EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000016461 (Gene tree)
Gene ID: 395249
Gene Symbol: DDX1
Alias: -
Full Name: Gallus gallus DEAD-box helicase 1 (DDX1)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 21360 bases
Position: chr3:98936284-98957643
Accession: NM_204563
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000026509	DEAD	PF00270.29	3.1e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
					(aa)

Gene Model

Click here to download ENSGALG00000016461's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000016461's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000016461	DDX1	100	93.378	ENSG00000079785	DDX1	100	93.378	Homo_sapiens
ENSGALG00000016461	DDX1	100	85.541	ENSAPOG00000003166	ddx1	100	85.541	Acanthochromis_polyacanthus
ENSGALG00000016461	DDX1	99	93.099	ENSAMEG00000001071	DDX1	99	93.099	Ailuropoda_melanoleuca
ENSGALG00000016461	DDX1	89	83.359	ENSACIG00000017422	ddx1	99	82.748	Amphilophus_citrinellus
ENSGALG00000016461	DDX1	89	83.587	ENSAOCG00000015436	ddx1	94	85.063	Amphiprion_ocellaris
ENSGALG00000016461	DDX1	100	85.811	ENSAPEG00000007699	ddx1	100	85.811	Amphiprion_percula
ENSGALG00000016461	DDX1	94	85.530	ENSATEG00000003965	ddx1	98	84.580	Anabas_testudineus
ENSGALG00000016461	DDX1	100	98.253	ENSAPLG00000011093	DDX1	100	98.253	Anas_platyrhynchos
ENSGALG00000016461	DDX1	94	92.550	ENSACAG00000011036	DDX1	99	92.550	Anolis_carolinensis
ENSGALG00000016461	DDX1	100	93.378	ENSANAG00000037912	DDX1	100	93.378	Aotus_nancymaae
ENSGALG00000016461	DDX1	99	85.482	ENSACLG00000008850	ddx1	99	84.275	Astatotilapia_calliptera
ENSGALG00000016461	DDX1	100	84.730	ENSAMXG00000002100	ddx1	100	84.730	Astyanax_mexicanus
ENSGALG00000016461	DDX1	100	93.514	ENSBTAG00000009906	DDX1	100	93.514	Bos_taurus
ENSGALG00000016461	DDX1	98	47.703	WBGene00021938	Y55F3BR.1	98	47.703	Caenorhabditis_elegans
ENSGALG00000016461	DDX1	100	93.378	ENSCJAG00000007076	DDX1	100	93.378	Callithrix_jacchus
ENSGALG00000016461	DDX1	100	93.514	ENSCAFG00000003686	DDX1	100	93.514	Canis_familiaris
ENSGALG00000016461	DDX1	100	93.514	ENSCAFG00020026083	DDX1	100	93.514	Canis_lupus_dingo
ENSGALG00000016461	DDX1	100	93.919	ENSCHIG00000011046	DDX1	100	93.919	Capra_hircus
ENSGALG00000016461	DDX1	100	93.649	ENSTSYG00000002477	-	100	93.649	Carlito_syrichta
ENSGALG00000016461	DDX1	99	66.893	ENSTSYG00000037396	-	97	69.954	Carlito_syrichta
ENSGALG00000016461	DDX1	86	74.883	ENSCAPG00000008906	-	93	74.883	Cavia_aperea
ENSGALG00000016461	DDX1	88	90.812	ENSCPOG00000009816	-	96	90.812	Cavia_porcellus
ENSGALG00000016461	DDX1	68	91.833	ENSCPOG00000032467	-	100	91.833	Cavia_porcellus
ENSGALG00000016461	DDX1	100	93.378	ENSCCAG00000030085	DDX1	100	93.378	Cebus_capucinus
ENSGALG00000016461	DDX1	100	93.378	ENSCATG00000033924	DDX1	100	93.378	Cercocebus_atys
ENSGALG00000016461	DDX1	100	93.108	ENSCLAG00000005434	DDX1	100	93.108	Chinchilla_lanigera
ENSGALG00000016461	DDX1	100	93.378	ENSCSAG00000007883	DDX1	100	93.378	Chlorocebus_sabaeus
ENSGALG00000016461	DDX1	70	95.012	ENSCHOG00000002171	DDX1	70	95.012	Choloepus_hoffmanni
ENSGALG00000016461	DDX1	99	88.587	ENSCPBG00000013330	DDX1	99	94.042	Chrysemys_picta_bellii
ENSGALG00000016461	DDX1	100	65.997	ENSCING00000001176	-	100	65.867	Ciona_intestinalis
ENSGALG00000016461	DDX1	98	60.989	ENSCSAVG00000003028	-	99	60.989	Ciona_savignyi
ENSGALG00000016461	DDX1	100	93.378	ENSCANG00000031530	DDX1	100	93.378	Colobus_angolensis_palliatus
ENSGALG00000016461	DDX1	100	93.919	ENSCGRG00001013025	Ddx1	100	93.919	Cricetulus_griseus_chok1gshd
ENSGALG00000016461	DDX1	100	93.919	ENSCGRG00000000676	Ddx1	100	93.919	Cricetulus_griseus_crigri
ENSGALG00000016461	DDX1	99	85.150	ENSCSEG00000002630	ddx1	100	85.150	Cynoglossus_semilaevis
ENSGALG00000016461	DDX1	99	85.014	ENSCVAG00000020927	ddx1	100	85.014	Cyprinodon_variegatus
ENSGALG00000016461	DDX1	100	85.270	ENSDARG00000032117	ddx1	100	85.286	Danio_rerio
ENSGALG00000016461	DDX1	100	93.514	ENSDNOG00000006905	DDX1	100	93.514	Dasypus_novemcinctus
ENSGALG00000016461	DDX1	100	93.514	ENSDORG00000012847	Ddx1	100	93.514	Dipodomys_ordii
ENSGALG00000016461	DDX1	98	59.781	FBgn0015075	Ddx1	99	60.328	Drosophila_melanogaster
ENSGALG00000016461	DDX1	100	82.973	ENSETEG00000014259	DDX1	100	82.973	Echinops_telfairi
ENSGALG00000016461	DDX1	64	78.178	ENSEBUG00000009800	-	99	78.178	Eptatretus_burgeri
ENSGALG00000016461	DDX1	100	93.514	ENSEASG00005009335	DDX1	92	93.514	Equus_asinus_asinus
ENSGALG00000016461	DDX1	94	93.257	ENSECAG00000016396	DDX1	100	93.257	Equus_caballus
ENSGALG00000016461	DDX1	89	90.772	ENSEEUG00000001606	DDX1	89	90.772	Erinaceus_europaeus
ENSGALG00000016461	DDX1	100	81.646	ENSELUG00000006743	ddx1	100	81.646	Esox_lucius
ENSGALG00000016461	DDX1	100	93.919	ENSFCAG00000004680	DDX1	100	93.919	Felis_catus
ENSGALG00000016461	DDX1	100	97.703	ENSFALG00000008696	DDX1	100	97.703	Ficedula_albicollis
ENSGALG00000016461	DDX1	100	93.243	ENSFDAG00000021305	DDX1	100	93.243	Fukomys_damarensis
ENSGALG00000016461	DDX1	100	84.189	ENSFHEG00000008444	ddx1	100	84.189	Fundulus_heteroclitus
ENSGALG00000016461	DDX1	100	82.503	ENSGMOG00000011300	ddx1	100	82.503	Gadus_morhua
ENSGALG00000016461	DDX1	100	84.865	ENSGAFG00000004706	ddx1	100	84.865	Gambusia_affinis
ENSGALG00000016461	DDX1	100	82.703	ENSGACG00000011162	ddx1	100	82.703	Gasterosteus_aculeatus
ENSGALG00000016461	DDX1	100	95.000	ENSGAGG00000021020	DDX1	100	95.000	Gopherus_agassizii
ENSGALG00000016461	DDX1	100	93.378	ENSGGOG00000012482	DDX1	100	93.378	Gorilla_gorilla
ENSGALG00000016461	DDX1	100	85.541	ENSHBUG00000014069	ddx1	100	85.541	Haplochromis_burtoni
ENSGALG00000016461	DDX1	100	93.243	ENSHGLG00000000801	DDX1	100	93.243	Heterocephalus_glaber_female
ENSGALG00000016461	DDX1	99	93.188	ENSHGLG00100000711	DDX1	100	93.188	Heterocephalus_glaber_male
ENSGALG00000016461	DDX1	100	84.865	ENSHCOG00000011492	ddx1	96	84.865	Hippocampus_comes
ENSGALG00000016461	DDX1	100	83.784	ENSIPUG00000003494	ddx1	100	83.784	Ictalurus_punctatus
ENSGALG00000016461	DDX1	99	93.460	ENSSTOG00000003977	DDX1	100	93.460	Ictidomys_tridecemlineatus
ENSGALG00000016461	DDX1	89	89.618	ENSJJAG00000013315	Ddx1	100	89.618	Jaculus_jaculus
ENSGALG00000016461	DDX1	100	86.081	ENSKMAG00000011340	ddx1	100	86.081	Kryptolebias_marmoratus
ENSGALG00000016461	DDX1	88	79.695	ENSLBEG00000008692	ddx1	99	79.695	Labrus_bergylta
ENSGALG00000016461	DDX1	100	88.514	ENSLACG00000010529	DDX1	100	88.514	Latimeria_chalumnae
ENSGALG00000016461	DDX1	100	87.802	ENSLOCG00000016473	ddx1	100	87.802	Lepisosteus_oculatus
ENSGALG00000016461	DDX1	99	93.487	ENSLAFG00000002213	DDX1	99	93.487	Loxodonta_africana
ENSGALG00000016461	DDX1	100	93.378	ENSMFAG00000033987	DDX1	100	93.378	Macaca_fascicularis
ENSGALG00000016461	DDX1	100	93.378	ENSMMUG00000023437	DDX1	100	93.378	Macaca_mulatta
ENSGALG00000016461	DDX1	100	93.378	ENSMNEG00000029189	DDX1	100	93.378	Macaca_nemestrina
ENSGALG00000016461	DDX1	100	93.243	ENSMLEG00000030787	DDX1	100	93.243	Mandrillus_leucophaeus
ENSGALG00000016461	DDX1	100	85.946	ENSMAMG00000015916	ddx1	100	85.946	Mastacembelus_armatus
ENSGALG00000016461	DDX1	99	85.482	ENSMZEG00005015207	ddx1	99	84.275	Maylandia_zebra
ENSGALG00000016461	DDX1	99	95.528	ENSMGAG00000014025	DDX1	100	95.528	Meleagris_gallopavo
ENSGALG00000016461	DDX1	64	98.182	ENSMAUG00000016156	Ddx1	100	98.182	Mesocricetus_auratus
ENSGALG00000016461	DDX1	100	93.378	ENSMICG00000001023	DDX1	100	93.378	Microcebus_murinus
ENSGALG00000016461	DDX1	100	93.649	ENSMOCG00000000257	Ddx1	100	93.649	Microtus_ochrogaster
ENSGALG00000016461	DDX1	89	82.290	ENSMMOG00000015397	ddx1	99	82.290	Mola_mola
ENSGALG00000016461	DDX1	99	93.216	ENSMODG00000010275	DDX1	99	93.216	Monodelphis_domestica
ENSGALG00000016461	DDX1	100	85.541	ENSMALG00000016409	ddx1	100	85.541	Monopterus_albus
ENSGALG00000016461	DDX1	100	93.784	MGP_CAROLIEiJ_G0017622	Ddx1	100	93.784	Mus_caroli
ENSGALG00000016461	DDX1	100	93.243	ENSMUSG00000037149	Ddx1	100	93.243	Mus_musculus
ENSGALG00000016461	DDX1	100	93.514	MGP_PahariEiJ_G0029378	Ddx1	100	93.514	Mus_pahari
ENSGALG00000016461	DDX1	100	93.243	MGP_SPRETEiJ_G0018464	Ddx1	100	93.243	Mus_spretus
ENSGALG00000016461	DDX1	100	93.649	ENSMPUG00000013606	DDX1	100	93.649	Mustela_putorius_furo
ENSGALG00000016461	DDX1	99	92.935	ENSMLUG00000003027	DDX1	98	92.935	Myotis_lucifugus
ENSGALG00000016461	DDX1	99	93.733	ENSNGAG00000015783	Ddx1	100	93.733	Nannospalax_galili
ENSGALG00000016461	DDX1	78	81.002	ENSNBRG00000020677	ddx1	94	81.002	Neolamprologus_brichardi
ENSGALG00000016461	DDX1	100	93.514	ENSNLEG00000014417	DDX1	100	93.514	Nomascus_leucogenys
ENSGALG00000016461	DDX1	99	91.382	ENSMEUG00000008254	DDX1	99	91.382	Notamacropus_eugenii
ENSGALG00000016461	DDX1	100	66.757	ENSOPRG00000004290	DDX1	100	66.757	Ochotona_princeps
ENSGALG00000016461	DDX1	100	93.243	ENSODEG00000000569	DDX1	100	93.243	Octodon_degus
ENSGALG00000016461	DDX1	100	85.695	ENSONIG00000000513	ddx1	100	85.695	Oreochromis_niloticus
ENSGALG00000016461	DDX1	75	90.860	ENSOANG00000005450	DDX1	99	90.860	Ornithorhynchus_anatinus
ENSGALG00000016461	DDX1	100	93.784	ENSOCUG00000007010	DDX1	100	93.784	Oryctolagus_cuniculus
ENSGALG00000016461	DDX1	100	85.405	ENSORLG00000016709	ddx1	100	85.405	Oryzias_latipes
ENSGALG00000016461	DDX1	99	85.150	ENSORLG00020003290	ddx1	100	85.150	Oryzias_latipes_hni
ENSGALG00000016461	DDX1	100	85.000	ENSORLG00015022438	ddx1	100	85.000	Oryzias_latipes_hsok
ENSGALG00000016461	DDX1	100	81.216	ENSOMEG00000017620	ddx1	100	79.730	Oryzias_melastigma
ENSGALG00000016461	DDX1	99	93.207	ENSOGAG00000008730	DDX1	100	93.207	Otolemur_garnettii
ENSGALG00000016461	DDX1	99	93.614	ENSOARG00000016369	DDX1	100	93.614	Ovis_aries
ENSGALG00000016461	DDX1	100	93.243	ENSPPAG00000027432	DDX1	100	93.243	Pan_paniscus
ENSGALG00000016461	DDX1	100	93.919	ENSPPRG00000020556	DDX1	100	93.919	Panthera_pardus
ENSGALG00000016461	DDX1	100	93.919	ENSPTIG00000008267	DDX1	100	93.919	Panthera_tigris_altaica
ENSGALG00000016461	DDX1	100	93.243	ENSPTRG00000011670	DDX1	100	93.243	Pan_troglodytes
ENSGALG00000016461	DDX1	100	93.243	ENSPANG00000025185	DDX1	100	93.243	Papio_anubis
ENSGALG00000016461	DDX1	100	84.730	ENSPKIG00000012466	ddx1	100	84.877	Paramormyrops_kingsleyae
ENSGALG00000016461	DDX1	54	93.797	ENSPSIG00000012292	DDX1	100	93.797	Pelodiscus_sinensis
ENSGALG00000016461	DDX1	100	82.973	ENSPMGG00000000782	ddx1	100	81.486	Periophthalmus_magnuspinnatus
ENSGALG00000016461	DDX1	100	93.378	ENSPEMG00000016389	Ddx1	100	93.378	Peromyscus_maniculatus_bairdii
ENSGALG00000016461	DDX1	99	79.212	ENSPMAG00000009118	-	100	79.212	Petromyzon_marinus
ENSGALG00000016461	DDX1	100	93.919	ENSPCIG00000010941	DDX1	100	93.919	Phascolarctos_cinereus
ENSGALG00000016461	DDX1	86	83.359	ENSPFOG00000006873	-	100	83.359	Poecilia_formosa
ENSGALG00000016461	DDX1	100	85.000	ENSPFOG00000011921	ddx1	100	85.000	Poecilia_formosa
ENSGALG00000016461	DDX1	100	84.865	ENSPLAG00000005939	ddx1	100	84.865	Poecilia_latipinna
ENSGALG00000016461	DDX1	100	85.270	ENSPMEG00000011140	ddx1	100	85.270	Poecilia_mexicana
ENSGALG00000016461	DDX1	100	84.730	ENSPREG00000011751	ddx1	100	84.730	Poecilia_reticulata
ENSGALG00000016461	DDX1	100	93.378	ENSPPYG00000012638	DDX1	100	93.378	Pongo_abelii
ENSGALG00000016461	DDX1	100	79.730	ENSPCAG00000001491	DDX1	100	79.730	Procavia_capensis
ENSGALG00000016461	DDX1	99	91.281	ENSPCOG00000028185	DDX1	99	91.281	Propithecus_coquereli
ENSGALG00000016461	DDX1	100	93.649	ENSPVAG00000013618	DDX1	100	93.649	Pteropus_vampyrus
ENSGALG00000016461	DDX1	100	85.405	ENSPNYG00000013839	ddx1	100	85.405	Pundamilia_nyererei
ENSGALG00000016461	DDX1	89	83.817	ENSPNAG00000017033	ddx1	97	83.817	Pygocentrus_nattereri
ENSGALG00000016461	DDX1	100	93.649	ENSRNOG00000006652	Ddx1	100	93.649	Rattus_norvegicus
ENSGALG00000016461	DDX1	100	92.568	ENSRBIG00000041664	DDX1	100	92.568	Rhinopithecus_bieti
ENSGALG00000016461	DDX1	100	93.243	ENSRROG00000031167	DDX1	100	93.243	Rhinopithecus_roxellana
ENSGALG00000016461	DDX1	100	93.514	ENSSBOG00000027577	DDX1	100	93.514	Saimiri_boliviensis_boliviensis
ENSGALG00000016461	DDX1	99	85.889	ENSSHAG00000009363	DDX1	99	85.889	Sarcophilus_harrisii
ENSGALG00000016461	DDX1	100	84.189	ENSSFOG00015014476	ddx1	100	84.189	Scleropages_formosus
ENSGALG00000016461	DDX1	100	83.514	ENSSMAG00000010094	ddx1	100	83.514	Scophthalmus_maximus
ENSGALG00000016461	DDX1	100	85.000	ENSSDUG00000012334	ddx1	100	85.000	Seriola_dumerili
ENSGALG00000016461	DDX1	100	84.459	ENSSLDG00000025345	ddx1	100	84.459	Seriola_lalandi_dorsalis
ENSGALG00000016461	DDX1	91	93.069	ENSSARG00000004536	DDX1	92	93.069	Sorex_araneus
ENSGALG00000016461	DDX1	100	92.973	ENSSPUG00000018835	DDX1	100	92.973	Sphenodon_punctatus
ENSGALG00000016461	DDX1	100	80.000	ENSSPAG00000023554	ddx1	100	80.000	Stegastes_partitus
ENSGALG00000016461	DDX1	100	93.514	ENSSSCG00000008619	DDX1	100	93.514	Sus_scrofa
ENSGALG00000016461	DDX1	100	97.703	ENSTGUG00000013096	DDX1	100	97.703	Taeniopygia_guttata
ENSGALG00000016461	DDX1	99	84.417	ENSTRUG00000015765	ddx1	99	84.417	Takifugu_rubripes
ENSGALG00000016461	DDX1	100	85.135	ENSTNIG00000016309	ddx1	100	85.135	Tetraodon_nigroviridis
ENSGALG00000016461	DDX1	99	89.101	ENSTBEG00000008454	DDX1	100	89.101	Tupaia_belangeri
ENSGALG00000016461	DDX1	100	92.568	ENSTTRG00000005081	DDX1	100	92.568	Tursiops_truncatus
ENSGALG00000016461	DDX1	69	83.497	ENSUAMG00000017375	DDX1	92	83.497	Ursus_americanus
ENSGALG00000016461	DDX1	99	93.460	ENSUMAG00000023450	DDX1	100	93.460	Ursus_maritimus
ENSGALG00000016461	DDX1	85	94.712	ENSVPAG00000007764	DDX1	85	94.712	Vicugna_pacos
ENSGALG00000016461	DDX1	99	93.469	ENSVVUG00000013085	DDX1	96	93.469	Vulpes_vulpes
ENSGALG00000016461	DDX1	100	89.730	ENSXETG00000017825	ddx1	100	89.730	Xenopus_tropicalis
ENSGALG00000016461	DDX1	100	82.195	ENSXCOG00000007082	ddx1	100	82.195	Xiphophorus_couchianus
ENSGALG00000016461	DDX1	100	85.000	ENSXMAG00000004555	ddx1	100	85.000	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	IEA	Function
GO:0003682	chromatin binding	-	ISS	Function
GO:0003712	transcription coregulator activity	-	ISS	Function
GO:0004518	nuclease activity	-	ISS	Function
GO:0004527	exonuclease activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	ISS	Component
GO:0005737	cytoplasm	-	ISS	Component
GO:0005739	mitochondrion	-	ISS	Component
GO:0005829	cytosol	-	ISS	Component
GO:0006302	double-strand break repair	-	ISS	Process
GO:0006388	tRNA splicing, via endonucleolytic cleavage and ligation	-	ISS	Process
GO:0006397	mRNA processing	-	IEA	Process
GO:0008026	ATP-dependent helicase activity	-	ISS	Function
GO:0008143	poly(A) binding	-	ISS	Function
GO:0032508	DNA duplex unwinding	-	ISS	Process
GO:0033677	DNA/RNA helicase activity	-	ISS	Function
GO:0072669	tRNA-splicing ligase complex	-	ISS	Component
GO:0090305	nucleic acid phosphodiester bond hydrolysis	-	IEA	Process
GO:1903506	regulation of nucleic acid-templated transcription	-	IEA	Process