EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000026081 (Gene tree)
Gene ID: 768866
Gene Symbol: RBM38
Alias: -
Full Name: Gallus gallus RNA binding motif protein 38 (RBM38)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 13672 bases
Position: chr20:11615331-11629002
Accession: NM_001305093
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000042182	RRM_1	PF00076.22	3.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000045333	-	2585	-	ENSGALP00000042182	215 (aa)	-	Q5ZJX4

Gene Model

Click here to download ENSGALG00000026081's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000026081's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000026081	RBM38	100	79.817	ENSG00000132819	RBM38	94	91.379	Homo_sapiens
ENSGALG00000026081	RBM38	99	69.767	ENSAPOG00000009939	-	92	70.370	Acanthochromis_polyacanthus
ENSGALG00000026081	RBM38	100	57.384	ENSAPOG00000003301	rbm38	93	57.983	Acanthochromis_polyacanthus
ENSGALG00000026081	RBM38	100	68.778	ENSACIG00000012502	-	100	86.325	Amphilophus_citrinellus
ENSGALG00000026081	RBM38	100	56.303	ENSACIG00000000010	rbm38	93	56.303	Amphilophus_citrinellus
ENSGALG00000026081	RBM38	100	57.806	ENSAOCG00000013497	-	93	58.403	Amphiprion_ocellaris
ENSGALG00000026081	RBM38	98	68.692	ENSAOCG00000012559	RBM38	88	70.233	Amphiprion_ocellaris
ENSGALG00000026081	RBM38	99	64.935	ENSAPEG00000023581	-	93	67.826	Amphiprion_percula
ENSGALG00000026081	RBM38	100	61.261	ENSAPEG00000013137	rbm38	93	58.403	Amphiprion_percula
ENSGALG00000026081	RBM38	100	60.714	ENSATEG00000016366	rbm38	94	60.538	Anabas_testudineus
ENSGALG00000026081	RBM38	99	66.667	ENSATEG00000016710	-	93	66.379	Anabas_testudineus
ENSGALG00000026081	RBM38	100	84.259	ENSACAG00000016238	RBM38	90	84.259	Anolis_carolinensis
ENSGALG00000026081	RBM38	100	79.358	ENSANAG00000031959	RBM38	100	79.358	Aotus_nancymaae
ENSGALG00000026081	RBM38	100	67.094	ENSACLG00000019514	-	95	65.957	Astatotilapia_calliptera
ENSGALG00000026081	RBM38	99	67.699	ENSAMXG00000015601	-	92	69.369	Astyanax_mexicanus
ENSGALG00000026081	RBM38	97	60.455	ENSAMXG00000038120	rbm38	71	69.412	Astyanax_mexicanus
ENSGALG00000026081	RBM38	100	78.440	ENSBTAG00000008105	RBM38	90	78.440	Bos_taurus
ENSGALG00000026081	RBM38	60	66.154	WBGene00006321	sup-12	59	85.393	Caenorhabditis_elegans
ENSGALG00000026081	RBM38	100	80.275	ENSCJAG00000019139	RBM38	81	94.898	Callithrix_jacchus
ENSGALG00000026081	RBM38	100	81.193	ENSCAFG00020021943	RBM38	90	81.193	Canis_lupus_dingo
ENSGALG00000026081	RBM38	100	77.982	ENSCHIG00000002609	RBM38	90	78.440	Capra_hircus
ENSGALG00000026081	RBM38	100	79.358	ENSCPOG00000012781	RBM38	90	79.358	Cavia_porcellus
ENSGALG00000026081	RBM38	100	80.275	ENSCCAG00000036872	RBM38	81	94.898	Cebus_capucinus
ENSGALG00000026081	RBM38	100	79.358	ENSCATG00000032133	RBM38	81	94.898	Cercocebus_atys
ENSGALG00000026081	RBM38	100	78.440	ENSCLAG00000005906	RBM38	94	78.440	Chinchilla_lanigera
ENSGALG00000026081	RBM38	100	79.358	ENSCSAG00000015503	RBM38	90	79.358	Chlorocebus_sabaeus
ENSGALG00000026081	RBM38	100	95.349	ENSCPBG00000024059	RBM38	100	95.349	Chrysemys_picta_bellii
ENSGALG00000026081	RBM38	69	61.783	ENSCING00000025102	-	68	61.783	Ciona_intestinalis
ENSGALG00000026081	RBM38	72	63.125	ENSCSAVG00000001132	-	63	62.130	Ciona_savignyi
ENSGALG00000026081	RBM38	100	61.468	ENSCANG00000030105	-	79	61.009	Colobus_angolensis_palliatus
ENSGALG00000026081	RBM38	100	76.606	ENSCGRG00001012928	Rbm38	91	77.064	Cricetulus_griseus_chok1gshd
ENSGALG00000026081	RBM38	100	68.778	ENSCSEG00000004701	-	94	70.721	Cynoglossus_semilaevis
ENSGALG00000026081	RBM38	71	64.516	ENSCSEG00000020943	rbm38	62	59.474	Cynoglossus_semilaevis
ENSGALG00000026081	RBM38	85	63.298	ENSCVAG00000015952	rbm38	92	55.319	Cyprinodon_variegatus
ENSGALG00000026081	RBM38	99	67.241	ENSCVAG00000005472	-	93	66.379	Cyprinodon_variegatus
ENSGALG00000026081	RBM38	99	66.368	ENSDARG00000058818	rbm38	93	65.471	Danio_rerio
ENSGALG00000026081	RBM38	100	79.630	ENSDNOG00000032004	RBM38	100	80.093	Dasypus_novemcinctus
ENSGALG00000026081	RBM38	100	79.358	ENSECAG00000007700	RBM38	90	79.817	Equus_caballus
ENSGALG00000026081	RBM38	100	77.169	ENSEEUG00000013489	RBM38	91	77.626	Erinaceus_europaeus
ENSGALG00000026081	RBM38	100	67.094	ENSELUG00000005849	-	95	66.667	Esox_lucius
ENSGALG00000026081	RBM38	92	64.532	ENSELUG00000000585	-	84	65.285	Esox_lucius
ENSGALG00000026081	RBM38	100	79.817	ENSFCAG00000042916	RBM38	81	93.878	Felis_catus
ENSGALG00000026081	RBM38	80	95.349	ENSFALG00000010805	RBM38	90	95.349	Ficedula_albicollis
ENSGALG00000026081	RBM38	99	58.403	ENSFHEG00000017748	rbm38	92	56.780	Fundulus_heteroclitus
ENSGALG00000026081	RBM38	99	73.148	ENSFHEG00000006160	-	92	71.759	Fundulus_heteroclitus
ENSGALG00000026081	RBM38	84	69.565	ENSGMOG00000016655	-	98	74.054	Gadus_morhua
ENSGALG00000026081	RBM38	100	63.594	ENSGACG00000015224	rbm38	87	68.306	Gasterosteus_aculeatus
ENSGALG00000026081	RBM38	98	69.124	ENSGACG00000009873	-	98	69.725	Gasterosteus_aculeatus
ENSGALG00000026081	RBM38	100	94.419	ENSGAGG00000001187	RBM38	100	94.419	Gopherus_agassizii
ENSGALG00000026081	RBM38	100	59.641	ENSHBUG00000012058	rbm38	92	59.641	Haplochromis_burtoni
ENSGALG00000026081	RBM38	100	69.369	ENSHBUG00000011778	-	94	68.750	Haplochromis_burtoni
ENSGALG00000026081	RBM38	100	75.115	ENSHGLG00000015077	RBM38	90	78.802	Heterocephalus_glaber_female
ENSGALG00000026081	RBM38	91	71.144	ENSHCOG00000005622	-	52	75.806	Hippocampus_comes
ENSGALG00000026081	RBM38	60	71.318	ENSHCOG00000019040	rbm38	55	71.318	Hippocampus_comes
ENSGALG00000026081	RBM38	99	69.196	ENSIPUG00000019349	-	92	67.857	Ictalurus_punctatus
ENSGALG00000026081	RBM38	98	51.261	ENSKMAG00000012402	rbm38	99	50.209	Kryptolebias_marmoratus
ENSGALG00000026081	RBM38	100	68.161	ENSLBEG00000016163	RBM38	94	70.536	Labrus_bergylta
ENSGALG00000026081	RBM38	100	57.563	ENSLBEG00000018878	rbm38	93	56.540	Labrus_bergylta
ENSGALG00000026081	RBM38	100	73.991	ENSLOCG00000003456	rbm38	94	73.991	Lepisosteus_oculatus
ENSGALG00000026081	RBM38	100	79.358	ENSMFAG00000043808	RBM38	81	94.898	Macaca_fascicularis
ENSGALG00000026081	RBM38	100	79.358	ENSMMUG00000031391	RBM38	81	94.898	Macaca_mulatta
ENSGALG00000026081	RBM38	100	79.358	ENSMNEG00000034683	RBM38	81	94.898	Macaca_nemestrina
ENSGALG00000026081	RBM38	52	76.577	ENSMLEG00000043261	-	90	76.577	Mandrillus_leucophaeus
ENSGALG00000026081	RBM38	99	66.522	ENSMAMG00000020499	RBM38	93	67.100	Mastacembelus_armatus
ENSGALG00000026081	RBM38	100	58.824	ENSMAMG00000024135	rbm38	93	58.403	Mastacembelus_armatus
ENSGALG00000026081	RBM38	100	69.369	ENSMZEG00005000849	-	94	68.750	Maylandia_zebra
ENSGALG00000026081	RBM38	100	56.723	ENSMZEG00005026036	rbm38	93	56.723	Maylandia_zebra
ENSGALG00000026081	RBM38	100	77.064	ENSMAUG00000021211	Rbm38	91	77.523	Mesocricetus_auratus
ENSGALG00000026081	RBM38	100	80.734	ENSMICG00000038011	RBM38	100	80.734	Microcebus_murinus
ENSGALG00000026081	RBM38	100	77.523	ENSMOCG00000008715	Rbm38	91	77.982	Microtus_ochrogaster
ENSGALG00000026081	RBM38	100	69.545	ENSMMOG00000020051	-	93	70.136	Mola_mola
ENSGALG00000026081	RBM38	100	90.233	ENSMODG00000016458	RBM38	92	90.233	Monodelphis_domestica
ENSGALG00000026081	RBM38	84	75.806	ENSMALG00000004680	RBM38	69	75.806	Monopterus_albus
ENSGALG00000026081	RBM38	100	55.656	ENSMALG00000022327	rbm38	67	68.387	Monopterus_albus
ENSGALG00000026081	RBM38	100	76.147	MGP_CAROLIEiJ_G0024745	Rbm38	91	79.358	Mus_caroli
ENSGALG00000026081	RBM38	100	76.147	ENSMUSG00000027510	Rbm38	91	79.358	Mus_musculus
ENSGALG00000026081	RBM38	100	75.688	MGP_PahariEiJ_G0026186	Rbm38	91	78.899	Mus_pahari
ENSGALG00000026081	RBM38	100	75.688	MGP_SPRETEiJ_G0025665	Rbm38	91	78.899	Mus_spretus
ENSGALG00000026081	RBM38	84	84.239	ENSMPUG00000006518	RBM38	93	82.979	Mustela_putorius_furo
ENSGALG00000026081	RBM38	100	77.523	ENSMLUG00000011140	RBM38	100	77.064	Myotis_lucifugus
ENSGALG00000026081	RBM38	100	60.268	ENSNBRG00000022685	rbm38	91	60.268	Neolamprologus_brichardi
ENSGALG00000026081	RBM38	100	67.094	ENSNBRG00000022545	-	95	65.957	Neolamprologus_brichardi
ENSGALG00000026081	RBM38	53	88.696	ENSMEUG00000005475	-	86	88.696	Notamacropus_eugenii
ENSGALG00000026081	RBM38	100	79.358	ENSODEG00000007980	RBM38	90	79.358	Octodon_degus
ENSGALG00000026081	RBM38	99	56.962	ENSONIG00000017073	rbm38	95	56.962	Oreochromis_niloticus
ENSGALG00000026081	RBM38	99	66.953	ENSONIG00000020324	-	95	65.812	Oreochromis_niloticus
ENSGALG00000026081	RBM38	100	88.837	ENSOANG00000009259	RBM38	83	87.907	Ornithorhynchus_anatinus
ENSGALG00000026081	RBM38	100	61.765	ENSORLG00000027180	-	95	64.979	Oryzias_latipes
ENSGALG00000026081	RBM38	100	55.649	ENSORLG00000012154	rbm38	93	56.067	Oryzias_latipes
ENSGALG00000026081	RBM38	100	55.833	ENSORLG00020017871	rbm38	93	56.250	Oryzias_latipes_hni
ENSGALG00000026081	RBM38	100	61.765	ENSORLG00020020751	-	95	64.979	Oryzias_latipes_hni
ENSGALG00000026081	RBM38	98	58.796	ENSORLG00015012606	rbm38	93	56.067	Oryzias_latipes_hsok
ENSGALG00000026081	RBM38	100	62.025	ENSORLG00015017040	-	95	64.831	Oryzias_latipes_hsok
ENSGALG00000026081	RBM38	100	54.812	ENSOMEG00000006805	rbm38	93	55.230	Oryzias_melastigma
ENSGALG00000026081	RBM38	100	63.559	ENSOMEG00000023912	-	95	66.809	Oryzias_melastigma
ENSGALG00000026081	RBM38	100	79.358	ENSOGAG00000029136	RBM38	90	79.358	Otolemur_garnettii
ENSGALG00000026081	RBM38	100	79.817	ENSPPRG00000009507	RBM38	81	93.878	Panthera_pardus
ENSGALG00000026081	RBM38	60	89.062	ENSPTRG00000045845	-	70	89.062	Pan_troglodytes
ENSGALG00000026081	RBM38	89	81.538	ENSPTRG00000013661	RBM38	81	94.898	Pan_troglodytes
ENSGALG00000026081	RBM38	100	79.358	ENSPANG00000020919	-	81	94.898	Papio_anubis
ENSGALG00000026081	RBM38	98	66.355	ENSPANG00000033127	-	91	64.953	Papio_anubis
ENSGALG00000026081	RBM38	99	67.890	ENSPKIG00000018122	-	95	87.387	Paramormyrops_kingsleyae
ENSGALG00000026081	RBM38	100	65.801	ENSPKIG00000025417	rbm38	95	65.368	Paramormyrops_kingsleyae
ENSGALG00000026081	RBM38	100	93.023	ENSPSIG00000011649	RBM38	92	93.023	Pelodiscus_sinensis
ENSGALG00000026081	RBM38	100	56.303	ENSPMGG00000011343	rbm38	75	64.021	Periophthalmus_magnuspinnatus
ENSGALG00000026081	RBM38	99	61.966	ENSPMGG00000017094	-	93	63.519	Periophthalmus_magnuspinnatus
ENSGALG00000026081	RBM38	100	88.837	ENSPCIG00000013648	RBM38	92	88.837	Phascolarctos_cinereus
ENSGALG00000026081	RBM38	84	62.567	ENSPFOG00000011658	rbm38	92	55.932	Poecilia_formosa
ENSGALG00000026081	RBM38	84	60.963	ENSPLAG00000005218	rbm38	92	55.932	Poecilia_latipinna
ENSGALG00000026081	RBM38	99	67.094	ENSPLAG00000002500	-	93	66.667	Poecilia_latipinna
ENSGALG00000026081	RBM38	84	62.567	ENSPMEG00000015770	rbm38	92	55.932	Poecilia_mexicana
ENSGALG00000026081	RBM38	84	63.102	ENSPREG00000007398	rbm38	92	56.356	Poecilia_reticulata
ENSGALG00000026081	RBM38	100	80.734	ENSPCOG00000026201	RBM38	80	94.898	Propithecus_coquereli
ENSGALG00000026081	RBM38	100	52.294	ENSPVAG00000006457	RBM38	91	52.752	Pteropus_vampyrus
ENSGALG00000026081	RBM38	100	69.369	ENSPNYG00000019727	-	100	85.470	Pundamilia_nyererei
ENSGALG00000026081	RBM38	100	59.276	ENSPNYG00000021373	rbm38	92	59.276	Pundamilia_nyererei
ENSGALG00000026081	RBM38	99	69.369	ENSPNAG00000015123	-	96	73.485	Pygocentrus_nattereri
ENSGALG00000026081	RBM38	97	65.297	ENSPNAG00000010596	rbm38	77	72.043	Pygocentrus_nattereri
ENSGALG00000026081	RBM38	100	78.899	ENSRNOG00000006420	Rbm38	91	78.440	Rattus_norvegicus
ENSGALG00000026081	RBM38	100	65.596	ENSRROG00000036388	-	89	65.138	Rhinopithecus_roxellana
ENSGALG00000026081	RBM38	100	79.358	ENSSBOG00000031053	RBM38	92	94.898	Saimiri_boliviensis_boliviensis
ENSGALG00000026081	RBM38	98	64.091	ENSSFOG00015004453	rbm38	92	67.873	Scleropages_formosus
ENSGALG00000026081	RBM38	100	58.824	ENSSDUG00000022611	rbm38	93	58.228	Seriola_dumerili
ENSGALG00000026081	RBM38	99	67.672	ENSSDUG00000021082	RBM38	93	67.241	Seriola_dumerili
ENSGALG00000026081	RBM38	99	67.672	ENSSLDG00000011778	RBM38	93	67.241	Seriola_lalandi_dorsalis
ENSGALG00000026081	RBM38	100	62.332	ENSSLDG00000010845	rbm38	92	61.261	Seriola_lalandi_dorsalis
ENSGALG00000026081	RBM38	99	67.757	ENSSPAG00000020989	RBM38	92	70.233	Stegastes_partitus
ENSGALG00000026081	RBM38	100	57.983	ENSSPAG00000011113	rbm38	93	57.983	Stegastes_partitus
ENSGALG00000026081	RBM38	100	80.734	ENSSSCG00000007504	RBM38	90	80.734	Sus_scrofa
ENSGALG00000026081	RBM38	100	63.291	ENSTRUG00000019869	-	95	64.831	Takifugu_rubripes
ENSGALG00000026081	RBM38	100	58.475	ENSTRUG00000024954	rbm38	93	58.475	Takifugu_rubripes
ENSGALG00000026081	RBM38	100	66.372	ENSTNIG00000007093	-	100	68.282	Tetraodon_nigroviridis
ENSGALG00000026081	RBM38	100	79.817	ENSUAMG00000019780	RBM38	90	79.817	Ursus_americanus
ENSGALG00000026081	RBM38	100	81.193	ENSVVUG00000017246	RBM38	90	81.193	Vulpes_vulpes
ENSGALG00000026081	RBM38	100	82.192	ENSXETG00000011268	rbm38	99	82.192	Xenopus_tropicalis
ENSGALG00000026081	RBM38	53	84.746	ENSXCOG00000017324	-	54	84.746	Xiphophorus_couchianus
ENSGALG00000026081	RBM38	84	63.441	ENSXMAG00000023662	rbm38	92	56.170	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0003730	mRNA 3'-UTR binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	IEA	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0006397	mRNA processing	21873635.	IBA	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0010830	regulation of myotube differentiation	-	IEA	Process
GO:0030154	cell differentiation	-	IEA	Process
GO:0043484	regulation of RNA splicing	-	IEA	Process
GO:0070935	3'-UTR-mediated mRNA stabilization	21873635.	IBA	Process
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component