EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000015887 (Gene tree)
Gene ID: 427975
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis 1 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 43773 bases
Position: chr1:106243613-106287385
Accession: 427975
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000025561	Npa1	PF11707.8	1e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000025608	URB1-201	6825	-	ENSGALP00000025561	2274 (aa)	XP_003640527	F1NXQ1

Gene Model

Click here to download ENSGALG00000015887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000015887's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000015887	URB1	99	56.506	ENSG00000142207	URB1	99	56.466	Homo_sapiens
ENSGALG00000015887	URB1	98	45.734	ENSAPOG00000020308	urb1	99	45.555	Acanthochromis_polyacanthus
ENSGALG00000015887	URB1	99	55.942	ENSAMEG00000011998	URB1	99	55.986	Ailuropoda_melanoleuca
ENSGALG00000015887	URB1	94	46.108	ENSACIG00000003248	urb1	96	46.058	Amphilophus_citrinellus
ENSGALG00000015887	URB1	98	43.970	ENSAOCG00000010364	urb1	98	43.970	Amphiprion_ocellaris
ENSGALG00000015887	URB1	98	45.635	ENSAPEG00000010758	urb1	98	45.547	Amphiprion_percula
ENSGALG00000015887	URB1	98	45.368	ENSATEG00000011790	urb1	99	45.217	Anabas_testudineus
ENSGALG00000015887	URB1	97	88.123	ENSAPLG00000012791	URB1	100	88.123	Anas_platyrhynchos
ENSGALG00000015887	URB1	100	63.359	ENSACAG00000002817	URB1	99	63.359	Anolis_carolinensis
ENSGALG00000015887	URB1	99	56.835	ENSANAG00000024617	URB1	99	56.811	Aotus_nancymaae
ENSGALG00000015887	URB1	99	46.984	ENSACLG00000024865	urb1	99	46.808	Astatotilapia_calliptera
ENSGALG00000015887	URB1	99	41.604	ENSAMXG00000012306	urb1	99	41.305	Astyanax_mexicanus
ENSGALG00000015887	URB1	99	54.923	ENSBTAG00000012412	URB1	99	55.055	Bos_taurus
ENSGALG00000015887	URB1	99	56.272	ENSCJAG00000009118	URB1	99	56.250	Callithrix_jacchus
ENSGALG00000015887	URB1	99	57.443	ENSCAFG00000008892	URB1	99	57.443	Canis_familiaris
ENSGALG00000015887	URB1	99	56.653	ENSCAFG00020025994	-	99	56.653	Canis_lupus_dingo
ENSGALG00000015887	URB1	99	57.243	ENSCAFG00020025987	-	99	57.243	Canis_lupus_dingo
ENSGALG00000015887	URB1	99	54.688	ENSCHIG00000015645	URB1	99	54.775	Capra_hircus
ENSGALG00000015887	URB1	99	56.763	ENSTSYG00000013286	URB1	99	56.763	Carlito_syrichta
ENSGALG00000015887	URB1	98	54.452	ENSCAPG00000015589	URB1	99	54.452	Cavia_aperea
ENSGALG00000015887	URB1	99	55.434	ENSCPOG00000006748	URB1	99	55.434	Cavia_porcellus
ENSGALG00000015887	URB1	99	56.948	ENSCCAG00000021299	URB1	99	56.924	Cebus_capucinus
ENSGALG00000015887	URB1	99	57.111	ENSCATG00000042630	URB1	99	56.999	Cercocebus_atys
ENSGALG00000015887	URB1	99	55.969	ENSCLAG00000005262	URB1	99	56.143	Chinchilla_lanigera
ENSGALG00000015887	URB1	99	55.940	ENSCSAG00000009584	URB1	99	55.836	Chlorocebus_sabaeus
ENSGALG00000015887	URB1	100	75.305	ENSCPBG00000006454	URB1	100	75.305	Chrysemys_picta_bellii
ENSGALG00000015887	URB1	99	56.954	ENSCANG00000031088	URB1	99	56.843	Colobus_angolensis_palliatus
ENSGALG00000015887	URB1	99	55.560	ENSCGRG00001010616	Urb1	99	55.526	Cricetulus_griseus_chok1gshd
ENSGALG00000015887	URB1	98	55.481	ENSCGRG00000015840	Urb1	99	55.481	Cricetulus_griseus_crigri
ENSGALG00000015887	URB1	98	44.731	ENSCSEG00000012616	urb1	99	44.736	Cynoglossus_semilaevis
ENSGALG00000015887	URB1	96	54.622	ENSCVAG00000009076	urb1	98	55.310	Cyprinodon_variegatus
ENSGALG00000015887	URB1	99	45.435	ENSDARG00000060308	urb1	99	45.235	Danio_rerio
ENSGALG00000015887	URB1	84	59.990	ENSDNOG00000015586	URB1	99	59.990	Dasypus_novemcinctus
ENSGALG00000015887	URB1	99	55.711	ENSDORG00000006735	Urb1	99	55.711	Dipodomys_ordii
ENSGALG00000015887	URB1	89	65.103	ENSETEG00000009080	URB1	90	65.103	Echinops_telfairi
ENSGALG00000015887	URB1	99	55.580	ENSEASG00005007711	URB1	99	55.624	Equus_asinus_asinus
ENSGALG00000015887	URB1	96	66.476	ENSECAG00000013206	URB1	99	66.476	Equus_caballus
ENSGALG00000015887	URB1	54	66.946	ENSEEUG00000003626	-	53	66.946	Erinaceus_europaeus
ENSGALG00000015887	URB1	95	65.000	ENSELUG00000020516	urb1	97	65.000	Esox_lucius
ENSGALG00000015887	URB1	99	56.055	ENSFCAG00000002177	URB1	99	56.055	Felis_catus
ENSGALG00000015887	URB1	98	69.125	ENSFALG00000004636	URB1	99	69.105	Ficedula_albicollis
ENSGALG00000015887	URB1	99	55.683	ENSFDAG00000007288	URB1	95	55.643	Fukomys_damarensis
ENSGALG00000015887	URB1	99	42.404	ENSFHEG00000000202	urb1	98	44.754	Fundulus_heteroclitus
ENSGALG00000015887	URB1	92	48.059	ENSGMOG00000001838	urb1	93	48.059	Gadus_morhua
ENSGALG00000015887	URB1	98	44.695	ENSGAFG00000020694	urb1	98	44.515	Gambusia_affinis
ENSGALG00000015887	URB1	99	46.749	ENSGACG00000011703	urb1	99	46.749	Gasterosteus_aculeatus
ENSGALG00000015887	URB1	100	74.586	ENSGAGG00000022544	URB1	100	74.586	Gopherus_agassizii
ENSGALG00000015887	URB1	99	56.533	ENSGGOG00000000285	URB1	99	56.510	Gorilla_gorilla
ENSGALG00000015887	URB1	99	46.764	ENSHBUG00000001904	urb1	99	46.631	Haplochromis_burtoni
ENSGALG00000015887	URB1	99	54.946	ENSHGLG00000004907	URB1	99	55.076	Heterocephalus_glaber_female
ENSGALG00000015887	URB1	99	55.255	ENSHGLG00100010749	URB1	99	55.386	Heterocephalus_glaber_male
ENSGALG00000015887	URB1	69	54.906	ENSHCOG00000018683	urb1	97	55.094	Hippocampus_comes
ENSGALG00000015887	URB1	99	41.384	ENSIPUG00000014721	urb1	99	41.253	Ictalurus_punctatus
ENSGALG00000015887	URB1	99	56.468	ENSSTOG00000004539	URB1	99	56.381	Ictidomys_tridecemlineatus
ENSGALG00000015887	URB1	94	48.420	ENSKMAG00000006001	urb1	98	48.420	Kryptolebias_marmoratus
ENSGALG00000015887	URB1	96	53.774	ENSLBEG00000027208	urb1	99	53.774	Labrus_bergylta
ENSGALG00000015887	URB1	99	53.415	ENSLACG00000017059	URB1	99	53.415	Latimeria_chalumnae
ENSGALG00000015887	URB1	99	47.662	ENSLOCG00000009190	urb1	99	47.662	Lepisosteus_oculatus
ENSGALG00000015887	URB1	99	57.374	ENSLAFG00000010407	URB1	99	57.374	Loxodonta_africana
ENSGALG00000015887	URB1	99	56.891	ENSMFAG00000034391	URB1	96	56.780	Macaca_fascicularis
ENSGALG00000015887	URB1	99	56.803	ENSMMUG00000010295	URB1	99	56.693	Macaca_mulatta
ENSGALG00000015887	URB1	99	55.790	ENSMNEG00000032981	URB1	99	55.687	Macaca_nemestrina
ENSGALG00000015887	URB1	99	56.935	ENSMLEG00000041435	URB1	99	56.868	Mandrillus_leucophaeus
ENSGALG00000015887	URB1	98	44.847	ENSMAMG00000011238	urb1	98	44.799	Mastacembelus_armatus
ENSGALG00000015887	URB1	99	44.128	ENSMZEG00005011862	urb1	99	44.040	Maylandia_zebra
ENSGALG00000015887	URB1	98	95.027	ENSMGAG00000014512	URB1	99	95.027	Meleagris_gallopavo
ENSGALG00000015887	URB1	92	61.721	ENSMAUG00000010516	Urb1	99	61.103	Mesocricetus_auratus
ENSGALG00000015887	URB1	99	56.002	ENSMICG00000016424	URB1	99	56.176	Microcebus_murinus
ENSGALG00000015887	URB1	99	53.970	ENSMOCG00000012613	Urb1	99	54.014	Microtus_ochrogaster
ENSGALG00000015887	URB1	99	58.435	ENSMODG00000021076	URB1	99	58.435	Monodelphis_domestica
ENSGALG00000015887	URB1	92	56.545	ENSMALG00000017411	urb1	95	56.545	Monopterus_albus
ENSGALG00000015887	URB1	99	54.950	MGP_CAROLIEiJ_G0020948	Urb1	99	54.950	Mus_caroli
ENSGALG00000015887	URB1	99	54.613	ENSMUSG00000039929	Urb1	99	54.613	Mus_musculus
ENSGALG00000015887	URB1	99	54.664	MGP_PahariEiJ_G0016653	Urb1	99	54.795	Mus_pahari
ENSGALG00000015887	URB1	99	54.819	MGP_SPRETEiJ_G0021854	Urb1	99	54.819	Mus_spretus
ENSGALG00000015887	URB1	99	56.105	ENSMPUG00000001123	URB1	99	56.105	Mustela_putorius_furo
ENSGALG00000015887	URB1	99	54.478	ENSNGAG00000001905	Urb1	99	54.478	Nannospalax_galili
ENSGALG00000015887	URB1	80	47.027	ENSNBRG00000001049	urb1	98	46.890	Neolamprologus_brichardi
ENSGALG00000015887	URB1	99	55.320	ENSNLEG00000026872	URB1	99	55.287	Nomascus_leucogenys
ENSGALG00000015887	URB1	92	61.969	ENSMEUG00000010828	URB1	94	61.248	Notamacropus_eugenii
ENSGALG00000015887	URB1	99	52.993	ENSOPRG00000013482	URB1	99	52.993	Ochotona_princeps
ENSGALG00000015887	URB1	99	55.546	ENSODEG00000002587	URB1	99	55.721	Octodon_degus
ENSGALG00000015887	URB1	99	47.558	ENSONIG00000005599	urb1	99	47.382	Oreochromis_niloticus
ENSGALG00000015887	URB1	99	56.223	ENSOCUG00000009381	URB1	99	56.223	Oryctolagus_cuniculus
ENSGALG00000015887	URB1	98	45.603	ENSORLG00000003429	urb1	99	45.426	Oryzias_latipes
ENSGALG00000015887	URB1	99	45.423	ENSORLG00020013785	urb1	99	45.346	Oryzias_latipes_hni
ENSGALG00000015887	URB1	96	55.676	ENSORLG00015019421	urb1	98	55.676	Oryzias_latipes_hsok
ENSGALG00000015887	URB1	77	51.752	ENSOMEG00000002094	urb1	97	51.752	Oryzias_melastigma
ENSGALG00000015887	URB1	99	56.668	ENSOGAG00000017140	URB1	99	56.756	Otolemur_garnettii
ENSGALG00000015887	URB1	96	58.398	ENSOARG00000013679	URB1	99	58.143	Ovis_aries
ENSGALG00000015887	URB1	99	56.583	ENSPPAG00000003423	URB1	99	56.560	Pan_paniscus
ENSGALG00000015887	URB1	99	56.401	ENSPPRG00000023131	URB1	99	56.401	Panthera_pardus
ENSGALG00000015887	URB1	92	56.398	ENSPTIG00000016125	URB1	97	56.496	Panthera_tigris_altaica
ENSGALG00000015887	URB1	99	56.495	ENSPTRG00000013852	URB1	99	56.472	Pan_troglodytes
ENSGALG00000015887	URB1	99	56.935	ENSPANG00000021964	URB1	99	56.824	Papio_anubis
ENSGALG00000015887	URB1	99	46.422	ENSPKIG00000003683	urb1	98	46.528	Paramormyrops_kingsleyae
ENSGALG00000015887	URB1	99	55.061	ENSPEMG00000021205	Urb1	99	55.061	Peromyscus_maniculatus_bairdii
ENSGALG00000015887	URB1	80	32.948	ENSPMAG00000009733	URB1	99	34.156	Petromyzon_marinus
ENSGALG00000015887	URB1	99	58.024	ENSPCIG00000016350	URB1	99	58.480	Phascolarctos_cinereus
ENSGALG00000015887	URB1	95	45.160	ENSPLAG00000004371	urb1	99	45.160	Poecilia_latipinna
ENSGALG00000015887	URB1	98	45.551	ENSPMEG00000006634	urb1	99	45.551	Poecilia_mexicana
ENSGALG00000015887	URB1	98	45.820	ENSPREG00000013453	urb1	99	45.820	Poecilia_reticulata
ENSGALG00000015887	URB1	99	56.360	ENSPPYG00000011359	URB1	99	56.343	Pongo_abelii
ENSGALG00000015887	URB1	99	49.671	ENSPCAG00000007430	URB1	99	49.671	Procavia_capensis
ENSGALG00000015887	URB1	99	56.264	ENSPCOG00000022695	URB1	99	56.476	Propithecus_coquereli
ENSGALG00000015887	URB1	99	54.577	ENSPVAG00000000889	URB1	99	54.577	Pteropus_vampyrus
ENSGALG00000015887	URB1	99	45.611	ENSPNYG00000010589	urb1	99	45.519	Pundamilia_nyererei
ENSGALG00000015887	URB1	99	42.678	ENSPNAG00000019324	urb1	99	42.795	Pygocentrus_nattereri
ENSGALG00000015887	URB1	99	54.645	ENSRNOG00000002080	Urb1	99	54.688	Rattus_norvegicus
ENSGALG00000015887	URB1	99	56.627	ENSRBIG00000033122	URB1	99	56.518	Rhinopithecus_bieti
ENSGALG00000015887	URB1	99	56.627	ENSRROG00000040237	URB1	99	56.518	Rhinopithecus_roxellana
ENSGALG00000015887	URB1	99	57.187	ENSSBOG00000027672	URB1	99	57.162	Saimiri_boliviensis_boliviensis
ENSGALG00000015887	URB1	99	58.355	ENSSHAG00000005140	URB1	99	58.355	Sarcophilus_harrisii
ENSGALG00000015887	URB1	90	48.504	ENSSFOG00015000339	urb1	98	48.241	Scleropages_formosus
ENSGALG00000015887	URB1	99	46.684	ENSSMAG00000003782	urb1	99	46.596	Scophthalmus_maximus
ENSGALG00000015887	URB1	98	48.078	ENSSDUG00000012313	urb1	99	47.857	Seriola_dumerili
ENSGALG00000015887	URB1	99	47.364	ENSSLDG00000023179	urb1	99	47.146	Seriola_lalandi_dorsalis
ENSGALG00000015887	URB1	99	67.409	ENSSPUG00000012447	URB1	99	67.409	Sphenodon_punctatus
ENSGALG00000015887	URB1	98	47.118	ENSSPAG00000006325	urb1	99	47.030	Stegastes_partitus
ENSGALG00000015887	URB1	99	55.760	ENSSSCG00000032024	URB1	99	55.760	Sus_scrofa
ENSGALG00000015887	URB1	74	79.929	ENSTGUG00000013442	URB1	100	79.929	Taeniopygia_guttata
ENSGALG00000015887	URB1	98	45.987	ENSTRUG00000009372	urb1	99	45.987	Takifugu_rubripes
ENSGALG00000015887	URB1	97	45.783	ENSTNIG00000016277	urb1	99	45.783	Tetraodon_nigroviridis
ENSGALG00000015887	URB1	78	63.450	ENSTBEG00000010044	URB1	79	63.450	Tupaia_belangeri
ENSGALG00000015887	URB1	91	60.247	ENSTTRG00000007712	URB1	92	60.247	Tursiops_truncatus
ENSGALG00000015887	URB1	99	55.854	ENSUAMG00000012231	URB1	99	55.898	Ursus_americanus
ENSGALG00000015887	URB1	91	57.016	ENSUMAG00000017419	URB1	98	56.694	Ursus_maritimus
ENSGALG00000015887	URB1	67	73.288	ENSVPAG00000001164	URB1	67	73.288	Vicugna_pacos
ENSGALG00000015887	URB1	99	57.432	ENSVVUG00000000551	URB1	99	57.432	Vulpes_vulpes
ENSGALG00000015887	URB1	99	55.536	ENSXETG00000009895	urb1	99	55.536	Xenopus_tropicalis
ENSGALG00000015887	URB1	96	55.191	ENSXCOG00000005500	urb1	98	55.191	Xiphophorus_couchianus
ENSGALG00000015887	URB1	96	55.738	ENSXMAG00000007253	urb1	98	55.738	Xiphophorus_maculatus