EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000014891 (Gene tree)
Gene ID: 430689
Gene Symbol: ITGA1
Alias: -
Full Name: Gallus gallus integrin subunit alpha 1 (ITGA1)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 72700 bases
Position: chrZ:15771673-15844372
Accession: NM_205069
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000035186	eRF1_2	PF03464.15	1.8e-36	1	1
ENSGALP00000035186	eRF1_3	PF03465.15	5.1e-26	1	1
ENSGALP00000035186	eRF1_1	PF03463.15	1.1e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000035958	-	1803	-	ENSGALP00000035186	385 (aa)	-	H9L2N7
ENSGALT00000032856	-	3926	-	ENSGALP00000032219	1171 (aa)	-	E1C0V6
ENSGALT00000024022	-	3745	-	ENSGALP00000023976	1175 (aa)	-	F1N8Z0

Gene Model

Click here to download ENSGALG00000014891's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03015	mRNA surveillance pathway	KEGG
gga04510	Focal adhesion	KEGG
gga04512	ECM-receptor interaction	KEGG
gga04810	Regulation of actin cytoskeleton	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000014891's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000014891	ITGA1	100	94.545	ENSECAG00000017386	ITGA1	100	94.545	Equus_caballus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0007155	cell adhesion	-	IEA	Process
GO:0007229	integrin-mediated signaling pathway	-	IEA	Process
GO:0008285	negative regulation of cell proliferation	-	ISS	Process
GO:0016021	integral component of membrane	-	IEA	Component
GO:0032516	positive regulation of phosphoprotein phosphatase activity	-	ISS	Process
GO:0042059	negative regulation of epidermal growth factor receptor signaling pathway	-	ISS	Process
GO:0004519	endonuclease activity	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0007049	cell cycle	-	IEA	Process
GO:0032790	ribosome disassembly	21873635.	IBA	Process
GO:0043022	ribosome binding	21873635.	IBA	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0051301	cell division	-	IEA	Process
GO:0070481	nuclear-transcribed mRNA catabolic process, non-stop decay	-	IEA	Process
GO:0070651	nonfunctional rRNA decay	21873635.	IBA	Process
GO:0070966	nuclear-transcribed mRNA catabolic process, no-go decay	21873635.	IBA	Process
GO:0071025	RNA surveillance	-	IEA	Process
GO:0090305	nucleic acid phosphodiester bond hydrolysis	-	IEA	Process