EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000017357 (Gene tree)
Gene ID: 396195
Gene Symbol: SRSF2
Alias: SC-35|SFRS2
Full Name: Gallus gallus serine/arginine-rich splicing factor 2 (SRSF2)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 4431 bases
Position: chr18:4241336-4245766
Accession: NM_001001305
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000027988	RRM_1	PF00076.22	5e-22	1	1
ENSGALP00000056912	RRM_1	PF00076.22	5e-22	1	1
ENSGALP00000071757	RRM_1	PF00076.22	5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000028041	-	2357	-	ENSGALP00000027988	221 (aa)	XP_015150607	A0A1I7Q430
ENSGALT00000073781	-	3037	XM_025141547	ENSGALP00000056912	221 (aa)	XP_015150607	P30352
ENSGALT00000107499	-	1842	-	ENSGALP00000071757	221 (aa)	XP_015150607	UPI00001358BD

Gene Model

Click here to download ENSGALG00000017357's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03040	Spliceosome	KEGG
gga05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000017357's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000017357	SRSF2	100	98.190	ENSG00000161547	SRSF2	100	98.190	Homo_sapiens
ENSGALG00000017357	SRSF2	52	93.103	ENSAOCG00000021878	srsf2a	52	93.103	Amphiprion_ocellaris
ENSGALG00000017357	SRSF2	52	93.103	ENSAPEG00000023494	srsf2a	52	93.103	Amphiprion_percula
ENSGALG00000017357	SRSF2	100	98.190	ENSACAG00000008553	-	100	98.190	Anolis_carolinensis
ENSGALG00000017357	SRSF2	100	98.190	ENSANAG00000004226	SRSF2	100	98.190	Aotus_nancymaae
ENSGALG00000017357	SRSF2	100	98.190	ENSBTAG00000018258	SRSF2	100	98.190	Bos_taurus
ENSGALG00000017357	SRSF2	100	98.190	ENSCJAG00000041154	SRSF2	100	98.190	Callithrix_jacchus
ENSGALG00000017357	SRSF2	100	97.738	ENSCAFG00000005147	SRSF2	100	97.738	Canis_familiaris
ENSGALG00000017357	SRSF2	100	98.190	ENSCAFG00020006267	-	100	98.190	Canis_lupus_dingo
ENSGALG00000017357	SRSF2	100	98.190	ENSCHIG00000017001	-	100	98.190	Capra_hircus
ENSGALG00000017357	SRSF2	100	97.738	ENSCCAG00000037532	SRSF2	100	97.738	Cebus_capucinus
ENSGALG00000017357	SRSF2	100	98.190	ENSCATG00000033650	SRSF2	100	98.190	Cercocebus_atys
ENSGALG00000017357	SRSF2	100	98.190	ENSCSAG00000005108	SRSF2	100	98.190	Chlorocebus_sabaeus
ENSGALG00000017357	SRSF2	100	66.964	ENSCHOG00000014019	-	53	95.370	Choloepus_hoffmanni
ENSGALG00000017357	SRSF2	100	98.190	ENSCPBG00000027975	-	100	98.190	Chrysemys_picta_bellii
ENSGALG00000017357	SRSF2	100	98.190	ENSCANG00000028176	SRSF2	100	98.190	Colobus_angolensis_palliatus
ENSGALG00000017357	SRSF2	60	76.515	ENSCANG00000028971	-	60	72.258	Colobus_angolensis_palliatus
ENSGALG00000017357	SRSF2	100	98.190	ENSCGRG00001023483	Srsf2	100	98.190	Cricetulus_griseus_chok1gshd
ENSGALG00000017357	SRSF2	51	92.857	ENSCSEG00000013387	srsf2a	51	93.694	Cynoglossus_semilaevis
ENSGALG00000017357	SRSF2	54	94.167	ENSDARG00000057484	srsf2a	97	93.966	Danio_rerio
ENSGALG00000017357	SRSF2	96	50.704	ENSDNOG00000033905	-	53	64.000	Dasypus_novemcinctus
ENSGALG00000017357	SRSF2	100	98.190	ENSDNOG00000000439	-	100	98.190	Dasypus_novemcinctus
ENSGALG00000017357	SRSF2	74	59.146	ENSEBUG00000008729	-	56	73.043	Eptatretus_burgeri
ENSGALG00000017357	SRSF2	100	98.190	ENSEASG00005004319	-	100	98.190	Equus_asinus_asinus
ENSGALG00000017357	SRSF2	100	98.190	ENSECAG00000033515	-	100	98.190	Equus_caballus
ENSGALG00000017357	SRSF2	100	98.190	ENSFCAG00000043466	-	100	98.190	Felis_catus
ENSGALG00000017357	SRSF2	99	95.413	ENSFALG00000000869	-	99	95.413	Ficedula_albicollis
ENSGALG00000017357	SRSF2	100	98.190	ENSGAGG00000024457	-	100	98.190	Gopherus_agassizii
ENSGALG00000017357	SRSF2	100	91.855	ENSGGOG00000014378	SRSF2	100	91.855	Gorilla_gorilla
ENSGALG00000017357	SRSF2	100	98.190	ENSHGLG00000017262	-	100	98.190	Heterocephalus_glaber_female
ENSGALG00000017357	SRSF2	100	98.190	ENSJJAG00000013794	Srsf2	100	98.190	Jaculus_jaculus
ENSGALG00000017357	SRSF2	51	94.643	ENSLBEG00000027265	srsf2a	51	95.495	Labrus_bergylta
ENSGALG00000017357	SRSF2	100	85.973	ENSLOCG00000011252	srsf2a	53	93.966	Lepisosteus_oculatus
ENSGALG00000017357	SRSF2	51	72.566	ENSLAFG00000007469	-	51	72.566	Loxodonta_africana
ENSGALG00000017357	SRSF2	100	98.190	ENSMFAG00000045524	SRSF2	100	98.190	Macaca_fascicularis
ENSGALG00000017357	SRSF2	100	93.665	ENSMMUG00000022413	SRSF2	100	93.665	Macaca_mulatta
ENSGALG00000017357	SRSF2	100	98.190	ENSMNEG00000031444	SRSF2	100	98.190	Macaca_nemestrina
ENSGALG00000017357	SRSF2	100	98.190	ENSMAUG00000022242	Srsf2	100	98.190	Mesocricetus_auratus
ENSGALG00000017357	SRSF2	100	98.190	ENSMICG00000016956	-	100	98.190	Microcebus_murinus
ENSGALG00000017357	SRSF2	52	92.241	ENSMMOG00000020751	srsf2a	53	92.241	Mola_mola
ENSGALG00000017357	SRSF2	99	96.804	ENSMODG00000001575	-	86	96.804	Monodelphis_domestica
ENSGALG00000017357	SRSF2	52	93.103	ENSMALG00000012956	srsf2a	50	93.103	Monopterus_albus
ENSGALG00000017357	SRSF2	100	98.190	MGP_CAROLIEiJ_G0017457	Srsf2	100	98.190	Mus_caroli
ENSGALG00000017357	SRSF2	100	98.190	ENSMUSG00000034120	Srsf2	100	98.190	Mus_musculus
ENSGALG00000017357	SRSF2	100	98.190	MGP_PahariEiJ_G0018587	Srsf2	100	98.190	Mus_pahari
ENSGALG00000017357	SRSF2	100	98.190	MGP_SPRETEiJ_G0018303	Srsf2	100	98.190	Mus_spretus
ENSGALG00000017357	SRSF2	99	47.706	ENSMLUG00000026613	-	52	58.879	Myotis_lucifugus
ENSGALG00000017357	SRSF2	100	98.190	ENSNGAG00000021718	Srsf2	100	98.190	Nannospalax_galili
ENSGALG00000017357	SRSF2	100	98.190	ENSMEUG00000016745	-	100	98.190	Notamacropus_eugenii
ENSGALG00000017357	SRSF2	100	98.190	ENSODEG00000014748	-	100	98.190	Octodon_degus
ENSGALG00000017357	SRSF2	54	98.333	ENSOANG00000002695	-	100	98.333	Ornithorhynchus_anatinus
ENSGALG00000017357	SRSF2	99	65.455	ENSOCUG00000021840	-	52	72.414	Oryctolagus_cuniculus
ENSGALG00000017357	SRSF2	100	98.190	ENSOGAG00000028335	-	100	98.190	Otolemur_garnettii
ENSGALG00000017357	SRSF2	99	49.545	ENSOARG00000018667	-	51	72.549	Ovis_aries
ENSGALG00000017357	SRSF2	99	49.545	ENSOARG00000018359	-	51	72.549	Ovis_aries
ENSGALG00000017357	SRSF2	100	98.190	ENSPPAG00000031433	SRSF2	100	98.190	Pan_paniscus
ENSGALG00000017357	SRSF2	100	98.190	ENSPTRG00000009692	SRSF2	100	98.190	Pan_troglodytes
ENSGALG00000017357	SRSF2	100	98.190	ENSPANG00000020023	SRSF2	100	98.190	Papio_anubis
ENSGALG00000017357	SRSF2	52	92.105	ENSPKIG00000023128	-	50	92.105	Paramormyrops_kingsleyae
ENSGALG00000017357	SRSF2	100	98.190	ENSPCIG00000005334	-	100	98.190	Phascolarctos_cinereus
ENSGALG00000017357	SRSF2	100	98.190	ENSPPYG00000008668	SRSF2	100	98.190	Pongo_abelii
ENSGALG00000017357	SRSF2	100	98.190	ENSPCOG00000023806	-	100	98.190	Propithecus_coquereli
ENSGALG00000017357	SRSF2	54	98.333	ENSPVAG00000014264	-	100	98.333	Pteropus_vampyrus
ENSGALG00000017357	SRSF2	100	98.190	ENSRNOG00000000248	Srsf2	100	98.190	Rattus_norvegicus
ENSGALG00000017357	SRSF2	100	98.190	ENSRBIG00000034493	SRSF2	100	98.190	Rhinopithecus_bieti
ENSGALG00000017357	SRSF2	100	98.190	ENSRROG00000042457	SRSF2	100	98.190	Rhinopithecus_roxellana
ENSGALG00000017357	SRSF2	100	87.783	ENSSBOG00000030904	SRSF2	100	87.783	Saimiri_boliviensis_boliviensis
ENSGALG00000017357	SRSF2	100	97.748	ENSSHAG00000005932	-	100	97.748	Sarcophilus_harrisii
ENSGALG00000017357	SRSF2	51	93.750	ENSSFOG00015003975	-	50	94.595	Scleropages_formosus
ENSGALG00000017357	SRSF2	51	92.857	ENSSMAG00000005854	srsf2a	52	93.694	Scophthalmus_maximus
ENSGALG00000017357	SRSF2	51	93.750	ENSSDUG00000013865	srsf2a	50	94.595	Seriola_dumerili
ENSGALG00000017357	SRSF2	51	93.750	ENSSLDG00000017717	srsf2a	50	94.595	Seriola_lalandi_dorsalis
ENSGALG00000017357	SRSF2	100	92.760	ENSSPUG00000007582	-	50	100.000	Sphenodon_punctatus
ENSGALG00000017357	SRSF2	100	98.190	ENSSSCG00000036592	-	100	98.190	Sus_scrofa
ENSGALG00000017357	SRSF2	64	67.832	ENSSSCG00000012212	-	56	73.874	Sus_scrofa
ENSGALG00000017357	SRSF2	100	99.095	ENSTGUG00000007799	-	100	99.095	Taeniopygia_guttata
ENSGALG00000017357	SRSF2	52	92.241	ENSTRUG00000018104	srsf2a	50	92.241	Takifugu_rubripes
ENSGALG00000017357	SRSF2	55	84.553	ENSTRUG00000024363	srsf2b	50	87.611	Takifugu_rubripes
ENSGALG00000017357	SRSF2	52	92.241	ENSTNIG00000001280	srsf2a	51	92.241	Tetraodon_nigroviridis
ENSGALG00000017357	SRSF2	100	98.190	ENSTBEG00000014339	-	100	98.190	Tupaia_belangeri
ENSGALG00000017357	SRSF2	100	98.190	ENSUAMG00000013403	-	100	98.190	Ursus_americanus
ENSGALG00000017357	SRSF2	100	65.158	ENSXETG00000025271	srsf2	52	96.491	Xenopus_tropicalis
ENSGALG00000017357	SRSF2	52	93.103	ENSXCOG00000005917	srsf2a	52	93.103	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005681	spliceosomal complex	-	IEA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0016607	nuclear speck	21873635.	IBA	Component
GO:0036002	pre-mRNA binding	-	IEA	Function
GO:0045292	mRNA cis splicing, via spliceosome	21873635.	IBA	Process