EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000016815 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 13807 bases
Position: chr1:138268907-138282713
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000027096	Smg4_UPF3	PF03467.15	7.5e-47	1	1
ENSGALP00000073904	Smg4_UPF3	PF03467.15	5.6e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000093309	-	462	-	ENSGALP00000073904	153 (aa)	-	-
ENSGALT00000027147	-	1145	-	ENSGALP00000027096	213 (aa)	-	E1BV08

Gene Model

Click here to download ENSGALG00000016815's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000016815's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000016815	-	70	75.333	ENSG00000125351	UPF3B	69	75.333	Homo_sapiens
ENSGALG00000016815	-	98	71.028	ENSG00000169062	UPF3A	72	57.500	Homo_sapiens
ENSGALG00000016815	-	91	70.984	ENSACIG00000020468	upf3a	75	83.929	Amphilophus_citrinellus
ENSGALG00000016815	-	70	75.333	ENSANAG00000021894	-	70	75.333	Aotus_nancymaae
ENSGALG00000016815	-	65	68.687	ENSANAG00000033169	-	54	68.382	Aotus_nancymaae
ENSGALG00000016815	-	70	70.093	ENSAMXG00000000199	upf3b	52	66.883	Astyanax_mexicanus
ENSGALG00000016815	-	98	73.239	ENSBTAG00000047365	-	82	77.838	Bos_taurus
ENSGALG00000016815	-	70	74.667	ENSCJAG00000004975	UPF3B	70	74.667	Callithrix_jacchus
ENSGALG00000016815	-	70	74.667	ENSTSYG00000014690	UPF3B	70	68.153	Carlito_syrichta
ENSGALG00000016815	-	70	75.333	ENSCATG00000017506	UPF3B	70	75.333	Cercocebus_atys
ENSGALG00000016815	-	66	64.138	ENSCLAG00000000093	-	78	65.254	Chinchilla_lanigera
ENSGALG00000016815	-	76	86.992	ENSCPBG00000022854	-	94	86.992	Chrysemys_picta_bellii
ENSGALG00000016815	-	75	53.509	ENSCING00000008396	-	97	53.846	Ciona_intestinalis
ENSGALG00000016815	-	68	84.615	ENSFHEG00000010418	upf3a	82	67.333	Fundulus_heteroclitus
ENSGALG00000016815	-	76	67.521	ENSGACG00000017435	upf3b	55	68.667	Gasterosteus_aculeatus
ENSGALG00000016815	-	69	98.095	ENSGAGG00000001952	UPF3A	82	98.621	Gopherus_agassizii
ENSGALG00000016815	-	70	75.333	ENSGGOG00000023995	UPF3B	58	75.221	Gorilla_gorilla
ENSGALG00000016815	-	68	85.577	ENSHCOG00000013985	upf3a	65	79.870	Hippocampus_comes
ENSGALG00000016815	-	99	71.429	ENSSTOG00000030282	-	89	71.429	Ictidomys_tridecemlineatus
ENSGALG00000016815	-	99	69.907	ENSJJAG00000018099	-	87	73.158	Jaculus_jaculus
ENSGALG00000016815	-	70	75.333	ENSMFAG00000045414	UPF3B	70	75.333	Macaca_fascicularis
ENSGALG00000016815	-	70	61.635	ENSMFAG00000045275	-	76	61.635	Macaca_fascicularis
ENSGALG00000016815	-	69	60.645	ENSMMUG00000046682	-	76	60.645	Macaca_mulatta
ENSGALG00000016815	-	70	75.333	ENSMMUG00000020222	UPF3B	70	75.333	Macaca_mulatta
ENSGALG00000016815	-	70	75.333	ENSMNEG00000039794	UPF3B	70	75.333	Macaca_nemestrina
ENSGALG00000016815	-	70	61.006	ENSMNEG00000040898	-	76	61.006	Macaca_nemestrina
ENSGALG00000016815	-	70	75.333	ENSMLEG00000010999	UPF3B	70	75.333	Mandrillus_leucophaeus
ENSGALG00000016815	-	68	60.811	ENSMICG00000042420	-	78	62.400	Microcebus_murinus
ENSGALG00000016815	-	99	69.767	ENSMOCG00000000550	Upf3a	51	72.581	Microtus_ochrogaster
ENSGALG00000016815	-	69	85.849	ENSMALG00000002454	-	62	82.143	Monopterus_albus
ENSGALG00000016815	-	71	69.725	ENSNBRG00000011560	upf3b	75	72.727	Neolamprologus_brichardi
ENSGALG00000016815	-	70	75.333	ENSNLEG00000014897	UPF3B	60	75.221	Nomascus_leucogenys
ENSGALG00000016815	-	70	64.000	ENSNLEG00000027516	-	71	64.000	Nomascus_leucogenys
ENSGALG00000016815	-	55	63.025	ENSODEG00000000596	-	59	63.025	Octodon_degus
ENSGALG00000016815	-	67	66.667	ENSODEG00000007164	-	65	64.626	Octodon_degus
ENSGALG00000016815	-	72	57.792	ENSODEG00000006064	-	76	58.940	Octodon_degus
ENSGALG00000016815	-	99	68.056	ENSODEG00000009176	-	72	72.973	Octodon_degus
ENSGALG00000016815	-	76	65.812	ENSORLG00020003758	upf3b	52	66.225	Oryzias_latipes_hni
ENSGALG00000016815	-	70	75.333	ENSPPAG00000040390	UPF3B	58	75.221	Pan_paniscus
ENSGALG00000016815	-	70	75.333	ENSPTRG00000022228	UPF3B	58	75.221	Pan_troglodytes
ENSGALG00000016815	-	70	75.333	ENSPANG00000000900	UPF3B	70	75.333	Papio_anubis
ENSGALG00000016815	-	70	61.250	ENSPANG00000029350	-	76	61.250	Papio_anubis
ENSGALG00000016815	-	75	70.175	ENSPKIG00000019226	upf3b	73	73.451	Paramormyrops_kingsleyae
ENSGALG00000016815	-	69	68.243	ENSPMGG00000016067	upf3b	54	68.243	Periophthalmus_magnuspinnatus
ENSGALG00000016815	-	93	79.397	ENSPCIG00000019590	-	90	78.095	Phascolarctos_cinereus
ENSGALG00000016815	-	91	68.557	ENSPLAG00000011960	upf3a	65	80.531	Poecilia_latipinna
ENSGALG00000016815	-	72	69.369	ENSPREG00000012214	upf3b	76	69.912	Poecilia_reticulata
ENSGALG00000016815	-	71	82.407	ENSPREG00000005566	upf3a	69	79.661	Poecilia_reticulata
ENSGALG00000016815	-	75	70.175	ENSPNAG00000021528	upf3b	50	69.333	Pygocentrus_nattereri
ENSGALG00000016815	-	70	75.333	ENSRROG00000041031	UPF3B	70	75.333	Rhinopithecus_roxellana
ENSGALG00000016815	-	70	75.333	ENSSBOG00000019740	UPF3B	71	75.333	Saimiri_boliviensis_boliviensis
ENSGALG00000016815	-	74	82.301	ENSSMAG00000003858	upf3a	76	82.301	Scophthalmus_maximus
ENSGALG00000016815	-	91	70.984	ENSSDUG00000009680	upf3a	91	64.497	Seriola_dumerili
ENSGALG00000016815	-	91	70.103	ENSSPAG00000007938	upf3a	69	80.795	Stegastes_partitus
ENSGALG00000016815	-	72	75.163	ENSVVUG00000011594	UPF3B	70	76.000	Vulpes_vulpes
ENSGALG00000016815	-	70	73.832	ENSXETG00000007440	upf3b	65	72.667	Xenopus_tropicalis
ENSGALG00000016815	-	75	65.789	ENSXCOG00000016586	upf3b	76	69.027	Xiphophorus_couchianus