EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000023135 (Gene tree)
Gene ID: 423322
Gene Symbol: SRP54
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 13014 bases
Position: chr5:36286791-36299804
Accession: 423322
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000016308	SRP54	PF00448.22	2.6e-77	1	1
ENSGALP00000016308	SRP54_N	PF02881.19	1.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000016327	SRP54-201	2030	-	ENSGALP00000016308	504 (aa)	XP_025006849	E1C6G6

Gene Model

Click here to download ENSGALG00000023135's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000023135's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000023135	SRP54	100	98.810	ENSG00000100883	SRP54	100	100.000	Homo_sapiens
ENSGALG00000023135	SRP54	100	95.437	ENSAPOG00000011314	srp54	100	95.437	Acanthochromis_polyacanthus
ENSGALG00000023135	SRP54	100	98.810	ENSAMEG00000015544	SRP54	100	98.810	Ailuropoda_melanoleuca
ENSGALG00000023135	SRP54	89	93.987	ENSACIG00000022831	srp54	97	93.987	Amphilophus_citrinellus
ENSGALG00000023135	SRP54	100	95.437	ENSAOCG00000019401	srp54	100	95.437	Amphiprion_ocellaris
ENSGALG00000023135	SRP54	100	95.437	ENSAPEG00000001977	srp54	100	95.437	Amphiprion_percula
ENSGALG00000023135	SRP54	100	95.833	ENSATEG00000013877	srp54	100	95.833	Anabas_testudineus
ENSGALG00000023135	SRP54	94	100.000	ENSAPLG00000010125	SRP54	95	100.000	Anas_platyrhynchos
ENSGALG00000023135	SRP54	86	96.083	ENSACAG00000010631	-	100	96.083	Anolis_carolinensis
ENSGALG00000023135	SRP54	100	99.008	ENSACAG00000002103	-	100	99.008	Anolis_carolinensis
ENSGALG00000023135	SRP54	65	82.175	ENSACAG00000001124	-	100	82.175	Anolis_carolinensis
ENSGALG00000023135	SRP54	100	98.810	ENSANAG00000022133	SRP54	100	98.810	Aotus_nancymaae
ENSGALG00000023135	SRP54	100	95.635	ENSACLG00000015866	srp54	100	95.635	Astatotilapia_calliptera
ENSGALG00000023135	SRP54	100	95.635	ENSAMXG00000032669	SRP54	100	95.635	Astyanax_mexicanus
ENSGALG00000023135	SRP54	100	98.810	ENSBTAG00000019085	SRP54	100	98.810	Bos_taurus
ENSGALG00000023135	SRP54	98	71.285	WBGene00009012	F21D5.7	100	71.285	Caenorhabditis_elegans
ENSGALG00000023135	SRP54	100	98.810	ENSCJAG00000006581	SRP54	100	98.810	Callithrix_jacchus
ENSGALG00000023135	SRP54	100	98.810	ENSCAFG00000013331	SRP54	100	98.810	Canis_familiaris
ENSGALG00000023135	SRP54	100	98.810	ENSCAFG00020023427	SRP54	100	98.810	Canis_lupus_dingo
ENSGALG00000023135	SRP54	100	98.810	ENSCHIG00000026345	SRP54	100	98.810	Capra_hircus
ENSGALG00000023135	SRP54	100	99.008	ENSTSYG00000002680	-	100	99.008	Carlito_syrichta
ENSGALG00000023135	SRP54	94	87.789	ENSTSYG00000035333	-	93	87.789	Carlito_syrichta
ENSGALG00000023135	SRP54	94	63.469	ENSCAPG00000008780	SRP54	100	63.469	Cavia_aperea
ENSGALG00000023135	SRP54	100	98.413	ENSCPOG00000003691	SRP54	100	98.413	Cavia_porcellus
ENSGALG00000023135	SRP54	90	98.333	ENSCCAG00000024179	SRP54	100	98.568	Cebus_capucinus
ENSGALG00000023135	SRP54	100	98.810	ENSCATG00000034083	SRP54	100	98.810	Cercocebus_atys
ENSGALG00000023135	SRP54	100	98.810	ENSCLAG00000015076	SRP54	100	98.810	Chinchilla_lanigera
ENSGALG00000023135	SRP54	100	98.810	ENSCSAG00000015575	SRP54	100	98.810	Chlorocebus_sabaeus
ENSGALG00000023135	SRP54	95	86.694	ENSCHOG00000008986	SRP54	100	86.694	Choloepus_hoffmanni
ENSGALG00000023135	SRP54	100	99.603	ENSCPBG00000026195	SRP54	100	99.603	Chrysemys_picta_bellii
ENSGALG00000023135	SRP54	100	81.349	ENSCING00000007380	-	100	81.349	Ciona_intestinalis
ENSGALG00000023135	SRP54	100	98.810	ENSCANG00000028532	SRP54	100	98.810	Colobus_angolensis_palliatus
ENSGALG00000023135	SRP54	100	98.413	ENSCGRG00001009525	-	100	98.413	Cricetulus_griseus_chok1gshd
ENSGALG00000023135	SRP54	76	98.701	ENSCGRG00000009453	-	89	98.701	Cricetulus_griseus_crigri
ENSGALG00000023135	SRP54	100	94.643	ENSCSEG00000012392	srp54	100	94.643	Cynoglossus_semilaevis
ENSGALG00000023135	SRP54	100	95.437	ENSCVAG00000010395	srp54	100	95.437	Cyprinodon_variegatus
ENSGALG00000023135	SRP54	100	95.635	ENSDARG00000098367	srp54	100	95.635	Danio_rerio
ENSGALG00000023135	SRP54	100	98.810	ENSDNOG00000032525	SRP54	100	98.810	Dasypus_novemcinctus
ENSGALG00000023135	SRP54	89	84.513	ENSDORG00000005159	-	98	84.513	Dipodomys_ordii
ENSGALG00000023135	SRP54	96	77.320	FBgn0010747	Srp54k	98	76.908	Drosophila_melanogaster
ENSGALG00000023135	SRP54	100	97.619	ENSETEG00000016307	-	100	97.619	Echinops_telfairi
ENSGALG00000023135	SRP54	83	56.938	ENSETEG00000012102	-	99	56.938	Echinops_telfairi
ENSGALG00000023135	SRP54	100	87.302	ENSEBUG00000009437	-	100	87.302	Eptatretus_burgeri
ENSGALG00000023135	SRP54	100	98.810	ENSEASG00005002057	SRP54	100	98.810	Equus_asinus_asinus
ENSGALG00000023135	SRP54	99	98.594	ENSECAG00000018042	SRP54	98	98.594	Equus_caballus
ENSGALG00000023135	SRP54	100	82.540	ENSEEUG00000001511	SRP54	100	82.540	Erinaceus_europaeus
ENSGALG00000023135	SRP54	100	94.841	ENSELUG00000003395	srp54	100	94.841	Esox_lucius
ENSGALG00000023135	SRP54	100	98.611	ENSFCAG00000032033	SRP54	100	98.611	Felis_catus
ENSGALG00000023135	SRP54	100	100.000	ENSFALG00000005995	SRP54	100	100.000	Ficedula_albicollis
ENSGALG00000023135	SRP54	100	98.810	ENSFDAG00000016767	SRP54	100	98.810	Fukomys_damarensis
ENSGALG00000023135	SRP54	100	95.040	ENSFHEG00000004263	srp54	100	95.040	Fundulus_heteroclitus
ENSGALG00000023135	SRP54	95	89.749	ENSGMOG00000011391	srp54	100	89.749	Gadus_morhua
ENSGALG00000023135	SRP54	100	95.635	ENSGAFG00000011586	srp54	100	95.635	Gambusia_affinis
ENSGALG00000023135	SRP54	100	95.040	ENSGACG00000004181	srp54	100	95.040	Gasterosteus_aculeatus
ENSGALG00000023135	SRP54	100	99.603	ENSGAGG00000014766	SRP54	100	99.603	Gopherus_agassizii
ENSGALG00000023135	SRP54	100	98.810	ENSGGOG00000002926	SRP54	100	98.810	Gorilla_gorilla
ENSGALG00000023135	SRP54	100	95.635	ENSHBUG00000005678	srp54	100	95.635	Haplochromis_burtoni
ENSGALG00000023135	SRP54	100	98.810	ENSHGLG00000002850	SRP54	100	98.810	Heterocephalus_glaber_female
ENSGALG00000023135	SRP54	100	68.119	ENSHGLG00100007281	-	100	68.119	Heterocephalus_glaber_male
ENSGALG00000023135	SRP54	100	98.810	ENSHGLG00100005263	SRP54	100	98.810	Heterocephalus_glaber_male
ENSGALG00000023135	SRP54	100	93.651	ENSHCOG00000021127	srp54	100	93.651	Hippocampus_comes
ENSGALG00000023135	SRP54	100	95.238	ENSIPUG00000001420	srp54	100	95.238	Ictalurus_punctatus
ENSGALG00000023135	SRP54	100	98.810	ENSSTOG00000016023	SRP54	100	98.810	Ictidomys_tridecemlineatus
ENSGALG00000023135	SRP54	100	93.651	ENSJJAG00000013417	-	100	93.651	Jaculus_jaculus
ENSGALG00000023135	SRP54	87	75.909	ENSJJAG00000016404	-	100	75.909	Jaculus_jaculus
ENSGALG00000023135	SRP54	100	95.040	ENSKMAG00000007707	srp54	100	95.040	Kryptolebias_marmoratus
ENSGALG00000023135	SRP54	100	95.437	ENSLBEG00000021122	srp54	100	95.437	Labrus_bergylta
ENSGALG00000023135	SRP54	100	95.437	ENSLBEG00000018690	srp54	100	95.437	Labrus_bergylta
ENSGALG00000023135	SRP54	100	96.032	ENSLACG00000017890	SRP54	100	96.032	Latimeria_chalumnae
ENSGALG00000023135	SRP54	100	96.429	ENSLOCG00000009440	srp54	100	96.429	Lepisosteus_oculatus
ENSGALG00000023135	SRP54	100	98.810	ENSLAFG00000012007	SRP54	100	98.810	Loxodonta_africana
ENSGALG00000023135	SRP54	100	98.810	ENSMFAG00000044371	SRP54	100	98.810	Macaca_fascicularis
ENSGALG00000023135	SRP54	100	98.810	ENSMMUG00000015073	FAM177A1	100	98.810	Macaca_mulatta
ENSGALG00000023135	SRP54	100	98.810	ENSMNEG00000006947	SRP54	100	98.810	Macaca_nemestrina
ENSGALG00000023135	SRP54	100	98.810	ENSMLEG00000042251	SRP54	100	98.810	Mandrillus_leucophaeus
ENSGALG00000023135	SRP54	100	95.635	ENSMAMG00000004803	srp54	100	95.635	Mastacembelus_armatus
ENSGALG00000023135	SRP54	100	95.635	ENSMZEG00005027528	srp54	100	95.635	Maylandia_zebra
ENSGALG00000023135	SRP54	100	95.257	ENSMGAG00000012481	SRP54	100	95.257	Meleagris_gallopavo
ENSGALG00000023135	SRP54	100	98.611	ENSMAUG00000014447	-	100	98.611	Mesocricetus_auratus
ENSGALG00000023135	SRP54	100	98.810	ENSMICG00000010270	SRP54	100	98.810	Microcebus_murinus
ENSGALG00000023135	SRP54	87	98.409	ENSMOCG00000000948	-	100	98.409	Microtus_ochrogaster
ENSGALG00000023135	SRP54	90	92.511	ENSMMOG00000020303	srp54	99	92.511	Mola_mola
ENSGALG00000023135	SRP54	100	98.611	ENSMODG00000012925	-	100	98.611	Monodelphis_domestica
ENSGALG00000023135	SRP54	100	98.611	ENSMODG00000023150	-	100	98.611	Monodelphis_domestica
ENSGALG00000023135	SRP54	88	94.808	ENSMALG00000009163	srp54	98	94.808	Monopterus_albus
ENSGALG00000023135	SRP54	100	98.611	MGP_CAROLIEiJ_G0017754	-	100	98.611	Mus_caroli
ENSGALG00000023135	SRP54	100	98.611	ENSMUSG00000112449	Srp54b	100	98.611	Mus_musculus
ENSGALG00000023135	SRP54	100	97.817	ENSMUSG00000079108	Srp54c	100	97.817	Mus_musculus
ENSGALG00000023135	SRP54	100	98.611	ENSMUSG00000073079	Srp54a	100	99.091	Mus_musculus
ENSGALG00000023135	SRP54	100	98.611	MGP_PahariEiJ_G0029510	-	100	98.611	Mus_pahari
ENSGALG00000023135	SRP54	100	98.810	ENSMPUG00000016302	SRP54	100	98.810	Mustela_putorius_furo
ENSGALG00000023135	SRP54	100	98.214	ENSMLUG00000008958	SRP54	100	98.214	Myotis_lucifugus
ENSGALG00000023135	SRP54	100	88.690	ENSNGAG00000019806	-	100	88.690	Nannospalax_galili
ENSGALG00000023135	SRP54	87	95.227	ENSNBRG00000006000	srp54	100	95.227	Neolamprologus_brichardi
ENSGALG00000023135	SRP54	100	98.810	ENSNLEG00000003496	SRP54	100	98.810	Nomascus_leucogenys
ENSGALG00000023135	SRP54	67	100.000	ENSMEUG00000000138	-	76	100.000	Notamacropus_eugenii
ENSGALG00000023135	SRP54	58	100.000	ENSOPRG00000014502	-	60	100.000	Ochotona_princeps
ENSGALG00000023135	SRP54	100	98.810	ENSODEG00000004865	SRP54	100	98.810	Octodon_degus
ENSGALG00000023135	SRP54	100	95.635	ENSONIG00000011768	srp54	100	95.635	Oreochromis_niloticus
ENSGALG00000023135	SRP54	100	98.810	ENSOANG00000014051	SRP54	100	98.810	Ornithorhynchus_anatinus
ENSGALG00000023135	SRP54	100	98.413	ENSOCUG00000007838	SRP54	100	98.413	Oryctolagus_cuniculus
ENSGALG00000023135	SRP54	100	95.437	ENSORLG00000010027	srp54	100	95.437	Oryzias_latipes
ENSGALG00000023135	SRP54	100	95.437	ENSORLG00020001878	srp54	100	95.437	Oryzias_latipes_hni
ENSGALG00000023135	SRP54	100	95.437	ENSORLG00015021866	srp54	100	95.437	Oryzias_latipes_hsok
ENSGALG00000023135	SRP54	100	95.238	ENSOMEG00000020952	srp54	100	95.238	Oryzias_melastigma
ENSGALG00000023135	SRP54	100	98.810	ENSOGAG00000012188	SRP54	100	98.810	Otolemur_garnettii
ENSGALG00000023135	SRP54	100	98.810	ENSOARG00000007160	SRP54	100	98.810	Ovis_aries
ENSGALG00000023135	SRP54	100	98.810	ENSPPAG00000017434	SRP54	100	98.810	Pan_paniscus
ENSGALG00000023135	SRP54	100	97.619	ENSPPRG00000014047	SRP54	100	97.619	Panthera_pardus
ENSGALG00000023135	SRP54	100	98.611	ENSPTIG00000000744	SRP54	96	98.611	Panthera_tigris_altaica
ENSGALG00000023135	SRP54	100	98.810	ENSPTRG00000006259	FAM177A1	100	98.810	Pan_troglodytes
ENSGALG00000023135	SRP54	100	98.810	ENSPANG00000023853	SRP54	100	98.810	Papio_anubis
ENSGALG00000023135	SRP54	100	95.238	ENSPKIG00000001953	srp54	100	95.238	Paramormyrops_kingsleyae
ENSGALG00000023135	SRP54	100	99.405	ENSPSIG00000006476	SRP54	100	99.405	Pelodiscus_sinensis
ENSGALG00000023135	SRP54	91	92.174	ENSPMGG00000004127	srp54	99	92.174	Periophthalmus_magnuspinnatus
ENSGALG00000023135	SRP54	100	86.508	ENSPEMG00000019634	-	100	86.508	Peromyscus_maniculatus_bairdii
ENSGALG00000023135	SRP54	100	88.492	ENSPMAG00000006078	-	100	88.492	Petromyzon_marinus
ENSGALG00000023135	SRP54	100	98.611	ENSPCIG00000016175	SRP54	100	98.611	Phascolarctos_cinereus
ENSGALG00000023135	SRP54	100	95.635	ENSPFOG00000008870	srp54	100	95.635	Poecilia_formosa
ENSGALG00000023135	SRP54	100	95.635	ENSPLAG00000009889	srp54	100	95.635	Poecilia_latipinna
ENSGALG00000023135	SRP54	100	95.635	ENSPMEG00000008601	srp54	100	95.635	Poecilia_mexicana
ENSGALG00000023135	SRP54	100	95.635	ENSPREG00000004505	srp54	100	95.635	Poecilia_reticulata
ENSGALG00000023135	SRP54	100	93.651	ENSPPYG00000005739	SRP54	100	93.651	Pongo_abelii
ENSGALG00000023135	SRP54	100	94.643	ENSPCAG00000006268	SRP54	100	94.643	Procavia_capensis
ENSGALG00000023135	SRP54	100	96.832	ENSPCOG00000022473	SRP54	100	96.832	Propithecus_coquereli
ENSGALG00000023135	SRP54	63	100.000	ENSPVAG00000010056	SRP54	82	100.000	Pteropus_vampyrus
ENSGALG00000023135	SRP54	100	95.635	ENSPNYG00000009717	srp54	100	95.635	Pundamilia_nyererei
ENSGALG00000023135	SRP54	100	95.833	ENSPNAG00000008544	srp54	100	95.833	Pygocentrus_nattereri
ENSGALG00000023135	SRP54	100	98.810	ENSRNOG00000032776	Srp54a	100	98.810	Rattus_norvegicus
ENSGALG00000023135	SRP54	100	98.810	ENSRROG00000041292	SRP54	100	98.810	Rhinopithecus_roxellana
ENSGALG00000023135	SRP54	86	52.834	YPR088C	SRP54	95	48.084	Saccharomyces_cerevisiae
ENSGALG00000023135	SRP54	94	98.734	ENSSBOG00000035145	SRP54	100	98.734	Saimiri_boliviensis_boliviensis
ENSGALG00000023135	SRP54	68	99.125	ENSSHAG00000000671	SRP54	100	99.125	Sarcophilus_harrisii
ENSGALG00000023135	SRP54	100	95.833	ENSSFOG00015013920	srp54	100	95.833	Scleropages_formosus
ENSGALG00000023135	SRP54	100	89.513	ENSSMAG00000002441	srp54	100	89.513	Scophthalmus_maximus
ENSGALG00000023135	SRP54	100	95.238	ENSSDUG00000018586	srp54	100	95.238	Seriola_dumerili
ENSGALG00000023135	SRP54	100	95.040	ENSSLDG00000010476	srp54	100	95.040	Seriola_lalandi_dorsalis
ENSGALG00000023135	SRP54	100	98.810	ENSSARG00000002744	SRP54	100	98.810	Sorex_araneus
ENSGALG00000023135	SRP54	100	99.603	ENSSPUG00000013101	SRP54	100	99.603	Sphenodon_punctatus
ENSGALG00000023135	SRP54	100	95.437	ENSSPAG00000002354	srp54	100	95.437	Stegastes_partitus
ENSGALG00000023135	SRP54	100	98.810	ENSSSCG00000001955	SRP54	100	98.810	Sus_scrofa
ENSGALG00000023135	SRP54	94	100.000	ENSTGUG00000011945	-	95	100.000	Taeniopygia_guttata
ENSGALG00000023135	SRP54	100	94.643	ENSTRUG00000007057	srp54	100	94.643	Takifugu_rubripes
ENSGALG00000023135	SRP54	100	94.246	ENSTNIG00000002589	srp54	100	94.246	Tetraodon_nigroviridis
ENSGALG00000023135	SRP54	89	90.157	ENSTBEG00000011409	SRP54	100	90.157	Tupaia_belangeri
ENSGALG00000023135	SRP54	100	88.690	ENSTTRG00000000928	SRP54	100	88.690	Tursiops_truncatus
ENSGALG00000023135	SRP54	52	98.855	ENSUAMG00000012385	SRP54	100	98.855	Ursus_americanus
ENSGALG00000023135	SRP54	100	98.810	ENSUMAG00000011234	SRP54	100	98.810	Ursus_maritimus
ENSGALG00000023135	SRP54	94	98.523	ENSVPAG00000005668	SRP54	100	98.523	Vicugna_pacos
ENSGALG00000023135	SRP54	100	98.810	ENSVVUG00000019962	SRP54	100	98.810	Vulpes_vulpes
ENSGALG00000023135	SRP54	100	81.854	ENSXETG00000012290	srp54	100	81.854	Xenopus_tropicalis
ENSGALG00000023135	SRP54	88	95.260	ENSXCOG00000004658	srp54	96	95.260	Xiphophorus_couchianus
ENSGALG00000023135	SRP54	100	95.635	ENSXMAG00000018315	srp54	100	95.635	Xiphophorus_maculatus