EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000015267 (Gene tree)
Gene ID: 418381
Gene Symbol: CMSS1
Alias: C1H3ORF26|C3orf26
Full Name: cms1 ribosomal small subunit homolog (yeast)
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 226954 bases
Position: chr1:85718934-85945887
Accession: 418381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000070134	CMS1	PF14617.6	2.3e-30	1	1
ENSGALP00000065103	CMS1	PF14617.6	2.5e-30	1	1
ENSGALP00000024598	CMS1	PF14617.6	2.5e-30	1	1
ENSGALP00000051279	CMS1	PF14617.6	2.7e-30	1	1
ENSGALP00000065103	DEAD	PF00270.29	7.2e-06	1	1
ENSGALP00000070134	DEAD	PF00270.29	7.4e-06	1	1
ENSGALP00000051279	DEAD	PF00270.29	7.4e-06	1	1
ENSGALP00000024598	DEAD	PF00270.29	7.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000068533	CMSS1-202	1474	-	ENSGALP00000051279	264 (aa)	-	A0A1D5PES1
ENSGALT00000024644	CMSS1-204	1145	-	ENSGALP00000024598	267 (aa)	XP_004938304	F1NQL6
ENSGALT00000100753	CMSS1-203	1265	-	ENSGALP00000070134	263 (aa)	-	-
ENSGALT00000091775	CMSS1-201	2123	-	ENSGALP00000065103	261 (aa)	-	-

Gene Model

Click here to download ENSGALG00000015267's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000015267's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000015267	CMSS1	100	62.977	ENSG00000184220	CMSS1	99	72.840	Homo_sapiens
ENSGALG00000015267	CMSS1	77	64.356	ENSAPOG00000010604	cmss1	82	64.356	Acanthochromis_polyacanthus
ENSGALG00000015267	CMSS1	100	63.359	ENSAMEG00000004092	CMSS1	100	63.359	Ailuropoda_melanoleuca
ENSGALG00000015267	CMSS1	77	54.950	ENSACIG00000021854	cmss1	75	55.446	Amphilophus_citrinellus
ENSGALG00000015267	CMSS1	77	63.366	ENSAOCG00000013361	cmss1	70	63.366	Amphiprion_ocellaris
ENSGALG00000015267	CMSS1	77	63.366	ENSAPEG00000005829	cmss1	70	63.366	Amphiprion_percula
ENSGALG00000015267	CMSS1	79	64.563	ENSATEG00000008209	cmss1	97	54.887	Anabas_testudineus
ENSGALG00000015267	CMSS1	88	93.043	ENSAPLG00000010542	CMSS1	100	93.043	Anas_platyrhynchos
ENSGALG00000015267	CMSS1	100	70.301	ENSACAG00000011065	CMSS1	98	70.037	Anolis_carolinensis
ENSGALG00000015267	CMSS1	100	62.879	ENSANAG00000023565	CMSS1	100	62.879	Aotus_nancymaae
ENSGALG00000015267	CMSS1	77	64.356	ENSACLG00000027294	cmss1	69	64.356	Astatotilapia_calliptera
ENSGALG00000015267	CMSS1	87	58.696	ENSAMXG00000002046	cmss1	89	54.511	Astyanax_mexicanus
ENSGALG00000015267	CMSS1	95	65.462	ENSBTAG00000013663	CMSS1	98	62.593	Bos_taurus
ENSGALG00000015267	CMSS1	100	64.751	ENSCJAG00000000610	CMSS1	100	64.394	Callithrix_jacchus
ENSGALG00000015267	CMSS1	100	63.985	ENSCAFG00000009230	CMSS1	94	63.740	Canis_familiaris
ENSGALG00000015267	CMSS1	99	63.878	ENSCAFG00020009464	-	86	68.220	Canis_lupus_dingo
ENSGALG00000015267	CMSS1	81	66.359	ENSCAFG00020024156	-	62	67.822	Canis_lupus_dingo
ENSGALG00000015267	CMSS1	99	64.615	ENSCHIG00000013003	CMSS1	94	64.122	Capra_hircus
ENSGALG00000015267	CMSS1	100	62.835	ENSTSYG00000009266	CMSS1	99	62.835	Carlito_syrichta
ENSGALG00000015267	CMSS1	85	58.296	ENSCAPG00000013584	CMSS1	87	62.903	Cavia_aperea
ENSGALG00000015267	CMSS1	100	65.267	ENSCPOG00000014680	CMSS1	93	65.152	Cavia_porcellus
ENSGALG00000015267	CMSS1	100	63.985	ENSCCAG00000034685	CMSS1	100	63.636	Cebus_capucinus
ENSGALG00000015267	CMSS1	100	62.977	ENSCATG00000031980	CMSS1	100	62.642	Cercocebus_atys
ENSGALG00000015267	CMSS1	88	68.996	ENSCLAG00000011241	CMSS1	98	68.996	Chinchilla_lanigera
ENSGALG00000015267	CMSS1	90	67.521	ENSCSAG00000006024	CMSS1	94	68.696	Chlorocebus_sabaeus
ENSGALG00000015267	CMSS1	99	46.241	ENSCHOG00000012098	CMSS1	96	46.241	Choloepus_hoffmanni
ENSGALG00000015267	CMSS1	75	40.909	ENSCING00000014848	-	99	41.711	Ciona_intestinalis
ENSGALG00000015267	CMSS1	100	62.595	ENSCANG00000031337	CMSS1	88	68.261	Colobus_angolensis_palliatus
ENSGALG00000015267	CMSS1	90	67.094	ENSCGRG00001014305	Cmss1	84	67.094	Cricetulus_griseus_chok1gshd
ENSGALG00000015267	CMSS1	90	67.521	ENSCGRG00000006722	Cmss1	91	67.521	Cricetulus_griseus_crigri
ENSGALG00000015267	CMSS1	77	67.822	ENSCSEG00000004958	cmss1	95	56.115	Cynoglossus_semilaevis
ENSGALG00000015267	CMSS1	77	63.366	ENSCVAG00000005039	cmss1	70	63.366	Cyprinodon_variegatus
ENSGALG00000015267	CMSS1	87	55.844	ENSDARG00000112579	cmss1	87	53.668	Danio_rerio
ENSGALG00000015267	CMSS1	100	62.642	ENSDNOG00000040418	CMSS1	93	61.940	Dasypus_novemcinctus
ENSGALG00000015267	CMSS1	90	68.220	ENSDORG00000010461	Cmss1	85	68.220	Dipodomys_ordii
ENSGALG00000015267	CMSS1	51	46.970	ENSEBUG00000002156	-	96	46.970	Eptatretus_burgeri
ENSGALG00000015267	CMSS1	96	63.953	ENSEASG00005010966	CMSS1	99	68.950	Equus_asinus_asinus
ENSGALG00000015267	CMSS1	100	63.498	ENSECAG00000015662	CMSS1	99	68.584	Equus_caballus
ENSGALG00000015267	CMSS1	87	48.684	ENSEEUG00000007624	-	82	48.684	Erinaceus_europaeus
ENSGALG00000015267	CMSS1	77	61.881	ENSELUG00000019459	cmss1	92	52.708	Esox_lucius
ENSGALG00000015267	CMSS1	99	64.751	ENSFCAG00000044577	CMSS1	96	63.806	Felis_catus
ENSGALG00000015267	CMSS1	88	88.210	ENSFALG00000005816	CMSS1	97	88.210	Ficedula_albicollis
ENSGALG00000015267	CMSS1	87	67.544	ENSFDAG00000012577	CMSS1	100	67.544	Fukomys_damarensis
ENSGALG00000015267	CMSS1	87	58.009	ENSFHEG00000012008	cmss1	95	58.696	Fundulus_heteroclitus
ENSGALG00000015267	CMSS1	77	61.881	ENSGMOG00000016729	cmss1	72	61.881	Gadus_morhua
ENSGALG00000015267	CMSS1	79	62.802	ENSGAFG00000021217	cmss1	77	62.376	Gambusia_affinis
ENSGALG00000015267	CMSS1	82	62.150	ENSGACG00000002798	cmss1	96	54.478	Gasterosteus_aculeatus
ENSGALG00000015267	CMSS1	100	76.226	ENSGAGG00000019861	CMSS1	99	77.165	Gopherus_agassizii
ENSGALG00000015267	CMSS1	100	63.740	ENSGGOG00000014125	CMSS1	100	63.396	Gorilla_gorilla
ENSGALG00000015267	CMSS1	77	64.356	ENSHBUG00000008431	cmss1	71	64.356	Haplochromis_burtoni
ENSGALG00000015267	CMSS1	87	69.912	ENSHGLG00000019481	CMSS1	92	69.912	Heterocephalus_glaber_female
ENSGALG00000015267	CMSS1	87	69.912	ENSHGLG00100010314	CMSS1	91	69.912	Heterocephalus_glaber_male
ENSGALG00000015267	CMSS1	77	63.861	ENSHCOG00000003222	cmss1	81	60.417	Hippocampus_comes
ENSGALG00000015267	CMSS1	93	57.317	ENSIPUG00000011591	cmss1	92	54.815	Ictalurus_punctatus
ENSGALG00000015267	CMSS1	100	63.218	ENSSTOG00000019366	CMSS1	96	62.406	Ictidomys_tridecemlineatus
ENSGALG00000015267	CMSS1	99	64.231	ENSJJAG00000014894	Cmss1	90	69.307	Jaculus_jaculus
ENSGALG00000015267	CMSS1	93	52.869	ENSKMAG00000002390	cmss1	99	52.419	Kryptolebias_marmoratus
ENSGALG00000015267	CMSS1	77	62.069	ENSLBEG00000006298	cmss1	98	55.118	Labrus_bergylta
ENSGALG00000015267	CMSS1	87	66.957	ENSLACG00000009293	CMSS1	100	66.957	Latimeria_chalumnae
ENSGALG00000015267	CMSS1	99	55.639	ENSLOCG00000009391	cmss1	94	55.762	Lepisosteus_oculatus
ENSGALG00000015267	CMSS1	87	67.544	ENSLAFG00000017509	CMSS1	100	67.544	Loxodonta_africana
ENSGALG00000015267	CMSS1	100	63.359	ENSMFAG00000045006	CMSS1	100	63.019	Macaca_fascicularis
ENSGALG00000015267	CMSS1	100	62.977	ENSMMUG00000002939	CMSS1	98	69.091	Macaca_mulatta
ENSGALG00000015267	CMSS1	100	63.359	ENSMNEG00000031315	CMSS1	100	63.019	Macaca_nemestrina
ENSGALG00000015267	CMSS1	100	63.359	ENSMLEG00000033660	CMSS1	100	63.019	Mandrillus_leucophaeus
ENSGALG00000015267	CMSS1	77	64.356	ENSMAMG00000017176	cmss1	95	53.091	Mastacembelus_armatus
ENSGALG00000015267	CMSS1	77	64.356	ENSMZEG00005021886	cmss1	69	64.356	Maylandia_zebra
ENSGALG00000015267	CMSS1	87	98.246	ENSMGAG00000014360	CMSS1	100	98.246	Meleagris_gallopavo
ENSGALG00000015267	CMSS1	90	47.436	ENSMAUG00000020609	Cmss1	80	47.436	Mesocricetus_auratus
ENSGALG00000015267	CMSS1	99	63.602	ENSMICG00000048977	CMSS1	99	63.953	Microcebus_murinus
ENSGALG00000015267	CMSS1	90	68.220	ENSMOCG00000021937	Cmss1	86	68.220	Microtus_ochrogaster
ENSGALG00000015267	CMSS1	77	62.376	ENSMMOG00000019794	cmss1	84	62.376	Mola_mola
ENSGALG00000015267	CMSS1	90	71.186	ENSMODG00000002275	CMSS1	89	71.186	Monodelphis_domestica
ENSGALG00000015267	CMSS1	77	66.337	ENSMALG00000004250	cmss1	83	61.826	Monopterus_albus
ENSGALG00000015267	CMSS1	95	62.891	MGP_CAROLIEiJ_G0020824	Cmss1	93	62.891	Mus_caroli
ENSGALG00000015267	CMSS1	95	62.891	ENSMUSG00000022748	Cmss1	93	62.891	Mus_musculus
ENSGALG00000015267	CMSS1	95	62.500	MGP_PahariEiJ_G0016524	Cmss1	93	62.500	Mus_pahari
ENSGALG00000015267	CMSS1	99	61.798	MGP_SPRETEiJ_G0021724	Cmss1	96	61.798	Mus_spretus
ENSGALG00000015267	CMSS1	99	64.639	ENSMPUG00000011324	CMSS1	100	64.639	Mustela_putorius_furo
ENSGALG00000015267	CMSS1	100	64.662	ENSMLUG00000001131	CMSS1	99	64.794	Myotis_lucifugus
ENSGALG00000015267	CMSS1	100	63.985	ENSNGAG00000020316	Cmss1	96	63.060	Nannospalax_galili
ENSGALG00000015267	CMSS1	77	64.356	ENSNBRG00000003095	cmss1	69	64.356	Neolamprologus_brichardi
ENSGALG00000015267	CMSS1	100	63.740	ENSNLEG00000034172	CMSS1	100	63.396	Nomascus_leucogenys
ENSGALG00000015267	CMSS1	87	63.158	ENSMEUG00000014505	CMSS1	100	63.158	Notamacropus_eugenii
ENSGALG00000015267	CMSS1	99	65.399	ENSOPRG00000002986	CMSS1	94	65.399	Ochotona_princeps
ENSGALG00000015267	CMSS1	98	61.569	ENSODEG00000003558	-	96	60.150	Octodon_degus
ENSGALG00000015267	CMSS1	99	54.231	ENSODEG00000001853	-	96	53.383	Octodon_degus
ENSGALG00000015267	CMSS1	100	63.602	ENSODEG00000005226	-	93	63.498	Octodon_degus
ENSGALG00000015267	CMSS1	84	58.257	ENSODEG00000009446	-	85	58.257	Octodon_degus
ENSGALG00000015267	CMSS1	77	63.366	ENSONIG00000006678	cmss1	77	63.366	Oreochromis_niloticus
ENSGALG00000015267	CMSS1	99	71.042	ENSOANG00000007529	CMSS1	100	75.107	Ornithorhynchus_anatinus
ENSGALG00000015267	CMSS1	100	64.368	ENSOCUG00000025366	CMSS1	94	64.122	Oryctolagus_cuniculus
ENSGALG00000015267	CMSS1	92	59.504	ENSORLG00000020340	cmss1	95	56.458	Oryzias_latipes
ENSGALG00000015267	CMSS1	88	54.585	ENSORLG00020012235	cmss1	85	56.931	Oryzias_latipes_hni
ENSGALG00000015267	CMSS1	77	56.931	ENSORLG00015015551	cmss1	75	56.931	Oryzias_latipes_hsok
ENSGALG00000015267	CMSS1	77	63.366	ENSOMEG00000012555	cmss1	70	63.366	Oryzias_melastigma
ENSGALG00000015267	CMSS1	87	67.544	ENSOGAG00000002045	CMSS1	100	67.544	Otolemur_garnettii
ENSGALG00000015267	CMSS1	99	64.751	ENSOARG00000017899	CMSS1	90	64.045	Ovis_aries
ENSGALG00000015267	CMSS1	100	63.740	ENSPPAG00000038515	CMSS1	97	63.296	Pan_paniscus
ENSGALG00000015267	CMSS1	100	64.368	ENSPPRG00000016767	CMSS1	96	63.433	Panthera_pardus
ENSGALG00000015267	CMSS1	100	64.751	ENSPTIG00000018274	CMSS1	96	63.806	Panthera_tigris_altaica
ENSGALG00000015267	CMSS1	100	63.602	ENSPTRG00000015157	CMSS1	97	67.511	Pan_troglodytes
ENSGALG00000015267	CMSS1	95	64.542	ENSPANG00000019980	CMSS1	96	65.702	Papio_anubis
ENSGALG00000015267	CMSS1	100	60.595	ENSPKIG00000012609	cmss1	99	60.595	Paramormyrops_kingsleyae
ENSGALG00000015267	CMSS1	88	84.279	ENSPSIG00000003849	CMSS1	100	84.279	Pelodiscus_sinensis
ENSGALG00000015267	CMSS1	77	64.039	ENSPMGG00000010286	cmss1	87	64.039	Periophthalmus_magnuspinnatus
ENSGALG00000015267	CMSS1	97	64.032	ENSPEMG00000016384	Cmss1	90	64.032	Peromyscus_maniculatus_bairdii
ENSGALG00000015267	CMSS1	78	53.431	ENSPMAG00000001146	cmss1	99	53.960	Petromyzon_marinus
ENSGALG00000015267	CMSS1	100	67.939	ENSPCIG00000015656	CMSS1	100	67.424	Phascolarctos_cinereus
ENSGALG00000015267	CMSS1	77	61.386	ENSPFOG00000016849	cmss1	71	61.386	Poecilia_formosa
ENSGALG00000015267	CMSS1	77	60.891	ENSPLAG00000008323	cmss1	71	60.891	Poecilia_latipinna
ENSGALG00000015267	CMSS1	77	61.386	ENSPMEG00000021020	cmss1	70	61.386	Poecilia_mexicana
ENSGALG00000015267	CMSS1	77	60.396	ENSPREG00000007618	cmss1	93	52.920	Poecilia_reticulata
ENSGALG00000015267	CMSS1	100	64.368	ENSPPYG00000013606	CMSS1	95	64.259	Pongo_abelii
ENSGALG00000015267	CMSS1	99	64.368	ENSPCOG00000020035	CMSS1	99	64.729	Propithecus_coquereli
ENSGALG00000015267	CMSS1	100	55.172	ENSPVAG00000017031	CMSS1	93	55.513	Pteropus_vampyrus
ENSGALG00000015267	CMSS1	67	67.045	ENSPNYG00000013428	cmss1	65	67.045	Pundamilia_nyererei
ENSGALG00000015267	CMSS1	98	54.023	ENSPNAG00000007912	cmss1	89	54.023	Pygocentrus_nattereri
ENSGALG00000015267	CMSS1	96	63.035	ENSRNOG00000027888	Cmss1	100	63.035	Rattus_norvegicus
ENSGALG00000015267	CMSS1	100	62.595	ENSRBIG00000037931	CMSS1	100	62.264	Rhinopithecus_bieti
ENSGALG00000015267	CMSS1	100	62.595	ENSRROG00000042910	CMSS1	100	62.264	Rhinopithecus_roxellana
ENSGALG00000015267	CMSS1	100	63.218	ENSSBOG00000030980	CMSS1	100	62.500	Saimiri_boliviensis_boliviensis
ENSGALG00000015267	CMSS1	88	73.362	ENSSHAG00000009321	CMSS1	91	73.362	Sarcophilus_harrisii
ENSGALG00000015267	CMSS1	87	63.913	ENSSFOG00015001509	cmss1	97	56.786	Scleropages_formosus
ENSGALG00000015267	CMSS1	77	66.337	ENSSMAG00000001653	cmss1	95	55.235	Scophthalmus_maximus
ENSGALG00000015267	CMSS1	97	56.489	ENSSDUG00000007719	cmss1	93	56.343	Seriola_dumerili
ENSGALG00000015267	CMSS1	79	65.217	ENSSLDG00000012300	cmss1	93	53.623	Seriola_lalandi_dorsalis
ENSGALG00000015267	CMSS1	90	57.627	ENSSARG00000003584	CMSS1	84	57.627	Sorex_araneus
ENSGALG00000015267	CMSS1	87	81.416	ENSSPUG00000003865	CMSS1	100	81.416	Sphenodon_punctatus
ENSGALG00000015267	CMSS1	79	66.505	ENSSPAG00000019182	cmss1	63	66.337	Stegastes_partitus
ENSGALG00000015267	CMSS1	99	62.687	ENSSSCG00000011970	CMSS1	96	62.687	Sus_scrofa
ENSGALG00000015267	CMSS1	88	88.646	ENSTGUG00000013635	CMSS1	100	88.646	Taeniopygia_guttata
ENSGALG00000015267	CMSS1	77	63.366	ENSTRUG00000015265	cmss1	94	54.135	Takifugu_rubripes
ENSGALG00000015267	CMSS1	77	58.416	ENSTNIG00000002880	cmss1	97	51.282	Tetraodon_nigroviridis
ENSGALG00000015267	CMSS1	87	48.246	ENSTBEG00000016722	CMSS1	81	48.246	Tupaia_belangeri
ENSGALG00000015267	CMSS1	100	61.686	ENSTTRG00000001562	CMSS1	96	61.049	Tursiops_truncatus
ENSGALG00000015267	CMSS1	100	64.368	ENSUAMG00000024209	CMSS1	100	69.058	Ursus_americanus
ENSGALG00000015267	CMSS1	100	63.985	ENSUMAG00000001983	CMSS1	100	63.740	Ursus_maritimus
ENSGALG00000015267	CMSS1	87	55.263	ENSVPAG00000000263	CMSS1	57	71.250	Vicugna_pacos
ENSGALG00000015267	CMSS1	90	68.644	ENSVVUG00000021647	-	96	68.644	Vulpes_vulpes
ENSGALG00000015267	CMSS1	77	69.802	ENSVVUG00000007776	-	80	69.802	Vulpes_vulpes
ENSGALG00000015267	CMSS1	100	58.333	ENSXETG00000011858	cmss1	96	57.621	Xenopus_tropicalis
ENSGALG00000015267	CMSS1	80	62.019	ENSXCOG00000018724	cmss1	69	61.881	Xiphophorus_couchianus
ENSGALG00000015267	CMSS1	80	62.019	ENSXMAG00000011243	cmss1	76	61.881	Xiphophorus_maculatus