058270	522 (aa)	XP_015141021	A0A1D5PZ61
ENSGALT00000022597	-	1806	-	ENSGALP00000022557	545 (aa)	-	E1BWP4

Gene Model

Click here to download ENSGALG00000013943's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000013943's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000013943	-	69	79.787	ENSACIG00000001454	fip1l1b	96	75.532	Amphilophus_citrinellus
ENSGALG00000013943	-	99	57.411	ENSAPEG00000022229	fip1l1b	99	59.930	Amphiprion_percula
ENSGALG00000013943	-	99	62.182	ENSATEG00000021757	fip1l1b	99	61.091	Anabas_testudineus
ENSGALG00000013943	-	93	80.000	ENSAPLG00000003042	-	98	80.000	Anas_platyrhynchos
ENSGALG00000013943	-	92	86.598	ENSACAG00000010556	-	84	86.598	Anolis_carolinensis
ENSGALG00000013943	-	99	61.706	ENSACLG00000010418	fip1l1b	99	61.525	Astatotilapia_calliptera
ENSGALG00000013943	-	54	58.255	ENSAMXG00000011126	fip1l1b	89	60.424	Astyanax_mexicanus
ENSGALG00000013943	-	51	38.194	ENSAMXG00000031045	fip1l1a	77	42.264	Astyanax_mexicanus
ENSGALG00000013943	-	100	83.647	ENSBTAG00000020653	FIP1L1	100	83.459	Bos_taurus
ENSGALG00000013943	-	100	82.883	ENSCHIG00000025903	-	100	82.703	Capra_hircus
ENSGALG00000013943	-	93	70.672	ENSCAPG00000009569	-	87	86.134	Cavia_aperea
ENSGALG00000013943	-	92	85.947	ENSCPOG00000010770	-	94	85.132	Cavia_porcellus
ENSGALG00000013943	-	100	89.224	ENSCPBG00000025019	-	100	87.978	Chrysemys_picta_bellii
ENSGALG00000013943	-	100	82.418	ENSCGRG00001018568	Fip1l1	100	82.418	Cricetulus_griseus_chok1gshd
ENSGALG00000013943	-	100	82.418	ENSCGRG00000000208	Fip1l1	100	82.418	Cricetulus_griseus_crigri
ENSGALG00000013943	-	99	61.243	ENSCSEG00000006583	fip1l1b	99	60.329	Cynoglossus_semilaevis
ENSGALG00000013943	-	99	61.372	ENSCVAG00000023435	fip1l1b	99	59.928	Cyprinodon_variegatus
ENSGALG00000013943	-	99	55.556	ENSDARG00000070431	fip1l1b	81	59.792	Danio_rerio
ENSGALG00000013943	-	82	76.289	ENSETEG00000018271	-	99	66.362	Echinops_telfairi
ENSGALG00000013943	-	100	72.193	ENSEASG00005019566	-	100	80.075	Equus_asinus_asinus
ENSGALG00000013943	-	72	74.346	ENSEEUG00000004965	-	66	74.869	Erinaceus_europaeus
ENSGALG00000013943	-	99	49.634	ENSELUG00000004607	fip1l1a	68	57.025	Esox_lucius
ENSGALG00000013943	-	67	59.174	ENSELUG00000001280	fip1l1b	76	58.904	Esox_lucius
ENSGALG00000013943	-	99	60.142	ENSFHEG00000003843	fip1l1b	99	59.253	Fundulus_heteroclitus
ENSGALG00000013943	-	99	51.761	ENSGMOG00000004913	fip1l1b	99	52.021	Gadus_morhua
ENSGALG00000013943	-	61	37.500	ENSGMOG00000012065	-	53	40.838	Gadus_morhua
ENSGALG00000013943	-	99	59.894	ENSGAFG00000008253	fip1l1b	99	59.894	Gambusia_affinis
ENSGALG00000013943	-	99	52.027	ENSGACG00000015946	fip1l1b	99	51.261	Gasterosteus_aculeatus
ENSGALG00000013943	-	100	89.655	ENSGAGG00000009763	-	100	88.342	Gopherus_agassizii
ENSGALG00000013943	-	99	61.706	ENSHBUG00000013978	fip1l1b	99	61.525	Haplochromis_burtoni
ENSGALG00000013943	-	99	61.982	ENSHCOG00000015834	fip1l1b	99	62.523	Hippocampus_comes
ENSGALG00000013943	-	96	53.788	ENSIPUG00000022454	fip1l1b	62	56.766	Ictalurus_punctatus
ENSGALG00000013943	-	99	60.289	ENSKMAG00000021938	fip1l1b	99	60.289	Kryptolebias_marmoratus
ENSGALG00000013943	-	99	57.597	ENSLBEG00000028819	fip1l1b	99	60.071	Labrus_bergylta
ENSGALG00000013943	-	96	69.380	ENSLACG00000011991	fip1l1a	99	68.657	Latimeria_chalumnae
ENSGALG00000013943	-	99	59.930	ENSLOCG00000014127	fip1l1b	99	60.035	Lepisosteus_oculatus
ENSGALG00000013943	-	99	62.000	ENSMAMG00000004535	fip1l1b	99	62.909	Mastacembelus_armatus
ENSGALG00000013943	-	99	61.706	ENSMZEG00005023828	fip1l1b	99	61.525	Maylandia_zebra
ENSGALG00000013943	-	95	96.032	ENSMGAG00000011885	-	100	96.032	Meleagris_gallopavo
ENSGALG00000013943	-	100	76.882	ENSMAUG00000010526	Fip1l1	100	76.882	Mesocricetus_auratus
ENSGALG00000013943	-	100	80.037	ENSMOCG00000008020	Fip1l1	100	80.403	Microtus_ochrogaster
ENSGALG00000013943	-	74	75.333	ENSMODG00000020654	-	84	76.000	Monodelphis_domestica
ENSGALG00000013943	-	99	49.824	ENSMALG00000000838	fip1l1b	55	51.536	Monopterus_albus
ENSGALG00000013943	-	100	82.234	MGP_CAROLIEiJ_G0027304	Fip1l1	100	82.234	Mus_caroli
ENSGALG00000013943	-	100	82.234	ENSMUSG00000029227	Fip1l1	100	82.234	Mus_musculus
ENSGALG00000013943	-	100	82.234	MGP_PahariEiJ_G0017085	Fip1l1	100	82.234	Mus_pahari
ENSGALG00000013943	-	100	82.234	MGP_SPRETEiJ_G0028299	Fip1l1	100	82.234	Mus_spretus
ENSGALG00000013943	-	100	82.234	ENSNGAG00000008849	Fip1l1	100	81.502	Nannospalax_galili
ENSGALG00000013943	-	99	59.754	ENSNBRG00000017832	fip1l1b	99	59.578	Neolamprologus_brichardi
ENSGALG00000013943	-	99	59.227	ENSONIG00000008785	fip1l1b	99	59.051	Oreochromis_niloticus
ENSGALG00000013943	-	93	69.946	ENSOANG00000003384	-	98	68.694	Ornithorhynchus_anatinus
ENSGALG00000013943	-	99	60.870	ENSORLG00000004397	fip1l1b	99	60.326	Oryzias_latipes
ENSGALG00000013943	-	99	61.051	ENSORLG00020008716	fip1l1b	99	60.507	Oryzias_latipes_hni
ENSGALG00000013943	-	99	61.232	ENSORLG00015006736	fip1l1b	99	60.870	Oryzias_latipes_hsok
ENSGALG00000013943	-	99	44.464	ENSOMEG00000015730	fip1l1b	99	41.003	Oryzias_melastigma
ENSGALG00000013943	-	99	53.874	ENSPMGG00000017028	fip1l1b	53	56.552	Periophthalmus_magnuspinnatus
ENSGALG00000013943	-	100	81.868	ENSPEMG00000002025	Fip1l1	100	81.868	Peromyscus_maniculatus_bairdii
ENSGALG00000013943	-	54	73.273	ENSPCIG00000019318	-	96	73.684	Phascolarctos_cinereus
ENSGALG00000013943	-	99	59.043	ENSPFOG00000014745	fip1l1b	99	59.929	Poecilia_formosa
ENSGALG00000013943	-	99	58.082	ENSPLAG00000010954	fip1l1b	99	60.036	Poecilia_latipinna
ENSGALG00000013943	-	99	59.220	ENSPMEG00000019187	fip1l1b	99	60.106	Poecilia_mexicana
ENSGALG00000013943	-	75	51.707	ENSPREG00000012535	fip1l1b	81	51.378	Poecilia_reticulata
ENSGALG00000013943	-	54	57.453	ENSPNYG00000015976	fip1l1b	82	58.333	Pundamilia_nyererei
ENSGALG00000013943	-	58	45.283	ENSPNAG00000009853	fip1l1a	76	44.737	Pygocentrus_nattereri
ENSGALG00000013943	-	54	57.862	ENSPNAG00000015341	fip1l1b	69	58.766	Pygocentrus_nattereri
ENSGALG00000013943	-	51	43.793	ENSPNAG00000007456	-	50	47.566	Pygocentrus_nattereri
ENSGALG00000013943	-	100	79.670	ENSRNOG00000002275	Fip1l1	100	80.037	Rattus_norvegicus
ENSGALG00000013943	-	95	74.867	ENSSHAG00000015789	-	96	74.513	Sarcophilus_harrisii
ENSGALG00000013943	-	50	52.128	ENSSFOG00015010948	-	75	52.128	Scleropages_formosus
ENSGALG00000013943	-	99	59.745	ENSSMAG00000013444	fip1l1b	99	61.020	Scophthalmus_maximus
ENSGALG00000013943	-	99	60.980	ENSSDUG00000004117	fip1l1b	99	62.069	Seriola_dumerili
ENSGALG00000013943	-	99	61.273	ENSSLDG00000024099	fip1l1b	99	62.909	Seriola_lalandi_dorsalis
ENSGALG00000013943	-	87	81.959	ENSSARG00000001973	-	89	81.959	Sorex_araneus
ENSGALG00000013943	-	51	78.868	ENSSPUG00000017328	-	92	81.132	Sphenodon_punctatus
ENSGALG00000013943	-	99	58.875	ENSSPAG00000017564	fip1l1b	99	60.105	Stegastes_partitus
ENSGALG00000013943	-	99	59.132	ENSTRUG00000001545	fip1l1b	99	59.132	Takifugu_rubripes
ENSGALG00000013943	-	99	54.485	ENSTNIG00000004104	fip1l1b	99	54.319	Tetraodon_nigroviridis
ENSGALG00000013943	-	82	80.412	ENSUMAG00000002758	-	99	81.605	Ursus_maritimus
ENSGALG00000013943	-	80	81.959	ENSVPAG00000011574	-	84	81.959	Vicugna_pacos
ENSGALG00000013943	-	99	50.000	ENSXCOG00000013656	fip1l1b	63	62.132	Xiphophorus_couchianus
ENSGALG00000013943	-	99	60.036	ENSXMAG00000017620	fip1l1b	99	59.680	Xiphophorus_maculatus