EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000020590 (Gene tree)
Gene ID: 424726
Gene Symbol: SGF29
Alias: CCDC101
Full Name: Gallus gallus SAGA complex associated factor 29 (SGF29)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 4312 bases
Position: chr8:30178113-30182424
Accession: NM_001031298
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000037055	DUF1325	PF07039.11	1.4e-39	1	1
ENSGALP00000049776	DUF1325	PF07039.11	1.4e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000037849	-	1806	-	ENSGALP00000037055	293 (aa)	-	Q5ZL38
ENSGALT00000079423	-	1376	-	ENSGALP00000049776	293 (aa)	-	A0A1D5PAL3

Gene Model

Click here to download ENSGALG00000020590's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000020590's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000020590	SGF29	100	94.539	ENSG00000176476	SGF29	100	94.539	Homo_sapiens
ENSGALG00000020590	SGF29	99	88.621	ENSAPOG00000007072	sgf29	100	88.621	Acanthochromis_polyacanthus
ENSGALG00000020590	SGF29	100	91.468	ENSAMEG00000015388	SGF29	100	91.468	Ailuropoda_melanoleuca
ENSGALG00000020590	SGF29	85	89.558	ENSACIG00000024432	sgf29	100	89.558	Amphilophus_citrinellus
ENSGALG00000020590	SGF29	99	88.621	ENSAOCG00000013494	sgf29	100	88.621	Amphiprion_ocellaris
ENSGALG00000020590	SGF29	86	87.302	ENSAPEG00000007284	sgf29	93	87.302	Amphiprion_percula
ENSGALG00000020590	SGF29	99	88.621	ENSATEG00000017566	sgf29	100	88.621	Anabas_testudineus
ENSGALG00000020590	SGF29	100	92.491	ENSACAG00000006595	SGF29	100	92.491	Anolis_carolinensis
ENSGALG00000020590	SGF29	97	75.789	ENSANAG00000032813	-	96	83.607	Aotus_nancymaae
ENSGALG00000020590	SGF29	99	80.137	ENSANAG00000023337	-	93	80.137	Aotus_nancymaae
ENSGALG00000020590	SGF29	100	94.539	ENSANAG00000037641	-	100	94.539	Aotus_nancymaae
ENSGALG00000020590	SGF29	99	87.241	ENSACLG00000016730	sgf29	100	87.241	Astatotilapia_calliptera
ENSGALG00000020590	SGF29	100	86.957	ENSAMXG00000003395	sgf29	100	86.957	Astyanax_mexicanus
ENSGALG00000020590	SGF29	100	94.198	ENSBTAG00000016883	SGF29	100	94.198	Bos_taurus
ENSGALG00000020590	SGF29	78	36.957	WBGene00021205	Y17G9B.8	89	36.957	Caenorhabditis_elegans
ENSGALG00000020590	SGF29	100	94.539	ENSCJAG00000006577	SGF29	100	94.539	Callithrix_jacchus
ENSGALG00000020590	SGF29	96	94.326	ENSCAFG00000017127	SGF29	92	94.326	Canis_familiaris
ENSGALG00000020590	SGF29	96	94.326	ENSCAFG00020017597	SGF29	92	94.326	Canis_lupus_dingo
ENSGALG00000020590	SGF29	100	94.198	ENSCHIG00000015325	SGF29	100	94.198	Capra_hircus
ENSGALG00000020590	SGF29	84	93.902	ENSTSYG00000003314	-	97	93.902	Carlito_syrichta
ENSGALG00000020590	SGF29	100	94.539	ENSTSYG00000025878	-	100	94.539	Carlito_syrichta
ENSGALG00000020590	SGF29	85	81.818	ENSCAPG00000000732	SGF29	98	81.818	Cavia_aperea
ENSGALG00000020590	SGF29	100	93.174	ENSCPOG00000027037	SGF29	100	93.174	Cavia_porcellus
ENSGALG00000020590	SGF29	100	94.539	ENSCCAG00000027359	-	100	94.539	Cebus_capucinus
ENSGALG00000020590	SGF29	99	71.575	ENSCCAG00000027313	-	66	71.575	Cebus_capucinus
ENSGALG00000020590	SGF29	100	94.539	ENSCATG00000034020	SGF29	100	94.539	Cercocebus_atys
ENSGALG00000020590	SGF29	100	93.857	ENSCLAG00000011510	SGF29	100	93.857	Chinchilla_lanigera
ENSGALG00000020590	SGF29	100	88.963	ENSCSAG00000006259	SGF29	100	88.963	Chlorocebus_sabaeus
ENSGALG00000020590	SGF29	87	61.176	ENSCHOG00000013831	-	100	61.176	Choloepus_hoffmanni
ENSGALG00000020590	SGF29	100	94.539	ENSCPBG00000012638	SGF29	85	94.539	Chrysemys_picta_bellii
ENSGALG00000020590	SGF29	99	60.274	ENSCING00000012953	-	99	60.274	Ciona_intestinalis
ENSGALG00000020590	SGF29	72	55.714	ENSCSAVG00000007328	-	87	55.714	Ciona_savignyi
ENSGALG00000020590	SGF29	85	93.574	ENSCANG00000039654	SGF29	100	93.574	Colobus_angolensis_palliatus
ENSGALG00000020590	SGF29	100	94.198	ENSCGRG00001016730	-	100	94.198	Cricetulus_griseus_chok1gshd
ENSGALG00000020590	SGF29	100	88.776	ENSCGRG00001014941	-	100	88.776	Cricetulus_griseus_chok1gshd
ENSGALG00000020590	SGF29	100	93.857	ENSCGRG00000003808	Sgf29	100	93.857	Cricetulus_griseus_crigri
ENSGALG00000020590	SGF29	82	89.627	ENSCSEG00000010575	sgf29	86	89.669	Cynoglossus_semilaevis
ENSGALG00000020590	SGF29	99	88.276	ENSCVAG00000014381	sgf29	100	88.276	Cyprinodon_variegatus
ENSGALG00000020590	SGF29	100	88.737	ENSDARG00000002339	sgf29	100	88.737	Danio_rerio
ENSGALG00000020590	SGF29	100	94.198	ENSDNOG00000048338	SGF29	99	94.198	Dasypus_novemcinctus
ENSGALG00000020590	SGF29	100	93.857	ENSDORG00000007002	Sgf29	100	93.857	Dipodomys_ordii
ENSGALG00000020590	SGF29	98	48.958	FBgn0050390	Sgf29	94	48.958	Drosophila_melanogaster
ENSGALG00000020590	SGF29	99	79.795	ENSEBUG00000008631	sgf29	98	79.795	Eptatretus_burgeri
ENSGALG00000020590	SGF29	92	95.911	ENSEASG00005014751	SGF29	91	95.911	Equus_asinus_asinus
ENSGALG00000020590	SGF29	100	94.198	ENSECAG00000011445	SGF29	95	94.198	Equus_caballus
ENSGALG00000020590	SGF29	91	95.896	ENSEEUG00000008521	SGF29	100	95.896	Erinaceus_europaeus
ENSGALG00000020590	SGF29	99	89.310	ENSELUG00000023888	sgf29	100	89.310	Esox_lucius
ENSGALG00000020590	SGF29	100	94.198	ENSFCAG00000012297	SGF29	100	94.198	Felis_catus
ENSGALG00000020590	SGF29	100	93.515	ENSFDAG00000012928	SGF29	100	93.515	Fukomys_damarensis
ENSGALG00000020590	SGF29	86	88.095	ENSFHEG00000022427	sgf29	93	88.095	Fundulus_heteroclitus
ENSGALG00000020590	SGF29	99	86.942	ENSGMOG00000000328	sgf29	100	86.942	Gadus_morhua
ENSGALG00000020590	SGF29	99	88.276	ENSGAFG00000020626	sgf29	100	88.276	Gambusia_affinis
ENSGALG00000020590	SGF29	99	85.517	ENSGACG00000015001	sgf29	100	85.517	Gasterosteus_aculeatus
ENSGALG00000020590	SGF29	100	94.198	ENSGAGG00000012655	SGF29	100	94.198	Gopherus_agassizii
ENSGALG00000020590	SGF29	100	93.857	ENSGGOG00000000807	-	100	93.857	Gorilla_gorilla
ENSGALG00000020590	SGF29	81	74.153	ENSHBUG00000013677	sgf29	94	74.153	Haplochromis_burtoni
ENSGALG00000020590	SGF29	100	93.857	ENSHGLG00000014468	SGF29	100	93.857	Heterocephalus_glaber_female
ENSGALG00000020590	SGF29	100	93.857	ENSHGLG00100000132	SGF29	100	93.857	Heterocephalus_glaber_male
ENSGALG00000020590	SGF29	99	90.000	ENSHCOG00000002018	sgf29	100	90.000	Hippocampus_comes
ENSGALG00000020590	SGF29	100	88.737	ENSIPUG00000001851	sgf29	100	88.737	Ictalurus_punctatus
ENSGALG00000020590	SGF29	100	94.198	ENSSTOG00000013258	SGF29	100	94.198	Ictidomys_tridecemlineatus
ENSGALG00000020590	SGF29	100	94.198	ENSJJAG00000009013	Sgf29	100	94.198	Jaculus_jaculus
ENSGALG00000020590	SGF29	99	86.897	ENSKMAG00000004341	sgf29	100	87.097	Kryptolebias_marmoratus
ENSGALG00000020590	SGF29	85	89.600	ENSLBEG00000006754	sgf29	100	89.600	Labrus_bergylta
ENSGALG00000020590	SGF29	83	79.424	ENSLACG00000005336	SGF29	99	79.424	Latimeria_chalumnae
ENSGALG00000020590	SGF29	100	94.198	ENSLAFG00000028439	SGF29	100	94.198	Loxodonta_africana
ENSGALG00000020590	SGF29	100	94.539	ENSMFAG00000038040	SGF29	100	94.539	Macaca_fascicularis
ENSGALG00000020590	SGF29	100	94.539	ENSMMUG00000011370	SGF29	100	94.539	Macaca_mulatta
ENSGALG00000020590	SGF29	100	94.198	ENSMNEG00000043534	SGF29	100	94.198	Macaca_nemestrina
ENSGALG00000020590	SGF29	100	94.539	ENSMLEG00000031039	SGF29	100	94.539	Mandrillus_leucophaeus
ENSGALG00000020590	SGF29	99	88.621	ENSMAMG00000017907	sgf29	100	88.621	Mastacembelus_armatus
ENSGALG00000020590	SGF29	99	87.241	ENSMZEG00005002947	sgf29	100	87.241	Maylandia_zebra
ENSGALG00000020590	SGF29	99	87.241	ENSMZEG00005001194	sgf29	100	87.241	Maylandia_zebra
ENSGALG00000020590	SGF29	100	100.000	ENSMGAG00000012201	SGF29	100	100.000	Meleagris_gallopavo
ENSGALG00000020590	SGF29	100	94.198	ENSMAUG00000011063	Sgf29	100	94.198	Mesocricetus_auratus
ENSGALG00000020590	SGF29	100	94.539	ENSMICG00000009973	SGF29	100	94.539	Microcebus_murinus
ENSGALG00000020590	SGF29	100	94.198	ENSMOCG00000021358	Sgf29	100	94.198	Microtus_ochrogaster
ENSGALG00000020590	SGF29	85	87.747	ENSMMOG00000012706	sgf29	100	87.747	Mola_mola
ENSGALG00000020590	SGF29	100	93.174	ENSMODG00000015642	SGF29	100	93.174	Monodelphis_domestica
ENSGALG00000020590	SGF29	99	88.621	ENSMALG00000000231	sgf29	96	88.621	Monopterus_albus
ENSGALG00000020590	SGF29	100	93.515	MGP_CAROLIEiJ_G0030456	Sgf29	100	93.515	Mus_caroli
ENSGALG00000020590	SGF29	100	93.515	ENSMUSG00000030714	Sgf29	100	93.515	Mus_musculus
ENSGALG00000020590	SGF29	100	93.515	MGP_PahariEiJ_G0013666	Sgf29	100	93.515	Mus_pahari
ENSGALG00000020590	SGF29	100	93.515	MGP_SPRETEiJ_G0031570	Sgf29	100	93.515	Mus_spretus
ENSGALG00000020590	SGF29	100	94.198	ENSMPUG00000012669	SGF29	100	94.198	Mustela_putorius_furo
ENSGALG00000020590	SGF29	100	94.198	ENSMLUG00000022554	SGF29	100	94.198	Myotis_lucifugus
ENSGALG00000020590	SGF29	100	93.857	ENSNGAG00000022634	Sgf29	100	93.857	Nannospalax_galili
ENSGALG00000020590	SGF29	85	89.157	ENSNBRG00000020775	sgf29	100	89.157	Neolamprologus_brichardi
ENSGALG00000020590	SGF29	99	83.562	ENSNLEG00000001604	SGF29	99	83.562	Nomascus_leucogenys
ENSGALG00000020590	SGF29	76	94.000	ENSMEUG00000006221	SGF29	76	94.000	Notamacropus_eugenii
ENSGALG00000020590	SGF29	100	94.539	ENSOPRG00000009316	SGF29	100	94.539	Ochotona_princeps
ENSGALG00000020590	SGF29	100	93.515	ENSODEG00000013702	SGF29	100	93.515	Octodon_degus
ENSGALG00000020590	SGF29	99	87.285	ENSONIG00000009377	sgf29	100	87.285	Oreochromis_niloticus
ENSGALG00000020590	SGF29	68	94.444	ENSOANG00000009696	SGF29	100	94.444	Ornithorhynchus_anatinus
ENSGALG00000020590	SGF29	92	95.556	ENSOCUG00000025361	-	100	95.556	Oryctolagus_cuniculus
ENSGALG00000020590	SGF29	83	74.180	ENSOCUG00000021684	-	100	74.180	Oryctolagus_cuniculus
ENSGALG00000020590	SGF29	99	87.586	ENSORLG00000027873	sgf29	100	87.586	Oryzias_latipes
ENSGALG00000020590	SGF29	99	87.586	ENSORLG00020020976	-	100	87.586	Oryzias_latipes_hni
ENSGALG00000020590	SGF29	99	87.586	ENSORLG00015011795	sgf29	100	87.586	Oryzias_latipes_hsok
ENSGALG00000020590	SGF29	99	87.586	ENSOMEG00000020118	sgf29	100	87.586	Oryzias_melastigma
ENSGALG00000020590	SGF29	100	63.605	ENSOGAG00000034571	-	100	63.605	Otolemur_garnettii
ENSGALG00000020590	SGF29	100	87.713	ENSOGAG00000015794	-	100	87.713	Otolemur_garnettii
ENSGALG00000020590	SGF29	100	94.198	ENSOARG00000003226	SGF29	100	94.198	Ovis_aries
ENSGALG00000020590	SGF29	96	94.662	ENSPPAG00000039380	SGF29	99	94.650	Pan_paniscus
ENSGALG00000020590	SGF29	100	94.198	ENSPPRG00000006831	SGF29	100	94.198	Panthera_pardus
ENSGALG00000020590	SGF29	100	94.198	ENSPTIG00000014381	SGF29	100	94.198	Panthera_tigris_altaica
ENSGALG00000020590	SGF29	100	71.672	ENSPTRG00000007925	SGF29	100	71.572	Pan_troglodytes
ENSGALG00000020590	SGF29	100	94.539	ENSPANG00000019684	SGF29	100	94.539	Papio_anubis
ENSGALG00000020590	SGF29	100	84.642	ENSPKIG00000018503	sgf29	100	84.642	Paramormyrops_kingsleyae
ENSGALG00000020590	SGF29	99	82.759	ENSPMGG00000006683	sgf29	99	82.759	Periophthalmus_magnuspinnatus
ENSGALG00000020590	SGF29	100	93.174	ENSPCIG00000025200	SGF29	100	93.174	Phascolarctos_cinereus
ENSGALG00000020590	SGF29	99	88.621	ENSPFOG00000010035	sgf29	99	88.621	Poecilia_formosa
ENSGALG00000020590	SGF29	99	88.621	ENSPLAG00000000559	sgf29	100	88.621	Poecilia_latipinna
ENSGALG00000020590	SGF29	99	88.621	ENSPMEG00000007026	sgf29	100	88.621	Poecilia_mexicana
ENSGALG00000020590	SGF29	99	88.966	ENSPREG00000011868	sgf29	100	88.966	Poecilia_reticulata
ENSGALG00000020590	SGF29	100	94.539	ENSPPYG00000007233	SGF29	100	94.539	Pongo_abelii
ENSGALG00000020590	SGF29	100	94.539	ENSPCOG00000028233	SGF29	100	94.539	Propithecus_coquereli
ENSGALG00000020590	SGF29	85	89.157	ENSPNYG00000012353	sgf29	100	89.157	Pundamilia_nyererei
ENSGALG00000020590	SGF29	85	90.763	ENSPNAG00000014651	sgf29	100	90.763	Pygocentrus_nattereri
ENSGALG00000020590	SGF29	100	93.857	ENSRNOG00000019245	Sgf29	100	93.857	Rattus_norvegicus
ENSGALG00000020590	SGF29	100	94.539	ENSRBIG00000041003	SGF29	100	94.539	Rhinopithecus_bieti
ENSGALG00000020590	SGF29	100	94.539	ENSRROG00000044894	SGF29	100	94.539	Rhinopithecus_roxellana
ENSGALG00000020590	SGF29	91	96.241	ENSSBOG00000008004	SGF29	100	96.386	Saimiri_boliviensis_boliviensis
ENSGALG00000020590	SGF29	100	93.174	ENSSHAG00000011279	-	100	93.174	Sarcophilus_harrisii
ENSGALG00000020590	SGF29	81	64.135	ENSSHAG00000002930	-	100	64.135	Sarcophilus_harrisii
ENSGALG00000020590	SGF29	100	84.300	ENSSFOG00015001254	sgf29	100	84.300	Scleropages_formosus
ENSGALG00000020590	SGF29	99	88.966	ENSSMAG00000016613	sgf29	100	88.966	Scophthalmus_maximus
ENSGALG00000020590	SGF29	99	88.621	ENSSDUG00000005977	sgf29	100	88.621	Seriola_dumerili
ENSGALG00000020590	SGF29	99	88.621	ENSSLDG00000012446	sgf29	100	88.621	Seriola_lalandi_dorsalis
ENSGALG00000020590	SGF29	100	94.881	ENSSPUG00000010121	SGF29	100	94.881	Sphenodon_punctatus
ENSGALG00000020590	SGF29	99	88.621	ENSSPAG00000018994	sgf29	100	88.621	Stegastes_partitus
ENSGALG00000020590	SGF29	100	94.198	ENSSSCG00000022778	SGF29	100	94.198	Sus_scrofa
ENSGALG00000020590	SGF29	99	88.966	ENSTNIG00000001984	sgf29	99	88.966	Tetraodon_nigroviridis
ENSGALG00000020590	SGF29	96	89.007	ENSTNIG00000006496	SGF29	100	89.007	Tetraodon_nigroviridis
ENSGALG00000020590	SGF29	97	92.982	ENSUAMG00000010172	SGF29	85	95.911	Ursus_americanus
ENSGALG00000020590	SGF29	88	95.349	ENSUMAG00000010966	SGF29	79	95.349	Ursus_maritimus
ENSGALG00000020590	SGF29	100	92.150	ENSXETG00000033185	sgf29	100	92.150	Xenopus_tropicalis
ENSGALG00000020590	SGF29	99	88.316	ENSXCOG00000011501	sgf29	100	88.316	Xiphophorus_couchianus
ENSGALG00000020590	SGF29	99	88.621	ENSXMAG00000010932	sgf29	100	88.621	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000124	SAGA complex	21873635.	IBA	Component
GO:0001135	RNA polymerase II transcription regulator recruiting activity	21873635.	IBA	Function
GO:0005671	Ada2/Gcn5/Ada3 transcription activator complex	21873635.	IBA	Component
GO:0005671	Ada2/Gcn5/Ada3 transcription activator complex	-	ISS	Component
GO:0016573	histone acetylation	-	ISS	Process
GO:0035064	methylated histone binding	21873635.	IBA	Function
GO:0035064	methylated histone binding	-	ISS	Function
GO:0043966	histone H3 acetylation	21873635.	IBA	Process
GO:0051123	RNA polymerase II preinitiation complex assembly	-	IEA	Process
GO:0070461	SAGA-type complex	-	ISS	Component